Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bxe_B1779 |
Symbol | |
ID | 4007728 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia xenovorans LB400 |
Kingdom | Bacteria |
Replicon accession | NC_007952 |
Strand | - |
Start bp | 1401802 |
End bp | 1403364 |
Gene Length | 1563 bp |
Protein Length | 520 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637950914 |
Product | major facilitator superfamily multidrug efflux transporter |
Protein accession | YP_553539 |
Protein GI | 91778331 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 0.38448 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.00000000116602 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGCCAGCCC CCGCTATGGA TCAATCGACC ACGACTCAAC CTGCCGAGCT GACGCAGCGC GAGGTGCAGG ACAGCCCGCA AGGCGGCACG CAGGCCGGCG ATCATCCGCC GATCCGCCTG CTGTTCCCGG CGCTGCTGCT GGTGATGCTG CTCGCCGCGC TCGACCAGAC CATCGTCTCG ACCGCGCTGC CGACCATCGT CGGCGAACTG GGCGGGCTCA ACAACCTGTC ATGGGTGGTG ACCGCGTACC TGCTCAGCTC GACCATCGTC GTGCCGCTGT ACGGCAAGTT CGGCGATCTG TTCGGCCGCA AGATCGTGCT GCAGACGGCG ATCATCGTGT TCCTCGTGGG CTCCGCGTTG TGCGGCGTCG CGCAGGACAT GACGCAGCTC ATCGTGCTGC GCGCGTTGCA GGGTCTCGGC GGCGGCGGCT TGCTGGTGGT CACGATGGCC GCCATCGCGG ACGTGATTCC GCCGGCTGAA CGCGGCCGCT ATCAGGGCGT GTTCGGCGGC GTGTTCGGTC TCGCGACCGT GGTCGGCCCA TTGCTCGGCG GCTTTCTCGT CGAACATCTG ACGTGGCGCT GGATTTTCTA CATCAATCTG CCGCTCGGCA TCGTCTCGCT CGTCGTGATC GGCGCGGTGT TCAAGCCGCA CGTTCGCCAC GTGAAGCACA CCATCGACTA CATGGGCGCC GCATTTCTCG CCGGCGCCCT CACCTGCATC ATCCTGTTCA CGAGCCAGGG CGGCACGATC CTGCCGTGGT CGTCGGCGCA ATTGTGGTTC ACGCTGGGCA TGGGGCTGGT GGCGATCTGG GGCTTCATTC ACGAGGAACG CAGCGCGGTC GAACCGATCA TGCCGCTGGA ACTCTTCAGG CAACGCACGT TTTTGCTGAG CAGTCTGATC GGCTTCATCA TCGGCGTGTC GCTGTTCGGC TCGGTGACGT TCCTGCCGTT GTATCTGCAG GTCGTCAAAG GCTCCACGCC ATCGCAAGCC GGCATGCAGA TGCTGCCGAT GATGGGCGGC CTGTTCGTCA TGTCGATGGT GACCGGCCGC GTGATCAGCA AGATCGGCAA ATATCGCATG TTCCCGATCG CCGGAACCCT GCTCGTGGCA GTCGCGATGC TGATGCTTGC GCGCCTGCAG ATCAGTACGC CGATTCATGT GATGTATATC GACATGGGCA TTCTCGGCTG CGGGCTCGGC ATGGTGATGC AGGTGCTGAT TCTCGCCGTA CAGAACACCG TCGAGTTCAG GCATATGGGC GTGGCAACTT CAGGCGCGAC ACTGTTCCGT TCGATCGGCG GCTCGATCGG CGTGGCGGGC TTCGGCGCCG TGTTCTCGAA CGGTCTCGCC GCGCGTCTGG AAAAGCTGAT CCCGCCGGAT ACGGAATTGC CGCACGCGCT TGGGCCCGCC GCGATCCATC AGTTGCCGCA AGCATTGCGC GACGATTATC TGCAAGCGTT CGCGGGTGCA TTGCACACCG TTTATCTTTC GGCTGCATGC GTGGTGGTAC TGGCGTTCGC GCTCGCATGG CTGCTGAAGG ATCATCCGCT GCGCAAGCAT TGA
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Protein sequence | MPAPAMDQST TTQPAELTQR EVQDSPQGGT QAGDHPPIRL LFPALLLVML LAALDQTIVS TALPTIVGEL GGLNNLSWVV TAYLLSSTIV VPLYGKFGDL FGRKIVLQTA IIVFLVGSAL CGVAQDMTQL IVLRALQGLG GGGLLVVTMA AIADVIPPAE RGRYQGVFGG VFGLATVVGP LLGGFLVEHL TWRWIFYINL PLGIVSLVVI GAVFKPHVRH VKHTIDYMGA AFLAGALTCI ILFTSQGGTI LPWSSAQLWF TLGMGLVAIW GFIHEERSAV EPIMPLELFR QRTFLLSSLI GFIIGVSLFG SVTFLPLYLQ VVKGSTPSQA GMQMLPMMGG LFVMSMVTGR VISKIGKYRM FPIAGTLLVA VAMLMLARLQ ISTPIHVMYI DMGILGCGLG MVMQVLILAV QNTVEFRHMG VATSGATLFR SIGGSIGVAG FGAVFSNGLA ARLEKLIPPD TELPHALGPA AIHQLPQALR DDYLQAFAGA LHTVYLSAAC VVVLAFALAW LLKDHPLRKH
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