Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cfla_3103 |
Symbol | |
ID | 9147016 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Cellulomonas flavigena DSM 20109 |
Kingdom | Bacteria |
Replicon accession | NC_014151 |
Strand | - |
Start bp | 3447579 |
End bp | 3448250 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | |
Product | two component transcriptional regulator, LuxR family |
Protein accession | YP_003638184 |
Protein GI | 296130934 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.156187 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.000316121 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | GTGCGCATCG TGATCGCCGA GGACTCGGTC CTCCTGCTGG ACGGCCTGTC CCGGCTGCTC ACCGCCGAGG GGCACACCGT CACCGGCTAC CCGACAGCCG ACGCGCTCGT CGCCGCCCTG GGCGACCCCG ACGCCGACCT GCCGGACGTG CTCGTCACCG ACGTCCGCAT GCCGCCCACG CACACCGACG AGGGCCTGCG TGCCGCCGTC CACCTGCGCG GGCTGCACCC GGGGCTTCCG GTGCTGGTGC TCTCGCAGTA CGTCGAGCAG CGCTACGCCC GCGAGCTGCT CGTGGGTGAC GCGGGCGGTC TGGGCTACGT CCTCAAGGAC CGCGTGGCCG ACGTCGACGA CTTCCTCGCC GCGCTGGCAC GGGTCGCCGC CGGCGGCACC GTCGTCGACC CCGAGGTCGT CGCGCAGGTG CTCGCCCGGT CCCGGCGCAG CCTGTCCGAC CTGCTGACGC CCCGCGAGCG CGAGGTCATC GCGCTCATGG CGGAAGGTCG CTCGAACGCG GCGATCGCCG ACCGGCTCGT CGTCGGGCTG CCGGCCGTCG AGAAGCACGT CACCTCGATC CTCACCAAGC TCGACCTGCC GCCCGACTCC GACGACCACC GCCGCGTCCT CGCGGTCCTG CGGTGGCTGG AGGACGGCCC GACGAACGGA GCGCGACCGT GA
|
Protein sequence | MRIVIAEDSV LLLDGLSRLL TAEGHTVTGY PTADALVAAL GDPDADLPDV LVTDVRMPPT HTDEGLRAAV HLRGLHPGLP VLVLSQYVEQ RYARELLVGD AGGLGYVLKD RVADVDDFLA ALARVAAGGT VVDPEVVAQV LARSRRSLSD LLTPREREVI ALMAEGRSNA AIADRLVVGL PAVEKHVTSI LTKLDLPPDS DDHRRVLAVL RWLEDGPTNG ARP
|
| |