Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_2641 |
Symbol | |
ID | 8883836 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 2776748 |
End bp | 2777410 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | two component transcriptional regulator, LuxR family |
Protein accession | YP_003511411 |
Protein GI | 291300133 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.53526 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGAGTGG TGATCGTCGA GGACGACGCG CTGCTGCGCC GGGGTCTGAC GCTGCTGTTG GAGTCGGAGG GTTTCGAGGT CGCGGCGAGC ACGACCACCG CCGAGGAGTT CCTCGAAGCG GTCGACCGGG AGCGTCCCGA CATCGCCGTG GTGGACGTGC GGCTGCCGCC CACGTTCCGC GACGAGGGAC TGCGCGCCGC GGTCGAGGCG CGGCGGCGCC ACAGGGGACT GCCGGTGCTG GTCCTGTCGG CGCATGTGGA ACACGACTAC GCCACCCAGC TGCTGTCCGA CGGCGACGGC AGGGTCGGGT ATCTGTTGAA GGAGCGGGTC GGGAAGGTCG AGGAGTTCCT CGACGCGATC CGCCGCGTCG TGGACGGCGG TGCCGCGATC GACCCGGAGG TGATCTCGCA GCTGCTGGCG GGCCAGAAGT CGTCCGGACG GGTGCTGGGC AAACTCAGCG CGCGCGAGCA CGAGGTGCTG GGGTTGATGG CCGAGGGCTA CGGCAACGGC AGTATCGCCG CGACGTTGGT CATCACCGAA ACCGCGGTGA GCAAACACAT CCGCAACATC TTCGCGAAGC TCGACCTGCC GCAGAGCGAG ACCGGGCACC GGCGGGTGTT GGCGGTGCTG GCGTACCTTC AGGCGTCGAA TCGGTTCGGG TGA
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Protein sequence | MRVVIVEDDA LLRRGLTLLL ESEGFEVAAS TTTAEEFLEA VDRERPDIAV VDVRLPPTFR DEGLRAAVEA RRRHRGLPVL VLSAHVEHDY ATQLLSDGDG RVGYLLKERV GKVEEFLDAI RRVVDGGAAI DPEVISQLLA GQKSSGRVLG KLSAREHEVL GLMAEGYGNG SIAATLVITE TAVSKHIRNI FAKLDLPQSE TGHRRVLAVL AYLQASNRFG
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