More than 300 homologs were found in PanDaTox collection
for query gene Krad_3331 on replicon NC_009664
Organism: Kineococcus radiotolerans SRS30216



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009664  Krad_3331  two component transcriptional regulator, LuxR family  100 
 
 
216 aa  414  9.999999999999999e-116  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0226882  normal  0.21338 
 
 
-
 
NC_013131  Caci_0610  two component transcriptional regulator, LuxR family  61.79 
 
 
215 aa  253  2.0000000000000002e-66  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.440854 
 
 
-
 
NC_013510  Tcur_4729  two component transcriptional regulator, LuxR family  62.26 
 
 
212 aa  252  3e-66  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_3908  two component transcriptional regulator, LuxR family  63.85 
 
 
214 aa  246  2e-64  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_0423  two component LuxR family transcriptional regulator  63.38 
 
 
213 aa  239  2.9999999999999997e-62  Salinispora arenicola CNS-205  Bacteria  normal  0.450903  hitchhiker  0.0058743 
 
 
-
 
NC_013595  Sros_2300  response regulator receiver protein  62.74 
 
 
213 aa  238  5e-62  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_3933  two component transcriptional regulator, LuxR family  60 
 
 
218 aa  238  5.999999999999999e-62  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_6137  response regulator receiver protein  61.14 
 
 
209 aa  237  1e-61  Streptosporangium roseum DSM 43021  Bacteria  normal  0.633642  normal  0.13111 
 
 
-
 
NC_013131  Caci_0203  two component transcriptional regulator, LuxR family  55.66 
 
 
218 aa  236  2e-61  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_0198  two component transcriptional regulator, LuxR family  58.96 
 
 
218 aa  236  2e-61  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_1653  response regulator receiver protein  59.35 
 
 
220 aa  236  2e-61  Streptosporangium roseum DSM 43021  Bacteria  normal  0.799733  normal 
 
 
-
 
NC_009921  Franean1_7246  two component LuxR family transcriptional regulator  61.5 
 
 
215 aa  236  2e-61  Frankia sp. EAN1pec  Bacteria  normal  normal  0.172833 
 
 
-
 
NC_013739  Cwoe_3717  two component transcriptional regulator, LuxR family  60.85 
 
 
217 aa  236  3e-61  Conexibacter woesei DSM 14684  Bacteria  normal  0.82478  normal 
 
 
-
 
NC_013131  Caci_0636  two component transcriptional regulator, LuxR family  60.09 
 
 
214 aa  235  3e-61  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.583432 
 
 
-
 
NC_008726  Mvan_0263  two component LuxR family transcriptional regulator  60.48 
 
 
214 aa  235  4e-61  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.103764 
 
 
-
 
NC_009380  Strop_0353  two component LuxR family transcriptional regulator  61.03 
 
 
213 aa  232  3e-60  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_2506  response regulator receiver protein  58.14 
 
 
223 aa  232  3e-60  Streptosporangium roseum DSM 43021  Bacteria  normal  0.189025  normal  0.663488 
 
 
-
 
NC_013595  Sros_4051  response regulator receiver protein  59.43 
 
 
214 aa  230  1e-59  Streptosporangium roseum DSM 43021  Bacteria  normal  hitchhiker  0.004601 
 
 
-
 
NC_014210  Ndas_1960  two component transcriptional regulator, LuxR family  55.87 
 
 
215 aa  228  4e-59  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000329107  hitchhiker  0.00000396613 
 
 
-
 
NC_014165  Tbis_3545  LuxR family two component transcriptional regulator  58.02 
 
 
213 aa  228  4e-59  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.701363 
 
 
-
 
NC_009380  Strop_2758  response regulator receiver  57.55 
 
 
220 aa  228  4e-59  Salinispora tropica CNB-440  Bacteria  normal  0.21835  normal  0.0217102 
 
 
-
 
NC_013093  Amir_0948  two component transcriptional regulator, LuxR family  60.56 
 
 
214 aa  227  9e-59  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_0212  two component transcriptional regulator, LuxR family  59.35 
 
 
218 aa  226  3e-58  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_3517  two component transcriptional regulator, LuxR family  57.28 
 
 
214 aa  224  6e-58  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.498529  normal 
 
 
-
 
NC_013235  Namu_3862  two component transcriptional regulator, LuxR family  58.22 
 
 
213 aa  224  8e-58  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00236143  normal 
 
