| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_0662 |
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| Symbol | |
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| ID | 8331992 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 770037 |
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| End bp | 771614 |
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| Gene Length | 1578 bp |
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| Protein Length | 525 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644953815 |
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| Product | drug resistance transporter, EmrB/QacA subfamily |
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| Protein accession | YP_003111439 |
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| Protein GI | 256389875 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCACA AGCAGATCCT GGTGGTCTTC GGCTCGTTGA TGCTGGGCCT GCTCCTGGCC
TCGCTGGACA ACACGATCGT CAGCACGGCG ATCCGCACGA TCATCGGTGA CATCGGCGGC
CAGAACGGCC TCGCGCGCAT GCCGTGGGTG ACCACCGCCT ACGTGCTGGC GTCCACCGCC
GCGACCCCGA TCTACGGCAA GCTCTCCGAC CTGTTCGGCC GCAAGCCGTT GTACATGACG
GCGATCGTGC TGTTCCTGAC CGGCTCGGCA CTGTCCGGCC TGTCGCAGAA CCTGAACGAG
CTCATCGCCT TCCGCGCGCT GCAGGGCCTG GGCGCCGGAG GCATCCTGGG CCTGACGTTC
GCCATCGTCG GCGACGTGGT CCCGCCCCGC GAGCGCGGCA AGTACCAAGG TCTGTTCGGC
GGCGTGTTCA TGCTGGCGAT GGTGGCCGGC CCGCTGCTCG GCGGCATCTT CACCGAGCAC
AACTCGATCA TCGGCATCAC CGGCTGGCGC TGGGTGTTCT ACGTCAACCT GCCGATCGGC
ATCATCGCGC TGTTCGTCAT CAGCGCCGTG CTGCACCTGC CCAAGCGGCG GGTGAAGGCG
ACCATCGACT ACATCGGCGC GACGCTGGTC GTGGCCGGCG TGGTGTGCCT GCTGCTGGCG
GCGCAGATGG GCGGCCAGCA GTACGCGTGG GGCTCCCCGG TCATCATCGG CCTGGCGATC
GTCGGCGTGG TGGTCCTGGT GGGCTTCGTC TTGTGGGAGA TCCGCACGCC CGAGCCGATC
CTGCCGATGC GCCTGTTCCG CGGCGACGTG TTCCGCGTCT CGAGCATCAT GGGCTTCCTC
ATCGGCATGG TCATGATGGG CGCGATGATG TACATCCCGT TCTACTTCCA GGTCGTGAAC
GGCGACAGCC CGACCAAGGC GGGCCTGCGG ATGCTGCCGA TGATGGTCGG CCTGCTGACC
ACCTCGATCA GCTCCGGCCG TCTGATCAGC CGGACCGGCC GCTACCGGTT CTTCCCGATC
GCCGGCATCG CGGTGACCAC CATCGGCCTC GGCCTGATGA CCACCATGGA CGAGAACACG
ACCTTCTTCA CCGGCGCGCT GTTCATGTTC ATCGTGGGCC TCGGCCTCGG CGCGACGATG
CAGGTGCTGA TCCTGGCCGT GCAGAACGCG GTGGAGATGA AGGACATGGG CGTGGCGACC
ACGTCCTCGA CCTTCTTCCG CTCGCTGGGC CAGACCTTCG GCGCGGCGGT CATGGGCGCG
ATCCTGACCA ACCAGCTCAC CAGCCACCTG AAGACCAACG CCGGCCCGAG CCCGGCCATG
GCGCCGGTCC GCGAGCACGG CATGGCGATC CTGCAGAGCG AGGGCGCGAT GTCCAAGCTG
CCGCAGCCCG TCCAGCACGT GCTGATCCAC TCCTTCACGC AGGCGCTGTC GACGGTGTTC
CTGTTCGGCG CCGCGCTCAG CCTGATCGCG TGGTTCGCCA GCTGGTTCCT GAAGGAGCAC
AAGCTGCGCT CGATGGCTCC CTCGGGCGCC GCGAAGCAGG GCTCCCCTGA CGTGGAGGCA
CCGGCGCTGG CGCACTAG
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| Protein sequence | MSHKQILVVF GSLMLGLLLA SLDNTIVSTA IRTIIGDIGG QNGLARMPWV TTAYVLASTA
ATPIYGKLSD LFGRKPLYMT AIVLFLTGSA LSGLSQNLNE LIAFRALQGL GAGGILGLTF
AIVGDVVPPR ERGKYQGLFG GVFMLAMVAG PLLGGIFTEH NSIIGITGWR WVFYVNLPIG
IIALFVISAV LHLPKRRVKA TIDYIGATLV VAGVVCLLLA AQMGGQQYAW GSPVIIGLAI
VGVVVLVGFV LWEIRTPEPI LPMRLFRGDV FRVSSIMGFL IGMVMMGAMM YIPFYFQVVN
GDSPTKAGLR MLPMMVGLLT TSISSGRLIS RTGRYRFFPI AGIAVTTIGL GLMTTMDENT
TFFTGALFMF IVGLGLGATM QVLILAVQNA VEMKDMGVAT TSSTFFRSLG QTFGAAVMGA
ILTNQLTSHL KTNAGPSPAM APVREHGMAI LQSEGAMSKL PQPVQHVLIH SFTQALSTVF
LFGAALSLIA WFASWFLKEH KLRSMAPSGA AKQGSPDVEA PALAH
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