Gene BMA10247_A1016 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMA10247_A1016 
Symbol 
ID4890285 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei NCTC 10247 
KingdomBacteria 
Replicon accessionNC_009079 
Strand
Start bp958740 
End bp960254 
Gene Length1515 bp 
Protein Length504 aa 
Translation table11 
GC content70% 
IMG OID640147289 
ProductEmrB/QacA family drug resistance transporter 
Protein accessionYP_001078208 
Protein GI126447847 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.80336 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCCCCG ATTCCTCCGC GCCGCCCGCC CATGCCGATG CCGGCCGTCC GGTCGCGTCC 
GTGCGGCTCA CGATCGCCGC GCTGCTGCTC GTGCTGCTGT TGTCCGCGCT CGACCAGACG
ATCGTGTCGA CCGCGCTGCC GACGATCGTC GGCGACCTGG GCGGCCTCGA GAAGCTGTCG
TGGGTCGTCA CCGCGTACCT GCTGTCGTCG ACCGTCGTGC TGCCGCTGTA CGGCAAGCTC
GGCGATCTGT ACGGGCGCAA GATCGTGCTG CAGGCGGCGA TCGTGCTGTT CGTCGTCGGC
TCGGCGCTTT GCGGGCTCGC GCAGGACATG ACGCAGCTGA TCGTGCTGCG CGCGCTGCAG
GGGCTCGGCG GCGGCGGGCT GATGGTCGTC ACGATGGCGG CGATCGCCGA TCTGATTCCG
CCCGACGAGC GCGGCCGCTA CCAGGGGATG TTCGGCGGCG TGTACGGGAT CGCGACCGTG
ATCGGGCCGC TGCTCGGCGG GTTTCTCGTC CAGCATCTGT CGTGGCGCTG GATCTTCTAC
ATCAACCTGC CGCTCGGCGC GCTCGCGTTC GCGGTGATCG GCGCGGCGTT CAAGCCGCAC
ACCGCGCACG TGCGGCGCCG GATCGACTAC GCGGGCGCCG CGTTCCTCGC CACCGCGCTC
ACCTGCGTCG TGCTGTTCAC GAGCCAGGGC GGCACGATCC TGCCGTGGTC GTCGCCGCAA
CTGTGGTTCA CGCTCGCGCT CGGCCTCGTC GCGACCGCCG GCTTCGTCTA CGAGGAACGC
CTCGCCGCGG AGCCGATCCT GCCGCTCGAG CTGTTTCGCC ACCGCACCTT CGTGCTGTGC
TGCCTGATCG GCTTCGTCGT CGGGCTCGCG CTGTTCGGCT CGGTCACGTT CCTGCCGCTC
TATCTGCAGG TCGTCAAGGG CTCGACGCCG TCGGAAGCCG GCATGCAGGT GCTGCCGATG
ATGGGCGGGC TGCTCGCGAC GTCGATCGGC AGCGGCCGCC TCATCACGAC GCTCGGCAAG
TATCGTCTGT TCCCGATCGC GGGCACCTTC GTCGCCTGCG CGGCGATGCT GCTGCTCGCG
ACGCTGTCGC TCGACACGCC GCTGCGCGCG ATGTACCTGT ACATGGCGCT CCTCGGCGAC
GGGCTCGGCA TGGTGATGCC CGTCATCGTG CTCGCCGTGC AGAACACCGT CGAATTCCGG
CATCTGGGCG TCGCCACGTC CGGCGCAACG CTGTTTCGCT CGATCGGCGA TTCGCTCGGC
GTCGCCGCGT TCGGCGCGCT GTTCTCGAAC GGCCTGCACG CGCGGCTCGC CGCGACGCTG
CCGCCCGACA CGGAGCTGCC GCCGTCGCTC GGGCCGTCGG CCGTGCGCCA ATTGCCGGGC
GCCGTGCGCA GCGCGTATCT GCACGCGTTC GCGAGCTCGC TGCACACGGT GTATCTGTGC
GCGGCCGCGG TGATCGCGAT CGCATTCGCG CTCGCGTGGC TCGTCGAAGA CGCGCCGCTC
AGAAAACGCG CGTAA
 
Protein sequence
MSPDSSAPPA HADAGRPVAS VRLTIAALLL VLLLSALDQT IVSTALPTIV GDLGGLEKLS 
WVVTAYLLSS TVVLPLYGKL GDLYGRKIVL QAAIVLFVVG SALCGLAQDM TQLIVLRALQ
GLGGGGLMVV TMAAIADLIP PDERGRYQGM FGGVYGIATV IGPLLGGFLV QHLSWRWIFY
INLPLGALAF AVIGAAFKPH TAHVRRRIDY AGAAFLATAL TCVVLFTSQG GTILPWSSPQ
LWFTLALGLV ATAGFVYEER LAAEPILPLE LFRHRTFVLC CLIGFVVGLA LFGSVTFLPL
YLQVVKGSTP SEAGMQVLPM MGGLLATSIG SGRLITTLGK YRLFPIAGTF VACAAMLLLA
TLSLDTPLRA MYLYMALLGD GLGMVMPVIV LAVQNTVEFR HLGVATSGAT LFRSIGDSLG
VAAFGALFSN GLHARLAATL PPDTELPPSL GPSAVRQLPG AVRSAYLHAF ASSLHTVYLC
AAAVIAIAFA LAWLVEDAPL RKRA