Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_4056 |
Symbol | |
ID | 4312951 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | + |
Start bp | 976008 |
End bp | 977537 |
Gene Length | 1530 bp |
Protein Length | 509 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638151897 |
Product | EmrB/QacA family drug resistance transporter |
Protein accession | YP_775943 |
Protein GI | 115358805 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.010273 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.647251 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGATA TCTCGATGAG AACCGATACC CTTCTTGCTC CGCCGGCCGC CGAAGCGGCC CGCCGCGACA CGCCGACCGG GCTGGTGATC GCCGCGCTGC TGCTCGTCAT GCTGCTGTCC GCGCTCGACC AGACGATCGT GTCGACCGCG CTGCCGACGA TCGTCGGCGA GCTCGGCGGC CTCGACCAGC TGTCGTGGGT CGTGACCGCT TACCTGCTGT CGTCGACGGT CGTGCTGCCG CTGTACGGCA AGCTCGGCGA CCTGTACGGC CGCAAGATCG TGCTGCAGGC CGCGATCGTG CTGTTTCTCG CCGGCTCCGC GCTGTGCGGC ATCGCGCAGG ACATGACGCA GCTGATCGTG CTGCGCGCGC TGCAAGGGCT CGGCGGCGGC GGGCTGATGG TCGTGACGAT GGCCGCGATC GGCGACCTGG TGCCGCCCGA TCGCCGTGCG CGCTACCAGG GGATGTTCGG CGGCGTGTAT GGCCTCGCGA CGATCGTCGG GCCGCTGCTC GGCGGCTTCC TGGTCGAACA CCTGTCGTGG CGCTGGATCT TCACGATCAA CCTGCCGCTC GGCGCGCTCG CGCTCGCGGT GATCGGCATC GTGTTCCGGC CGCACACCGC GCACGTGAAG CACCGCATCG ACTACATGGG CGCCGCGTTC CTCGCGACGG CCCTCACCTG CGTGATCCTG TTCACCAGCG AAGGCGGTTC GCTGCTGCCG TGGTCGTCGC CGCAGCTGTG GATGACGCTC GTGCTCGGGC TGGTCGCGCT CGGCGGCTTC GTCTACGAGG AGCGGCTCGC GGCCGAGCCG ATCATGCCGC TCGAACTGTT CCGCCAGCGC ACCTTCGTGC TGATGAGCCT GATCGGCTTC GTCGTCGGCA TCGCGCTGTT CGGTTCGGTC ACGTTCATTC CGCTCTATCT GCAAGTCGTG AAGGGCTCGA CGCCGTCGCA GGCCGGGATG CAGCTGCTGC CGATGATGGG CGGGATGCTC GCGATGTCGA TCGCGAGCGG CCGGCTGATC TCGCGGTTCG GCACGTATCG CCCGTTTCCG ATCGCGGGGA CGCTGATCGG CGGCATCGCG ATGGCGCTGC TGTCGACGCT GTCGCTCGAC ACGCCGCTGC ACACCATGTA CGCATACATG GCGCTACTCG GGATCGGGCT CGGCATGGTA ATGCCGGTGC TGACGCTCGC CGTGCAGAAC ACGGTCGAAT TCCGGCACAT GGGTGTCGCG ACGTCGGGTG CGACGCTGTT CCGCTCGATC GGCGGCTCGC TCGGCGTCGC CGCGTTCGGC GCGCTGTTCT CGCACGGGCT GCAGTCGCGC CTCGCGCAGG CGCTGCCGGC CGGCACGGAG CTGCCGCCCG CGCTCGGGCC GGCGGCCGTG CACCAGTTGC CGGAGGCGGT GCGCGCTGCG TACCTGCACG CGTTCGCCGG GTCGCTGCAT GTGGTGTATC TGTCGGCGGC GGGCGTGATC GCGATCGCCT TCGTGCTCGC ATGGTTCGTC CAGAGTGCGC CGCTGCGCAC GCATCACTGA
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Protein sequence | MADISMRTDT LLAPPAAEAA RRDTPTGLVI AALLLVMLLS ALDQTIVSTA LPTIVGELGG LDQLSWVVTA YLLSSTVVLP LYGKLGDLYG RKIVLQAAIV LFLAGSALCG IAQDMTQLIV LRALQGLGGG GLMVVTMAAI GDLVPPDRRA RYQGMFGGVY GLATIVGPLL GGFLVEHLSW RWIFTINLPL GALALAVIGI VFRPHTAHVK HRIDYMGAAF LATALTCVIL FTSEGGSLLP WSSPQLWMTL VLGLVALGGF VYEERLAAEP IMPLELFRQR TFVLMSLIGF VVGIALFGSV TFIPLYLQVV KGSTPSQAGM QLLPMMGGML AMSIASGRLI SRFGTYRPFP IAGTLIGGIA MALLSTLSLD TPLHTMYAYM ALLGIGLGMV MPVLTLAVQN TVEFRHMGVA TSGATLFRSI GGSLGVAAFG ALFSHGLQSR LAQALPAGTE LPPALGPAAV HQLPEAVRAA YLHAFAGSLH VVYLSAAGVI AIAFVLAWFV QSAPLRTHH
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