| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_4056 |
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| Symbol | |
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| ID | 4312951 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 976008 |
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| End bp | 977537 |
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| Gene Length | 1530 bp |
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| Protein Length | 509 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638151897 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_775943 |
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| Protein GI | 115358805 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.010273 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.647251 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGATA TCTCGATGAG AACCGATACC CTTCTTGCTC CGCCGGCCGC CGAAGCGGCC
CGCCGCGACA CGCCGACCGG GCTGGTGATC GCCGCGCTGC TGCTCGTCAT GCTGCTGTCC
GCGCTCGACC AGACGATCGT GTCGACCGCG CTGCCGACGA TCGTCGGCGA GCTCGGCGGC
CTCGACCAGC TGTCGTGGGT CGTGACCGCT TACCTGCTGT CGTCGACGGT CGTGCTGCCG
CTGTACGGCA AGCTCGGCGA CCTGTACGGC CGCAAGATCG TGCTGCAGGC CGCGATCGTG
CTGTTTCTCG CCGGCTCCGC GCTGTGCGGC ATCGCGCAGG ACATGACGCA GCTGATCGTG
CTGCGCGCGC TGCAAGGGCT CGGCGGCGGC GGGCTGATGG TCGTGACGAT GGCCGCGATC
GGCGACCTGG TGCCGCCCGA TCGCCGTGCG CGCTACCAGG GGATGTTCGG CGGCGTGTAT
GGCCTCGCGA CGATCGTCGG GCCGCTGCTC GGCGGCTTCC TGGTCGAACA CCTGTCGTGG
CGCTGGATCT TCACGATCAA CCTGCCGCTC GGCGCGCTCG CGCTCGCGGT GATCGGCATC
GTGTTCCGGC CGCACACCGC GCACGTGAAG CACCGCATCG ACTACATGGG CGCCGCGTTC
CTCGCGACGG CCCTCACCTG CGTGATCCTG TTCACCAGCG AAGGCGGTTC GCTGCTGCCG
TGGTCGTCGC CGCAGCTGTG GATGACGCTC GTGCTCGGGC TGGTCGCGCT CGGCGGCTTC
GTCTACGAGG AGCGGCTCGC GGCCGAGCCG ATCATGCCGC TCGAACTGTT CCGCCAGCGC
ACCTTCGTGC TGATGAGCCT GATCGGCTTC GTCGTCGGCA TCGCGCTGTT CGGTTCGGTC
ACGTTCATTC CGCTCTATCT GCAAGTCGTG AAGGGCTCGA CGCCGTCGCA GGCCGGGATG
CAGCTGCTGC CGATGATGGG CGGGATGCTC GCGATGTCGA TCGCGAGCGG CCGGCTGATC
TCGCGGTTCG GCACGTATCG CCCGTTTCCG ATCGCGGGGA CGCTGATCGG CGGCATCGCG
ATGGCGCTGC TGTCGACGCT GTCGCTCGAC ACGCCGCTGC ACACCATGTA CGCATACATG
GCGCTACTCG GGATCGGGCT CGGCATGGTA ATGCCGGTGC TGACGCTCGC CGTGCAGAAC
ACGGTCGAAT TCCGGCACAT GGGTGTCGCG ACGTCGGGTG CGACGCTGTT CCGCTCGATC
GGCGGCTCGC TCGGCGTCGC CGCGTTCGGC GCGCTGTTCT CGCACGGGCT GCAGTCGCGC
CTCGCGCAGG CGCTGCCGGC CGGCACGGAG CTGCCGCCCG CGCTCGGGCC GGCGGCCGTG
CACCAGTTGC CGGAGGCGGT GCGCGCTGCG TACCTGCACG CGTTCGCCGG GTCGCTGCAT
GTGGTGTATC TGTCGGCGGC GGGCGTGATC GCGATCGCCT TCGTGCTCGC ATGGTTCGTC
CAGAGTGCGC CGCTGCGCAC GCATCACTGA
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| Protein sequence | MADISMRTDT LLAPPAAEAA RRDTPTGLVI AALLLVMLLS ALDQTIVSTA LPTIVGELGG
LDQLSWVVTA YLLSSTVVLP LYGKLGDLYG RKIVLQAAIV LFLAGSALCG IAQDMTQLIV
LRALQGLGGG GLMVVTMAAI GDLVPPDRRA RYQGMFGGVY GLATIVGPLL GGFLVEHLSW
RWIFTINLPL GALALAVIGI VFRPHTAHVK HRIDYMGAAF LATALTCVIL FTSEGGSLLP
WSSPQLWMTL VLGLVALGGF VYEERLAAEP IMPLELFRQR TFVLMSLIGF VVGIALFGSV
TFIPLYLQVV KGSTPSQAGM QLLPMMGGML AMSIASGRLI SRFGTYRPFP IAGTLIGGIA
MALLSTLSLD TPLHTMYAYM ALLGIGLGMV MPVLTLAVQN TVEFRHMGVA TSGATLFRSI
GGSLGVAAFG ALFSHGLQSR LAQALPAGTE LPPALGPAAV HQLPEAVRAA YLHAFAGSLH
VVYLSAAGVI AIAFVLAWFV QSAPLRTHH
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