More than 300 homologs were found in PanDaTox collection
for query gene Strop_0353 on replicon NC_009380
Organism: Salinispora tropica CNB-440



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009380  Strop_0353  two component LuxR family transcriptional regulator  100 
 
 
213 aa  412  1e-114  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_0423  two component LuxR family transcriptional regulator  93.4 
 
 
213 aa  384  1e-106  Salinispora arenicola CNS-205  Bacteria  normal  0.450903  hitchhiker  0.0058743 
 
 
-
 
NC_013595  Sros_6197  response regulator receiver protein  71.03 
 
 
215 aa  290  9e-78  Streptosporangium roseum DSM 43021  Bacteria  normal  0.376562  normal 
 
 
-
 
NC_009921  Franean1_7246  two component LuxR family transcriptional regulator  68.08 
 
 
215 aa  280  9e-75  Frankia sp. EAN1pec  Bacteria  normal  normal  0.172833 
 
 
-
 
NC_013093  Amir_0948  two component transcriptional regulator, LuxR family  67.92 
 
 
214 aa  268  5e-71  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_1653  response regulator receiver protein  66.04 
 
 
220 aa  267  8.999999999999999e-71  Streptosporangium roseum DSM 43021  Bacteria  normal  0.799733  normal 
 
 
-
 
NC_013510  Tcur_3933  two component transcriptional regulator, LuxR family  66.51 
 
 
218 aa  267  8.999999999999999e-71  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_3908  two component transcriptional regulator, LuxR family  64.02 
 
 
214 aa  263  2e-69  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_3717  two component transcriptional regulator, LuxR family  63.68 
 
 
217 aa  260  8.999999999999999e-69  Conexibacter woesei DSM 14684  Bacteria  normal  0.82478  normal 
 
 
-
 
NC_013131  Caci_0198  two component transcriptional regulator, LuxR family  62.74 
 
 
218 aa  257  8e-68  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_0636  two component transcriptional regulator, LuxR family  61.97 
 
 
214 aa  253  1.0000000000000001e-66  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.583432 
 
 
-
 
NC_013947  Snas_2250  two component transcriptional regulator, LuxR family  62.62 
 
 
217 aa  252  3e-66  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137071 
 
 
-
 
NC_013595  Sros_6137  response regulator receiver protein  63.38 
 
 
209 aa  249  3e-65  Streptosporangium roseum DSM 43021  Bacteria  normal  0.633642  normal  0.13111 
 
 
-
 
NC_013172  Bfae_12650  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  62.26 
 
 
217 aa  247  8e-65  Brachybacterium faecium DSM 4810  Bacteria  normal  0.129544  n/a   
 
 
-
 
NC_013131  Caci_1254  two component transcriptional regulator, LuxR family  62.26 
 
 
213 aa  241  5e-63  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_4661  two component transcriptional regulator, LuxR family  64.32 
 
 
220 aa  241  7.999999999999999e-63  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_0610  two component transcriptional regulator, LuxR family  61.32 
 
 
215 aa  240  1e-62  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.440854 
 
 
-
 
NC_013595  Sros_4051  response regulator receiver protein  60.38 
 
 
214 aa  239  2e-62  Streptosporangium roseum DSM 43021  Bacteria  normal  hitchhiker  0.004601 
 
 
-
 
NC_009664  Krad_3915  two component transcriptional regulator, LuxR family  61.68 
 
 
226 aa  239  2e-62  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.161295  normal  0.0598624 
 
 
-
 
NC_013595  Sros_2506  response regulator receiver protein  58.49 
 
 
223 aa  239  2.9999999999999997e-62  Streptosporangium roseum DSM 43021  Bacteria  normal  0.189025  normal  0.663488 
 
 
-
 
NC_013131  Caci_4455  two component transcriptional regulator, LuxR family  64.15 
 
 
213 aa  238  4e-62  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_0203  two component transcriptional regulator, LuxR family  57.55 
 
 
218 aa  236  2e-61  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_2758  response regulator receiver  57.94 
 
 
220 aa  236  2e-61  Salinispora tropica CNB-440  Bacteria  normal  0.21835  normal  0.0217102 
 
 
-
 
NC_014210  Ndas_1960  two component transcriptional regulator, LuxR family  59.53 
 
 
215 aa  235  3e-61  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000329107  hitchhiker  0.00000396613 
 
 
-
 
NC_013739  Cwoe_3762  two component transcriptional regulator, LuxR family  60.93 
 
