Gene Bxe_B1779 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBxe_B1779 
Symbol 
ID4007728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia xenovorans LB400 
KingdomBacteria 
Replicon accessionNC_007952 
Strand
Start bp1401802 
End bp1403364 
Gene Length1563 bp 
Protein Length520 aa 
Translation table11 
GC content63% 
IMG OID637950914 
Productmajor facilitator superfamily multidrug efflux transporter 
Protein accessionYP_553539 
Protein GI91778331 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.38448 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000000116602 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGCCAGCCC CCGCTATGGA TCAATCGACC ACGACTCAAC CTGCCGAGCT GACGCAGCGC 
GAGGTGCAGG ACAGCCCGCA AGGCGGCACG CAGGCCGGCG ATCATCCGCC GATCCGCCTG
CTGTTCCCGG CGCTGCTGCT GGTGATGCTG CTCGCCGCGC TCGACCAGAC CATCGTCTCG
ACCGCGCTGC CGACCATCGT CGGCGAACTG GGCGGGCTCA ACAACCTGTC ATGGGTGGTG
ACCGCGTACC TGCTCAGCTC GACCATCGTC GTGCCGCTGT ACGGCAAGTT CGGCGATCTG
TTCGGCCGCA AGATCGTGCT GCAGACGGCG ATCATCGTGT TCCTCGTGGG CTCCGCGTTG
TGCGGCGTCG CGCAGGACAT GACGCAGCTC ATCGTGCTGC GCGCGTTGCA GGGTCTCGGC
GGCGGCGGCT TGCTGGTGGT CACGATGGCC GCCATCGCGG ACGTGATTCC GCCGGCTGAA
CGCGGCCGCT ATCAGGGCGT GTTCGGCGGC GTGTTCGGTC TCGCGACCGT GGTCGGCCCA
TTGCTCGGCG GCTTTCTCGT CGAACATCTG ACGTGGCGCT GGATTTTCTA CATCAATCTG
CCGCTCGGCA TCGTCTCGCT CGTCGTGATC GGCGCGGTGT TCAAGCCGCA CGTTCGCCAC
GTGAAGCACA CCATCGACTA CATGGGCGCC GCATTTCTCG CCGGCGCCCT CACCTGCATC
ATCCTGTTCA CGAGCCAGGG CGGCACGATC CTGCCGTGGT CGTCGGCGCA ATTGTGGTTC
ACGCTGGGCA TGGGGCTGGT GGCGATCTGG GGCTTCATTC ACGAGGAACG CAGCGCGGTC
GAACCGATCA TGCCGCTGGA ACTCTTCAGG CAACGCACGT TTTTGCTGAG CAGTCTGATC
GGCTTCATCA TCGGCGTGTC GCTGTTCGGC TCGGTGACGT TCCTGCCGTT GTATCTGCAG
GTCGTCAAAG GCTCCACGCC ATCGCAAGCC GGCATGCAGA TGCTGCCGAT GATGGGCGGC
CTGTTCGTCA TGTCGATGGT GACCGGCCGC GTGATCAGCA AGATCGGCAA ATATCGCATG
TTCCCGATCG CCGGAACCCT GCTCGTGGCA GTCGCGATGC TGATGCTTGC GCGCCTGCAG
ATCAGTACGC CGATTCATGT GATGTATATC GACATGGGCA TTCTCGGCTG CGGGCTCGGC
ATGGTGATGC AGGTGCTGAT TCTCGCCGTA CAGAACACCG TCGAGTTCAG GCATATGGGC
GTGGCAACTT CAGGCGCGAC ACTGTTCCGT TCGATCGGCG GCTCGATCGG CGTGGCGGGC
TTCGGCGCCG TGTTCTCGAA CGGTCTCGCC GCGCGTCTGG AAAAGCTGAT CCCGCCGGAT
ACGGAATTGC CGCACGCGCT TGGGCCCGCC GCGATCCATC AGTTGCCGCA AGCATTGCGC
GACGATTATC TGCAAGCGTT CGCGGGTGCA TTGCACACCG TTTATCTTTC GGCTGCATGC
GTGGTGGTAC TGGCGTTCGC GCTCGCATGG CTGCTGAAGG ATCATCCGCT GCGCAAGCAT
TGA
 
Protein sequence
MPAPAMDQST TTQPAELTQR EVQDSPQGGT QAGDHPPIRL LFPALLLVML LAALDQTIVS 
TALPTIVGEL GGLNNLSWVV TAYLLSSTIV VPLYGKFGDL FGRKIVLQTA IIVFLVGSAL
CGVAQDMTQL IVLRALQGLG GGGLLVVTMA AIADVIPPAE RGRYQGVFGG VFGLATVVGP
LLGGFLVEHL TWRWIFYINL PLGIVSLVVI GAVFKPHVRH VKHTIDYMGA AFLAGALTCI
ILFTSQGGTI LPWSSAQLWF TLGMGLVAIW GFIHEERSAV EPIMPLELFR QRTFLLSSLI
GFIIGVSLFG SVTFLPLYLQ VVKGSTPSQA GMQMLPMMGG LFVMSMVTGR VISKIGKYRM
FPIAGTLLVA VAMLMLARLQ ISTPIHVMYI DMGILGCGLG MVMQVLILAV QNTVEFRHMG
VATSGATLFR SIGGSIGVAG FGAVFSNGLA ARLEKLIPPD TELPHALGPA AIHQLPQALR
DDYLQAFAGA LHTVYLSAAC VVVLAFALAW LLKDHPLRKH