Gene Snas_2641 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_2641 
Symbol 
ID8883836 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp2776748 
End bp2777410 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content69% 
IMG OID 
Producttwo component transcriptional regulator, LuxR family 
Protein accessionYP_003511411 
Protein GI291300133 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.53526 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGAGTGG TGATCGTCGA GGACGACGCG CTGCTGCGCC GGGGTCTGAC GCTGCTGTTG 
GAGTCGGAGG GTTTCGAGGT CGCGGCGAGC ACGACCACCG CCGAGGAGTT CCTCGAAGCG
GTCGACCGGG AGCGTCCCGA CATCGCCGTG GTGGACGTGC GGCTGCCGCC CACGTTCCGC
GACGAGGGAC TGCGCGCCGC GGTCGAGGCG CGGCGGCGCC ACAGGGGACT GCCGGTGCTG
GTCCTGTCGG CGCATGTGGA ACACGACTAC GCCACCCAGC TGCTGTCCGA CGGCGACGGC
AGGGTCGGGT ATCTGTTGAA GGAGCGGGTC GGGAAGGTCG AGGAGTTCCT CGACGCGATC
CGCCGCGTCG TGGACGGCGG TGCCGCGATC GACCCGGAGG TGATCTCGCA GCTGCTGGCG
GGCCAGAAGT CGTCCGGACG GGTGCTGGGC AAACTCAGCG CGCGCGAGCA CGAGGTGCTG
GGGTTGATGG CCGAGGGCTA CGGCAACGGC AGTATCGCCG CGACGTTGGT CATCACCGAA
ACCGCGGTGA GCAAACACAT CCGCAACATC TTCGCGAAGC TCGACCTGCC GCAGAGCGAG
ACCGGGCACC GGCGGGTGTT GGCGGTGCTG GCGTACCTTC AGGCGTCGAA TCGGTTCGGG
TGA
 
Protein sequence
MRVVIVEDDA LLRRGLTLLL ESEGFEVAAS TTTAEEFLEA VDRERPDIAV VDVRLPPTFR 
DEGLRAAVEA RRRHRGLPVL VLSAHVEHDY ATQLLSDGDG RVGYLLKERV GKVEEFLDAI
RRVVDGGAAI DPEVISQLLA GQKSSGRVLG KLSAREHEVL GLMAEGYGNG SIAATLVITE
TAVSKHIRNI FAKLDLPQSE TGHRRVLAVL AYLQASNRFG