 
221 aa  235  3e-61  Conexibacter woesei DSM 14684  Bacteria  normal  0.355338  normal  0.813095 
 
 
-
 
NC_013595  Sros_2300  response regulator receiver protein  61.03 
 
 
213 aa  233  1.0000000000000001e-60  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_2757  two component transcriptional regulator, LuxR family  64.79 
 
 
214 aa  233  2.0000000000000002e-60  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0593961  n/a   
 
 
-
 
NC_009338  Mflv_2280  two component LuxR family transcriptional regulator  58.96 
 
 
214 aa  231  4.0000000000000004e-60  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.92337  normal  0.457915 
 
 
-
 
NC_014210  Ndas_2432  two component transcriptional regulator, LuxR family  61.79 
 
 
233 aa  231  7.000000000000001e-60  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.199835  normal  0.129248 
 
 
-
 
NC_013093  Amir_2699  two component transcriptional regulator, LuxR family  56.13 
 
 
226 aa  228  7e-59  Actinosynnema mirum DSM 43827  Bacteria  hitchhiker  0.000000630711  n/a   
 
 
-
 
NC_013595  Sros_4416  response regulator receiver protein  61.68 
 
 
228 aa  227  9e-59  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0335955 
 
 
-
 
NC_012669  Bcav_1359  two component transcriptional regulator, LuxR family  57.92 
 
 
219 aa  226  2e-58  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.323671 
 
 
-
 
NC_008726  Mvan_0263  two component LuxR family transcriptional regulator  60.19 
 
 
214 aa  226  2e-58  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.103764 
 
 
-
 
NC_013510  Tcur_4729  two component transcriptional regulator, LuxR family  58.02 
 
 
212 aa  224  5.0000000000000005e-58  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_0212  two component transcriptional regulator, LuxR family  64.32 
 
 
218 aa  224  5.0000000000000005e-58  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_1992  two component transcriptional regulator, LuxR family  59.15 
 
 
218 aa  224  5.0000000000000005e-58  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_3517  two component transcriptional regulator, LuxR family  56.81 
 
 
214 aa  224  7e-58  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.498529  normal 
 
 
-
 
NC_013947  Snas_2341  two component transcriptional regulator, LuxR family  55.87 
 
 
215 aa  223  1e-57  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_2299  two component LuxR family transcriptional regulator  60.77 
 
 
242 aa  223  1e-57  Frankia sp. EAN1pec  Bacteria  normal  0.0379402  normal 
 
 
-
 
NC_013521  Sked_09230  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  57.14 
 
 
218 aa  223  2e-57  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.310613 
 
 
-
 
NC_008726  Mvan_4386  two component LuxR family transcriptional regulator  57.42 
 
 
209 aa  222  3e-57  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_008705  Mkms_3983  two component LuxR family transcriptional regulator  55.14 
 
 
214 aa  222  4e-57  Mycobacterium sp. KMS  Bacteria  normal  0.714996  normal 
 
 
-
 
NC_009077  Mjls_3924  two component LuxR family transcriptional regulator  55.14 
 
 
214 aa  222  4e-57  Mycobacterium sp. JLS  Bacteria  normal  normal  0.278782 
 
 
-
 
NC_013131  Caci_1917  two component transcriptional regulator, LuxR family  54.25 
 
 
215 aa  220  9.999999999999999e-57  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_3331  two component transcriptional regulator, LuxR family  61.03 
 
 
216 aa  220  9.999999999999999e-57  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0226882  normal  0.21338 
 
 
-
 
NC_013169  Ksed_17580  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  59.15 
 
 
211 aa  219  1.9999999999999999e-56  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.0315732  normal  0.450672 
 
 
-
 
NC_014210  Ndas_2092  two component transcriptional regulator, LuxR family  56.34 
 
 
216 aa  219  1.9999999999999999e-56  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_3545  LuxR family two component transcriptional regulator  58.02 
 
 
213 aa  219  1.9999999999999999e-56  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.701363 
 
 
-
 
NC_013947  Snas_5645  two component transcriptional regulator, LuxR family  55.14 
 
 
215 aa  219  1.9999999999999999e-56  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.117498 
 
 
-
 
NC_009921  Franean1_4332  two component LuxR family transcriptional regulator  58.88 
 
 
225 aa  218  6e-56  Frankia sp. EAN1pec  Bacteria  decreased coverage  0.00650273  normal 
 
