| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputGB1_3285 |
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| Symbol | |
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| ID | 5871070 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida GB-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010322 |
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| Strand | + |
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| Start bp | 3684779 |
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| End bp | 3686284 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641548401 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_001669513 |
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| Protein GI | 167034282 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 0.791434 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAACCGA TATCCACCGA TACCTCCCCC GCCGCAACGG ACGCGCAAAC CTCCATCCCA
CTGCTGCTGG CAGCCCTGAT GCTGGTGATG TTCCTGGCCG CACTCGACCA GACCATCGTA
TCGACCGCGC TGCCCACCAT CGTCAGCGAC CTGGGTGGGT TGCGCTGGCT GTCCTGGGTG
GTCACCGCTT ACCTGCTGGC CTCCACGGTG GTGGTGCCAC TGTATGGCAA GTTCGGCGAC
CAGTTCGGCC GCAAGCGTGT GCTTCAGGTC GCCATCGTGG TGTTCCTGCT GGGTTCGGCG
TTGTGTGGCG CAGCGCAGAC CATGGCCCAG CTGATTGCCT TTCGTACCCT GCAGGGATTG
GGCGGTGGTG GCCTGATGGT GGTGGCGATG GCCGCGATCG GCGATGTCAT CCCGCCCGCC
GAACGTGGCC GCTACCAAGG CCTGTTCGGT GGCGTGTTCG GCCTCGCCAC AGTGGTCGGG
CCACTGATCG GCGGTTTCCT GGTCGAGCAC CTGTCCTGGC ATTGGATTTT CTACATCAAC
CTGCCGCTGG GCCTGTTGGC GCTGTTGGTG ATCGGCAGCG TGTTTCGCCC GCATGTGGCC
CTGGTGCGGC ATGAGGTGGA CTACATCGGT GCATTCTTCC TCACCGTGGC ACTGGGTGCC
CTGGTGCTCA TCACCAGCCT GGGCGGCAGC CTGCTGGCGT GGCAGTCACT GGACATGCTG
TGCCTGTCGC TGTTCGCCCT GATCGGCCTG GTCGGTTTCG TCCTCGAGCA ACGCCGCGCC
GCAGAGCCGA TCATGCCGCT GCACCTGTTC CGCCACCGCA CCTTCGTGCT TGCCGGGCTG
ATCGGTTTTA TCGTCGGGGT ATCGCTGTTC GGCGCGGTTA CCTTCCTGCC GTTGTACATG
CAGGTGGTGA AAGACGCCAC GCCGACCAGT GCCGGGCTGC AGATGCTGCC GTTGATGGGT
GGCCTGCTGG TGGTGTCGGC GATTACCGGG CGACTGATCA GCCGCTGGGG CCGCTACCGG
GTTTTCCCGA TCCTTGGCAC CCTGCTGCAA GTGGTTGCCC TGGGCCTGCT GAGCCGGCTT
GAGCTGGACA CGCCCATGGC GCTGATGAAC CTGTACATGG GCCTTTTGGG CGCCGGCCTG
GGCATGGTCA TGCAGGTGTT GATCCTGGCG GTGCAGAACA GCGTCGAGCC GCGCCATATG
GGCGTGGCCA CCTCCGGGGC GACCTTGTTC CGCTCGATTG GCGGCGCCAT CGGCGTTTCG
CTGTTCGGCG CGTTGTTCTC GCATGCCCTG CTAGGCGGCC TGGCCAGCGA TTTCGCCGCC
AGCGCCGGTG GCCCGGCGAG CCTTTCACCA GCCGCCGTGC ACGCCCTGCC CGCCGCCCTG
CAACACAGTT ACCTGCTGGC GTTTTCCGGG GCGATGCATG GCGTGTTCAT GCTGGCTGGG
GGGATCACCA GCGTGGCCTT CGCACTGTCC TGGTTGCTGC GCGAGGTGCC GCTGCGGCGA
GCCTGA
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| Protein sequence | MQPISTDTSP AATDAQTSIP LLLAALMLVM FLAALDQTIV STALPTIVSD LGGLRWLSWV
VTAYLLASTV VVPLYGKFGD QFGRKRVLQV AIVVFLLGSA LCGAAQTMAQ LIAFRTLQGL
GGGGLMVVAM AAIGDVIPPA ERGRYQGLFG GVFGLATVVG PLIGGFLVEH LSWHWIFYIN
LPLGLLALLV IGSVFRPHVA LVRHEVDYIG AFFLTVALGA LVLITSLGGS LLAWQSLDML
CLSLFALIGL VGFVLEQRRA AEPIMPLHLF RHRTFVLAGL IGFIVGVSLF GAVTFLPLYM
QVVKDATPTS AGLQMLPLMG GLLVVSAITG RLISRWGRYR VFPILGTLLQ VVALGLLSRL
ELDTPMALMN LYMGLLGAGL GMVMQVLILA VQNSVEPRHM GVATSGATLF RSIGGAIGVS
LFGALFSHAL LGGLASDFAA SAGGPASLSP AAVHALPAAL QHSYLLAFSG AMHGVFMLAG
GITSVAFALS WLLREVPLRR A
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