 
-
 
NC_012669  Bcav_1359  two component transcriptional regulator, LuxR family  59.09 
 
 
219 aa  224  1e-57  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.323671 
 
 
-
 
NC_013521  Sked_09230  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  57.14 
 
 
218 aa  223  2e-57  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.310613 
 
 
-
 
NC_013131  Caci_1917  two component transcriptional regulator, LuxR family  59.43 
 
 
215 aa  222  4e-57  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_1254  two component transcriptional regulator, LuxR family  58.77 
 
 
213 aa  222  4e-57  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_4332  two component LuxR family transcriptional regulator  61.79 
 
 
225 aa  221  4.9999999999999996e-57  Frankia sp. EAN1pec  Bacteria  decreased coverage  0.00650273  normal 
 
 
-
 
NC_013235  Namu_2928  two component transcriptional regulator, LuxR family  56.6 
 
 
243 aa  221  8e-57  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.000012449  hitchhiker  0.0000084288 
 
 
-
 
NC_013947  Snas_2250  two component transcriptional regulator, LuxR family  56.13 
 
 
217 aa  220  9.999999999999999e-57  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137071 
 
 
-
 
NC_013093  Amir_2699  two component transcriptional regulator, LuxR family  57.01 
 
 
226 aa  220  9.999999999999999e-57  Actinosynnema mirum DSM 43827  Bacteria  hitchhiker  0.000000630711  n/a   
 
 
-
 
NC_009664  Krad_3915  two component transcriptional regulator, LuxR family  58.02 
 
 
226 aa  220  9.999999999999999e-57  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.161295  normal  0.0598624 
 
 
-
 
NC_014151  Cfla_3103  two component transcriptional regulator, LuxR family  60.75 
 
 
223 aa  220  9.999999999999999e-57  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.156187  hitchhiker  0.000316121 
 
 
-
 
NC_013235  Namu_0810  two component transcriptional regulator, LuxR family  54.13 
 
 
219 aa  218  7e-56  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_2341  two component transcriptional regulator, LuxR family  56.81 
 
 
215 aa  216  2.9999999999999998e-55  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_2280  two component LuxR family transcriptional regulator  56.13 
 
 
214 aa  216  2.9999999999999998e-55  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.92337  normal  0.457915 
 
 
-
 
NC_013510  Tcur_4661  two component transcriptional regulator, LuxR family  58.33 
 
 
220 aa  216  2.9999999999999998e-55  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_12650  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  54.72 
 
 
217 aa  215  4e-55  Brachybacterium faecium DSM 4810  Bacteria  normal  0.129544  n/a   
 
 
-
 
NC_007333  Tfu_0330  LuxR response regulator receiver  57.48 
 
 
219 aa  214  9.999999999999999e-55  Thermobifida fusca YX  Bacteria  normal  0.673991  n/a   
 
 
-
 
NC_013595  Sros_6197  response regulator receiver protein  57.48 
 
 
215 aa  214  9.999999999999999e-55  Streptosporangium roseum DSM 43021  Bacteria  normal  0.376562  normal 
 
 
-
 
NC_009921  Franean1_2299  two component LuxR family transcriptional regulator  59.33 
 
 
242 aa  214  9.999999999999999e-55  Frankia sp. EAN1pec  Bacteria  normal  0.0379402  normal 
 
 
-
 
NC_008726  Mvan_4386  two component LuxR family transcriptional regulator  56.46 
 
 
209 aa  213  1.9999999999999998e-54  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_1992  two component transcriptional regulator, LuxR family  55.4 
 
 
218 aa  213  1.9999999999999998e-54  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_2524  two component transcriptional regulator, LuxR family  62.39 
 
 
228 aa  212  2.9999999999999995e-54  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.0516799  n/a   
 
 
-
 
NC_013131  Caci_4455  two component transcriptional regulator, LuxR family  57.62 
 
 
213 aa  211  5.999999999999999e-54  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008705  Mkms_3983  two component LuxR family transcriptional regulator  53.77 
 
 
214 aa  211  5.999999999999999e-54  Mycobacterium sp. KMS  Bacteria  normal  0.714996  normal 
 
 
-
 
NC_009077  Mjls_3924  two component LuxR family transcriptional regulator  53.77 
 
 
214 aa  211  5.999999999999999e-54  Mycobacterium sp. JLS  Bacteria  normal  normal  0.278782 
 
 
-
 
NC_014210  Ndas_2092  two component transcriptional regulator, LuxR family  55.19 
 