 
-
 
NC_013235  Namu_2928  two component transcriptional regulator, LuxR family  53.3 
 
 
243 aa  216  2e-55  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.000012449  hitchhiker  0.0000084288 
 
 
-
 
NC_013739  Cwoe_0320  two component transcriptional regulator, LuxR family  53.99 
 
 
218 aa  216  2e-55  Conexibacter woesei DSM 14684  Bacteria  normal  0.308686  normal  0.0930841 
 
 
-
 
NC_013595  Sros_8722  response regulator receiver protein  56.07 
 
 
210 aa  216  2e-55  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_3862  two component transcriptional regulator, LuxR family  56.13 
 
 
213 aa  216  2.9999999999999998e-55  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00236143  normal 
 
 
-
 
NC_008146  Mmcs_3909  two component LuxR family transcriptional regulator  54.03 
 
 
211 aa  215  4e-55  Mycobacterium sp. MCS  Bacteria  normal  0.755905  n/a   
 
 
-
 
NC_013093  Amir_0530  two component transcriptional regulator, LuxR family  57.48 
 
 
214 aa  215  4e-55  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0201422  n/a   
 
 
-
 
NC_008726  Mvan_2073  two component LuxR family transcriptional regulator  53.55 
 
 
217 aa  215  5e-55  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.776481 
 
 
-
 
NC_013172  Bfae_11890  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  54.25 
 
 
213 aa  213  1.9999999999999998e-54  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_2133  two component transcriptional regulator, LuxR family  61.79 
 
 
214 aa  213  1.9999999999999998e-54  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_0972  two component transcriptional regulator, LuxR family  56.87 
 
 
208 aa  213  1.9999999999999998e-54  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_9330  response regulator receiver protein  56.6 
 
 
221 aa  212  3.9999999999999995e-54  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.603744 
 
 
-
 
NC_013739  Cwoe_4605  two component transcriptional regulator, LuxR family  58.77 
 
 
222 aa  211  5.999999999999999e-54  Conexibacter woesei DSM 14684  Bacteria  normal  0.554224  normal 
 
 
-
 
NC_014151  Cfla_3103  two component transcriptional regulator, LuxR family  60.63 
 
 
223 aa  208  6e-53  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.156187  hitchhiker  0.000316121 
 
 
-
 
NC_013235  Namu_0810  two component transcriptional regulator, LuxR family  52.56 
 
 
219 aa  207  9e-53  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_007333  Tfu_0330  LuxR response regulator receiver  55.61 
 
 
219 aa  205  3e-52  Thermobifida fusca YX  Bacteria  normal  0.673991  n/a   
 
 
-
 
NC_013739  Cwoe_2389  two component transcriptional regulator, LuxR family  55.4 
 
 
215 aa  206  3e-52  Conexibacter woesei DSM 14684  Bacteria  normal  0.205007  decreased coverage  0.00115827 
 
 
-
 
NC_009921  Franean1_0340  two component LuxR family transcriptional regulator  54.25 
 
 
221 aa  206  3e-52  Frankia sp. EAN1pec  Bacteria  normal  normal  0.0115466 
 
 
-
 
NC_013595  Sros_3199  response regulator receiver protein  58.1 
 
 
212 aa  203  1e-51  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_2524  two component transcriptional regulator, LuxR family  58.26 
 
 
228 aa  202  3e-51  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.0516799  n/a   
 
 
-
 
NC_013947  Snas_4725  two component transcriptional regulator, LuxR family  56.6 
 
 
218 aa  202  3e-51  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.37253  normal 
 
 
-
 
NC_014210  Ndas_0307  two component transcriptional regulator, LuxR family  61.32 
 
 
214 aa  202  4e-51  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.115356  normal  0.300779 
 
 
-
 
NC_013521  Sked_35890  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  58.14 
 
 
239 aa  198  3.9999999999999996e-50  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.479689 
 
 
-
 
NC_013530  Xcel_0244  two component transcriptional regulator, LuxR family  53.05 
 
 
216 aa  198  5e-50  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_0968  two component LuxR family transcriptional regulator  51.39 
 
 
220 aa  197  1.0000000000000001e-49  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_2541  two component transcriptional regulator, LuxR family  50.23 
 
 
215 aa  194  8.000000000000001e-49  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.92112  n/a   
 
 
-
 
NC_008726  Mvan_5906  two component LuxR family transcriptional regulator  52.31 
 
 
228 aa  192  4e-48  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.363446  normal 
 
