| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bxe_B1779 |
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| Symbol | |
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| ID | 4007728 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia xenovorans LB400 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007952 |
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| Strand | - |
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| Start bp | 1401802 |
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| End bp | 1403364 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637950914 |
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| Product | major facilitator superfamily multidrug efflux transporter |
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| Protein accession | YP_553539 |
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| Protein GI | 91778331 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 0.38448 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000000116602 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | ATGCCAGCCC CCGCTATGGA TCAATCGACC ACGACTCAAC CTGCCGAGCT GACGCAGCGC
GAGGTGCAGG ACAGCCCGCA AGGCGGCACG CAGGCCGGCG ATCATCCGCC GATCCGCCTG
CTGTTCCCGG CGCTGCTGCT GGTGATGCTG CTCGCCGCGC TCGACCAGAC CATCGTCTCG
ACCGCGCTGC CGACCATCGT CGGCGAACTG GGCGGGCTCA ACAACCTGTC ATGGGTGGTG
ACCGCGTACC TGCTCAGCTC GACCATCGTC GTGCCGCTGT ACGGCAAGTT CGGCGATCTG
TTCGGCCGCA AGATCGTGCT GCAGACGGCG ATCATCGTGT TCCTCGTGGG CTCCGCGTTG
TGCGGCGTCG CGCAGGACAT GACGCAGCTC ATCGTGCTGC GCGCGTTGCA GGGTCTCGGC
GGCGGCGGCT TGCTGGTGGT CACGATGGCC GCCATCGCGG ACGTGATTCC GCCGGCTGAA
CGCGGCCGCT ATCAGGGCGT GTTCGGCGGC GTGTTCGGTC TCGCGACCGT GGTCGGCCCA
TTGCTCGGCG GCTTTCTCGT CGAACATCTG ACGTGGCGCT GGATTTTCTA CATCAATCTG
CCGCTCGGCA TCGTCTCGCT CGTCGTGATC GGCGCGGTGT TCAAGCCGCA CGTTCGCCAC
GTGAAGCACA CCATCGACTA CATGGGCGCC GCATTTCTCG CCGGCGCCCT CACCTGCATC
ATCCTGTTCA CGAGCCAGGG CGGCACGATC CTGCCGTGGT CGTCGGCGCA ATTGTGGTTC
ACGCTGGGCA TGGGGCTGGT GGCGATCTGG GGCTTCATTC ACGAGGAACG CAGCGCGGTC
GAACCGATCA TGCCGCTGGA ACTCTTCAGG CAACGCACGT TTTTGCTGAG CAGTCTGATC
GGCTTCATCA TCGGCGTGTC GCTGTTCGGC TCGGTGACGT TCCTGCCGTT GTATCTGCAG
GTCGTCAAAG GCTCCACGCC ATCGCAAGCC GGCATGCAGA TGCTGCCGAT GATGGGCGGC
CTGTTCGTCA TGTCGATGGT GACCGGCCGC GTGATCAGCA AGATCGGCAA ATATCGCATG
TTCCCGATCG CCGGAACCCT GCTCGTGGCA GTCGCGATGC TGATGCTTGC GCGCCTGCAG
ATCAGTACGC CGATTCATGT GATGTATATC GACATGGGCA TTCTCGGCTG CGGGCTCGGC
ATGGTGATGC AGGTGCTGAT TCTCGCCGTA CAGAACACCG TCGAGTTCAG GCATATGGGC
GTGGCAACTT CAGGCGCGAC ACTGTTCCGT TCGATCGGCG GCTCGATCGG CGTGGCGGGC
TTCGGCGCCG TGTTCTCGAA CGGTCTCGCC GCGCGTCTGG AAAAGCTGAT CCCGCCGGAT
ACGGAATTGC CGCACGCGCT TGGGCCCGCC GCGATCCATC AGTTGCCGCA AGCATTGCGC
GACGATTATC TGCAAGCGTT CGCGGGTGCA TTGCACACCG TTTATCTTTC GGCTGCATGC
GTGGTGGTAC TGGCGTTCGC GCTCGCATGG CTGCTGAAGG ATCATCCGCT GCGCAAGCAT
TGA
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| Protein sequence | MPAPAMDQST TTQPAELTQR EVQDSPQGGT QAGDHPPIRL LFPALLLVML LAALDQTIVS
TALPTIVGEL GGLNNLSWVV TAYLLSSTIV VPLYGKFGDL FGRKIVLQTA IIVFLVGSAL
CGVAQDMTQL IVLRALQGLG GGGLLVVTMA AIADVIPPAE RGRYQGVFGG VFGLATVVGP
LLGGFLVEHL TWRWIFYINL PLGIVSLVVI GAVFKPHVRH VKHTIDYMGA AFLAGALTCI
ILFTSQGGTI LPWSSAQLWF TLGMGLVAIW GFIHEERSAV EPIMPLELFR QRTFLLSSLI
GFIIGVSLFG SVTFLPLYLQ VVKGSTPSQA GMQMLPMMGG LFVMSMVTGR VISKIGKYRM
FPIAGTLLVA VAMLMLARLQ ISTPIHVMYI DMGILGCGLG MVMQVLILAV QNTVEFRHMG
VATSGATLFR SIGGSIGVAG FGAVFSNGLA ARLEKLIPPD TELPHALGPA AIHQLPQALR
DDYLQAFAGA LHTVYLSAAC VVVLAFALAW LLKDHPLRKH
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