Gene BTH_II1465 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBTH_II1465 
Symbol 
ID3845179 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia thailandensis E264 
KingdomBacteria 
Replicon accessionNC_007650 
Strand
Start bp1731576 
End bp1733090 
Gene Length1515 bp 
Protein Length504 aa 
Translation table11 
GC content70% 
IMG OID637838767 
ProductEmrB/QacA family drug resistance transporter 
Protein accessionYP_439661 
Protein GI83716888 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily
[TIGR00880] Multidrug resistance protein 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCACCG ACTCCTCCGC GCCGCCCGCC CACGCCGATG CCGGCCGACC GGCCGCGTCC 
GTGCGGCTCA CGATCGCCGC GCTGCTGCTC GTGCTGCTGC TGTCCGCGCT CGACCAGACG
ATCGTGTCGA CCGCGCTGCC GACGATCGTC GGCGACTTGG GCGGGCTCGA GAAGCTGTCC
TGGGTCGTCA CCGCGTACCT GCTGGCGTCG ACCGTCGTGC TGCCGCTGTA CGGCAAGCTC
GGCGACCTGT ACGGGCGCAA GATCGTGCTG CAGGCGGCGA TCGTGTTGTT CGTCGCCGGT
TCGGCGCTGT GCGGGCTCGC GCAGAACATG ACGCAGTTGA TCGTGCTGCG CGCGCTGCAG
GGGCTCGGCG GCGGCGGGCT GATGGTCGTC ACGATGGCGG CGATCGCCGA TCTGATCCCG
CCCGACGAGC GCGGCCGCTA TCAGGGGATG TTCGGCGGCG TGTACGGGAT CGCGACGGTG
ATCGGCCCGC TGCTCGGCGG GTTCCTCGTC CAGCATCTGT CGTGGCGCTG GATCTTCTAC
ATCAACCTGC CGCTCGGCGC GCTCGCGTTC GCGGTGATCG GCGCGGCGTT CAAGCCGCAC
ACCGCGCACG TGCGACACCG GATCGACTAT GCGGGCGCCG CGTTCCTCGC CACGGCGCTC
ACCTGCGTCG TGCTGTTCAC GAGCCAGGGC GGCACGATCC TGCCGTGGTC GTCGCCGCAG
CTGTGGTTCA CGCTCGCGCT CGGCCTCGTC GCGACAGCCG GATTCGTCTA CGAGGAACGC
CTCGCCGCCG AACCGATCAT GCCGCTTGAG CTGTTCCGCC ACCGCACCTT CGTGCTGTGC
TGCCTGATCG GCTTCGTCGT CGGGCTCGCG CTGTTCGGCT CGGTCACGTT CCTGCCGCTC
TATCTGCAGG TCGTCAAGGG CTCGACGCCG TCGGAAGCCG GCATGCAGGT GCTGCCGATG
ATGGGCGGCT TGCTCGCGAC GTCGATCGGC AGCGGCCGCC TGATCACGAA GCTCGGCAAG
TATCGCCTCT TCCCGATCGC GGGCACCTTC GTCGCCGGCG CGGCGATGCT GCTCCTCGCG
ACGCTGTCGC TCGACACGCC GCTGCGCGCG ATGTACCTGT ACATGGCGCT CCTCGGCGGC
GGGCTCGGCA TGGTGATGCC CGTCATCGTG CTCGCGGTGC AAAACACCGT CGAATTCCGG
CATCTGGGCG TCGCGACGTC CGGCGCGACC CTCTTTCGCT CGATCGGCGG CTCGCTCGGT
GTCGCCGCGT TCGGCGCGCT GTTCTCGAAC GGGCTGCACG CGCGGCTCGC CGCAGCGCTG
CCGCCCGATA CGGAACTGCC GCCGTCGCTC GGGCCATCGG CCGTGCGCCA GTTGCCGGAC
GCGGTGCGCA ACGCGTATCT GCATGCGTTC GCAAGCTCGC TGCACACGGT GTATCTGTGC
GCGGCGGCGG TGATCGCGAT CGCCTTCGCG CTCGCGTGGT TCGTCGAAGA CGCGCCGCTC
AGGAAACGCG CGTAA
 
Protein sequence
MPTDSSAPPA HADAGRPAAS VRLTIAALLL VLLLSALDQT IVSTALPTIV GDLGGLEKLS 
WVVTAYLLAS TVVLPLYGKL GDLYGRKIVL QAAIVLFVAG SALCGLAQNM TQLIVLRALQ
GLGGGGLMVV TMAAIADLIP PDERGRYQGM FGGVYGIATV IGPLLGGFLV QHLSWRWIFY
INLPLGALAF AVIGAAFKPH TAHVRHRIDY AGAAFLATAL TCVVLFTSQG GTILPWSSPQ
LWFTLALGLV ATAGFVYEER LAAEPIMPLE LFRHRTFVLC CLIGFVVGLA LFGSVTFLPL
YLQVVKGSTP SEAGMQVLPM MGGLLATSIG SGRLITKLGK YRLFPIAGTF VAGAAMLLLA
TLSLDTPLRA MYLYMALLGG GLGMVMPVIV LAVQNTVEFR HLGVATSGAT LFRSIGGSLG
VAAFGALFSN GLHARLAAAL PPDTELPPSL GPSAVRQLPD AVRNAYLHAF ASSLHTVYLC
AAAVIAIAFA LAWFVEDAPL RKRA