 
-
 
NC_013093  Amir_4689  two component transcriptional regulator, LuxR family  58.49 
 
 
216 aa  190  1e-47  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_2641  two component transcriptional regulator, LuxR family  53.27 
 
 
220 aa  188  5e-47  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.53526  normal 
 
 
-
 
NC_013739  Cwoe_3050  two component transcriptional regulator, LuxR family  48.11 
 
 
214 aa  188  5e-47  Conexibacter woesei DSM 14684  Bacteria  normal  0.127757  normal 
 
 
-
 
NC_013530  Xcel_1460  two component transcriptional regulator, LuxR family  51.64 
 
 
224 aa  187  1e-46  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.659068  n/a   
 
 
-
 
NC_008541  Arth_3490  two component LuxR family transcriptional regulator  50.69 
 
 
218 aa  186  2e-46  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_4020  two component transcriptional regulator, LuxR family  60 
 
 
215 aa  186  2e-46  Kineococcus radiotolerans SRS30216  Bacteria  hitchhiker  0.000894251  normal  0.0789775 
 
 
-
 
NC_009921  Franean1_6700  two component LuxR family transcriptional regulator  52.58 
 
 
257 aa  185  5e-46  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_3029  two component transcriptional regulator, LuxR family  49.53 
 
 
815 aa  184  6e-46  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00871852  hitchhiker  0.00628617 
 
 
-
 
NC_013739  Cwoe_5165  two component transcriptional regulator, LuxR family  48.58 
 
 
214 aa  177  7e-44  Conexibacter woesei DSM 14684  Bacteria  normal  0.852017  normal 
 
 
-
 
NC_013739  Cwoe_0318  two component transcriptional regulator, LuxR family  51.4 
 
 
221 aa  175  5e-43  Conexibacter woesei DSM 14684  Bacteria  normal  0.29485  normal  0.172489 
 
 
-
 
NC_009921  Franean1_6494  two component LuxR family transcriptional regulator  50 
 
 
235 aa  174  7e-43  Frankia sp. EAN1pec  Bacteria  normal  0.0149487  normal  0.504125 
 
 
-
 
NC_013169  Ksed_07220  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  47 
 
 
226 aa  165  5e-40  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal  0.740026 
 
 
-
 
NC_009921  Franean1_7225  two component LuxR family transcriptional regulator  45.54 
 
 
229 aa  164  6.9999999999999995e-40  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_1746  two component transcriptional regulator, LuxR family  46.26 
 
 
222 aa  162  3e-39  Nakamurella multipartita DSM 44233  Bacteria  normal  0.139209  normal  0.0305301 
 
 
-
 
NC_007777  Francci3_0084  two component LuxR family transcriptional regulator  50.23 
 
 
239 aa  162  4.0000000000000004e-39  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_1501  two component transcriptional regulator, LuxR family  43.72 
 
 
228 aa  156  2e-37  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.138703 
 
 
-
 
NC_013595  Sros_0503  response regulator receiver protein  46.36 
 
 
226 aa  151  5.9999999999999996e-36  Streptosporangium roseum DSM 43021  Bacteria  normal  0.544154  normal 
 
 
-
 
NC_009921  Franean1_2504  two component LuxR family transcriptional regulator  39.81 
 
 
218 aa  140  1.9999999999999998e-32  Frankia sp. EAN1pec  Bacteria  decreased coverage  0.00866313  normal 
 
 
-
 
NC_002976  SERP1981  transcriptional regulatory protein DegU, putative  33.18 
 
 
218 aa  108  7.000000000000001e-23  Staphylococcus epidermidis RP62A  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_1910  response regulator receiver protein  38.42 
 
 
226 aa  108  8.000000000000001e-23  Streptosporangium roseum DSM 43021  Bacteria  normal  0.238062  normal  0.36963 
 
 
-
 
NC_013131  Caci_7812  two component transcriptional regulator, LuxR family  38.46 
 
 
227 aa  107  1e-22  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_5808  two component LuxR family transcriptional regulator  55.36 
 
 
146 aa  107  1e-22  Frankia sp. EAN1pec  Bacteria  normal  0.812897  normal 
 
 
-
 
NC_013411  GYMC61_3240  two component transcriptional regulator, LuxR family  37.5 
 
 
224 aa  107  2e-22  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_007404  Tbd_2464  two component LuxR family transcriptional regulator  38.16 
 
 
221 aa  105  5e-22  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal 
 
 
-
 
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