 
216 aa  211  1e-53  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_2541  two component transcriptional regulator, LuxR family  51.17 
 
 
215 aa  210  1e-53  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.92112  n/a   
 
 
-
 
NC_013739  Cwoe_3762  two component transcriptional regulator, LuxR family  55.35 
 
 
221 aa  209  3e-53  Conexibacter woesei DSM 14684  Bacteria  normal  0.355338  normal  0.813095 
 
 
-
 
NC_014210  Ndas_2432  two component transcriptional regulator, LuxR family  59.05 
 
 
233 aa  209  3e-53  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.199835  normal  0.129248 
 
 
-
 
NC_013595  Sros_8722  response regulator receiver protein  54.29 
 
 
210 aa  207  7e-53  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_3909  two component LuxR family transcriptional regulator  53.59 
 
 
211 aa  206  2e-52  Mycobacterium sp. MCS  Bacteria  normal  0.755905  n/a   
 
 
-
 
NC_013739  Cwoe_0320  two component transcriptional regulator, LuxR family  55.09 
 
 
218 aa  206  2e-52  Conexibacter woesei DSM 14684  Bacteria  normal  0.308686  normal  0.0930841 
 
 
-
 
NC_013947  Snas_5645  two component transcriptional regulator, LuxR family  52.38 
 
 
215 aa  206  3e-52  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.117498 
 
 
-
 
NC_013595  Sros_9330  response regulator receiver protein  57.08 
 
 
221 aa  206  3e-52  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.603744 
 
 
-
 
NC_009338  Mflv_0968  two component LuxR family transcriptional regulator  55.71 
 
 
220 aa  205  3e-52  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_4605  two component transcriptional regulator, LuxR family  57.89 
 
 
222 aa  205  4e-52  Conexibacter woesei DSM 14684  Bacteria  normal  0.554224  normal 
 
 
-
 
NC_014210  Ndas_2133  two component transcriptional regulator, LuxR family  58.96 
 
 
214 aa  203  1e-51  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_4725  two component transcriptional regulator, LuxR family  54.03 
 
 
218 aa  202  3e-51  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.37253  normal 
 
 
-
 
NC_013093  Amir_0530  two component transcriptional regulator, LuxR family  56.13 
 
 
214 aa  201  6e-51  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0201422  n/a   
 
 
-
 
NC_008726  Mvan_5906  two component LuxR family transcriptional regulator  56.48 
 
 
228 aa  201  8e-51  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.363446  normal 
 
 
-
 
NC_013521  Sked_35890  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  56.28 
 
 
239 aa  200  1.9999999999999998e-50  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.479689 
 
 
-
 
NC_013739  Cwoe_2389  two component transcriptional regulator, LuxR family  52.58 
 
 
215 aa  196  2.0000000000000003e-49  Conexibacter woesei DSM 14684  Bacteria  normal  0.205007  decreased coverage  0.00115827 
 
 
-
 
NC_013595  Sros_4416  response regulator receiver protein  51.66 
 
 
228 aa  192  4e-48  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0335955 
 
 
-
 
NC_013947  Snas_2641  two component transcriptional regulator, LuxR family  50.47 
 
 
220 aa  188  7e-47  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.53526  normal 
 
 
-
 
NC_013093  Amir_4689  two component transcriptional regulator, LuxR family  56.6 
 
 
216 aa  187  1e-46  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_2757  two component transcriptional regulator, LuxR family  56.81 
 
 
214 aa  186  2e-46  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0593961  n/a   
 
 
-
 
NC_008541  Arth_3490  two component LuxR family transcriptional regulator  50.23 
 
 
218 aa  185  5e-46  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_0972  two component transcriptional regulator, LuxR family  53.33 
 
 
208 aa  185  5e-46  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_0244  two component transcriptional regulator, LuxR family  50.23 
 
 
216 aa  184  1.0000000000000001e-45  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_4020  two component transcriptional regulator, LuxR family  59.47 
 
 
215 aa  183  1.0000000000000001e-45  Kineococcus radiotolerans SRS30216  Bacteria  hitchhiker  0.000894251  normal  0.0789775 
 
 
-
 
NC_009921  Franean1_6700  two component LuxR family transcriptional regulator  52.58 
 
 
257 aa  184  1.0000000000000001e-45  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_11890  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  47.89 
 
 
213 aa  183  2.0000000000000003e-45  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_3050  two component transcriptional regulator, LuxR family  47.66 
 
 
214 aa  182  4.0000000000000006e-45  Conexibacter woesei DSM 14684  Bacteria  normal  0.127757  normal 
 
 
-
 
NC_013235  Namu_3029  two component transcriptional regulator, LuxR family  47.66 
 
 
815 aa  181  7e-45  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00871852  hitchhiker  0.00628617 
 
 
-
 
NC_009921  Franean1_0340  two component LuxR family transcriptional regulator  50 
 
 
221 aa  181  9.000000000000001e-45  Frankia sp. EAN1pec  Bacteria  normal  normal  0.0115466 
 
 
-
 
NC_013169  Ksed_17580  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  49.06 
 
 
211 aa  180  2e-44  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.0315732  normal  0.450672 
 
 
-
 
NC_013595  Sros_3199  response regulator receiver protein  52.38 
 
 
212 aa  179  2.9999999999999997e-44  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_0307  two component transcriptional regulator, LuxR family  53.55 
 
 
214 aa  178  5.999999999999999e-44  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.115356  normal  0.300779 
 
 
-
 
NC_008726  Mvan_2073  two component LuxR family transcriptional regulator  48.84 
 
 
217 aa  177  1e-43  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.776481 
 
 
-
 
NC_013739  Cwoe_5165  two component transcriptional regulator, LuxR family  48.6 
 
 
214 aa  176  4e-43  Conexibacter woesei DSM 14684  Bacteria  normal  0.852017  normal 
 
 
-
 
NC_009921  Franean1_6494  two component LuxR family transcriptional regulator  51.63 
 
 
235 aa  175  4e-43  Frankia sp. EAN1pec  Bacteria  normal  0.0149487  normal  0.504125 
 
 
-
 
NC_013739  Cwoe_0318  two component transcriptional regulator, LuxR family  51.4 
 
 
221 aa  172  2.9999999999999996e-42  Conexibacter woesei DSM 14684  Bacteria  normal  0.29485  normal  0.172489 
 
 
-
 
NC_013169  Ksed_07220  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  48.37 
 
 
226 aa  172  5e-42  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal  0.740026 
 
 
-
 
NC_009921  Franean1_7225  two component LuxR family transcriptional regulator  46.01 
 
 
229 aa  171  7.999999999999999e-42  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_1460  two component transcriptional regulator, LuxR family  46.95 
 
 
224 aa  164  6.9999999999999995e-40  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.659068  n/a   
 
 
-
 
NC_013739  Cwoe_1501  two component transcriptional regulator, LuxR family  45.95 
 
 
228 aa  164  1.0000000000000001e-39  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.138703 
 
 
-
 
NC_013595  Sros_0503  response regulator receiver protein  49.33 
 
 
226 aa  159  3e-38  Streptosporangium roseum DSM 43021  Bacteria  normal  0.544154  normal 
 
 
-
 
NC_013235  Namu_1746  two component transcriptional regulator, LuxR family  46.26 
 
 
222 aa  159  4e-38  Nakamurella multipartita DSM 44233  Bacteria  normal  0.139209  normal  0.0305301 
 
 
-
 
NC_009921  Franean1_2504  two component LuxR family transcriptional regulator  41.71 
 
 
218 aa  157  1e-37  Frankia sp. EAN1pec  Bacteria  decreased coverage  0.00866313  normal 
 
 
-
 
NC_007777  Francci3_0084  two component LuxR family transcriptional regulator  46.01 
 
 
239 aa  148  5e-35  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_013525  Tter_0300  two component transcriptional regulator, LuxR family  36.18 
 
 
224 aa  107  1e-22  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_010001  Cphy_3936  two component LuxR family transcriptional regulator  33.98 
 
 
213 aa  107  2e-22  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00507176  n/a   
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  32.7 
 
 
216 aa  106  3e-22  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_0681  two component transcriptional regulator, LuxR family  36.49 
 
 
223 aa  104  8e-22  Cellulomonas flavigena DSM 20109  Bacteria  normal  hitchhiker  0.000015615 
 
 
-
 
NC_013739  Cwoe_4937  two component transcriptional regulator, LuxR family  39.09 
 
 
224 aa  103  1e-21  Conexibacter woesei DSM 14684  Bacteria  normal  0.570807  normal  0.210467 
 
 
-
 
NC_009767  Rcas_1142  two component LuxR family transcriptional regulator  37.8 
 
 
222 aa  104  1e-21  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.661777  normal 
 
 
-
 
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