More than 300 homologs were found in PanDaTox collection
for query gene Bcav_1359 on replicon NC_012669
Organism: Beutenbergia cavernae DSM 12333



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012669  Bcav_1359  two component transcriptional regulator, LuxR family  100 
 
 
219 aa  427  1e-119  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.323671 
 
 
-
 
NC_013521  Sked_09230  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  73.97 
 
 
218 aa  298  4e-80  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.310613 
 
 
-
 
NC_013530  Xcel_2524  two component transcriptional regulator, LuxR family  77.17 
 
 
228 aa  287  7e-77  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.0516799  n/a   
 
 
-
 
NC_008726  Mvan_0263  two component LuxR family transcriptional regulator  65.44 
 
 
214 aa  265  4e-70  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.103764 
 
 
-
 
NC_013131  Caci_0203  two component transcriptional regulator, LuxR family  63.3 
 
 
218 aa  257  1e-67  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_0610  two component transcriptional regulator, LuxR family  63.01 
 
 
215 aa  254  9e-67  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.440854 
 
 
-
 
NC_013739  Cwoe_3717  two component transcriptional regulator, LuxR family  62.1 
 
 
217 aa  251  6e-66  Conexibacter woesei DSM 14684  Bacteria  normal  0.82478  normal 
 
 
-
 
NC_013131  Caci_0198  two component transcriptional regulator, LuxR family  61.19 
 
 
218 aa  250  1e-65  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_35890  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  64.06 
 
 
239 aa  243  9.999999999999999e-64  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.479689 
 
 
-
 
NC_013739  Cwoe_3908  two component transcriptional regulator, LuxR family  59.73 
 
 
214 aa  240  1e-62  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_3933  two component transcriptional regulator, LuxR family  61.64 
 
 
218 aa  239  2e-62  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_0212  two component transcriptional regulator, LuxR family  62.21 
 
 
218 aa  240  2e-62  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_3915  two component transcriptional regulator, LuxR family  59.73 
 
 
226 aa  238  5e-62  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.161295  normal  0.0598624 
 
 
-
 
NC_014210  Ndas_3517  two component transcriptional regulator, LuxR family  60.45 
 
 
214 aa  236  2e-61  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.498529  normal 
 
 
-
 
NC_013131  Caci_1254  two component transcriptional regulator, LuxR family  59.17 
 
 
213 aa  235  4e-61  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_12650  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  56.62 
 
 
217 aa  235  4e-61  Brachybacterium faecium DSM 4810  Bacteria  normal  0.129544  n/a   
 
 
-
 
NC_009921  Franean1_2299  two component LuxR family transcriptional regulator  62.5 
 
 
242 aa  233  2.0000000000000002e-60  Frankia sp. EAN1pec  Bacteria  normal  0.0379402  normal 
 
 
-
 
NC_013595  Sros_1653  response regulator receiver protein  58.9 
 
 
220 aa  231  4.0000000000000004e-60  Streptosporangium roseum DSM 43021  Bacteria  normal  0.799733  normal 
 
 
-
 
NC_013235  Namu_3862  two component transcriptional regulator, LuxR family  58.53 
 
 
213 aa  229  3e-59  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00236143  normal 
 
 
-
 
NC_013595  Sros_2300  response regulator receiver protein  57.8 
 
 
213 aa  228  7e-59  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_7246  two component LuxR family transcriptional regulator  57.73 
 
 
215 aa  227  9e-59  Frankia sp. EAN1pec  Bacteria  normal  normal  0.172833 
 
 
-
 
NC_009953  Sare_0423  two component LuxR family transcriptional regulator  59.55 
 
 
213 aa  227  1e-58  Salinispora arenicola CNS-205  Bacteria  normal  0.450903  hitchhiker  0.0058743 
 
 
-
 
NC_013947  Snas_2341  two component transcriptional regulator, LuxR family  56.82 
 
 
215 aa  226  2e-58  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_0353  two component LuxR family transcriptional regulator  57.92 
 
 
213 aa  226  2e-58  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_008705  Mkms_3983  two component LuxR family transcriptional regulator  56.42 
 
 
214 aa  225  3e-58  Mycobacterium sp. KMS  Bacteria  normal  0.714996  normal 
 
 
-
 
NC_009077  Mjls_3924  two component LuxR family transcriptional regulator  56.42 
 
 
214 aa  225  3e-58  Mycobacterium sp. JLS  Bacteria  normal  normal  0.278782 
 
 
-
 
NC_013595  Sros_6137  response regulator receiver protein  58.18 
 
 
209 aa  224  5.0000000000000005e-58  Streptosporangium roseum DSM 43021  Bacteria  normal  0.633642  normal  0.13111 
 
 
-
 
NC_013595  Sros_4051  response regulator receiver protein  57.53 
 
 
214 aa  224  6e-58  Streptosporangium roseum DSM 43021  Bacteria  normal  hitchhiker  0.004601 
 
 
-
 
NC_014151  Cfla_3103  two component transcriptional regulator, LuxR family  60.37 
 
 
223 aa  222  4e-57  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.156187  hitchhiker  0.000316121 
 
 
-
 
NC_009338  Mflv_2280  two component LuxR family transcriptional regulator  56.42 
 
 
214 aa  221  6e-57  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.92337  normal  0.457915 
 
 
-
 
NC_014210  Ndas_1960  two component transcriptional regulator, LuxR family  55 
 
 
215 aa  220  9.999999999999999e-57  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000329107  hitchhiker  0.00000396613 
 
 
-
 
NC_013093  Amir_0948  two component transcriptional regulator, LuxR family  57.34 
 
 
214 aa  220  9.999999999999999e-57  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_2432  two component transcriptional regulator, LuxR family  59.17 
 
 
233 aa  220  1.9999999999999999e-56  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.199835  normal  0.129248 
 
 
-
 
NC_008146  Mmcs_3909  two component LuxR family transcriptional regulator  55.3 
 
 
211 aa  219  3e-56  Mycobacterium sp. MCS  Bacteria  normal  0.755905  n/a   
 
 
-
 
NC_013739  Cwoe_3762  two component transcriptional regulator, LuxR family  56.76 
 
 
221 aa  219  3.9999999999999997e-56  Conexibacter woesei DSM 14684  Bacteria  normal  0.355338  normal  0.813095 
 
 
-
 
NC_008726  Mvan_4386  two component LuxR family transcriptional regulator  55.81 
 
 
209 aa  218  7.999999999999999e-56  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_6197  response regulator receiver protein  58.56 
 
 
215 aa  214  9e-55  Streptosporangium roseum DSM 43021  Bacteria  normal  0.376562  normal 
 
 
-
 
NC_013530  Xcel_0244  two component transcriptional regulator, LuxR family  54.71 
 
 
216 aa  213  1.9999999999999998e-54  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_2092  two component transcriptional regulator, LuxR family  52.73 
 
 
216 aa  213  1.9999999999999998e-54  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_5645  two component transcriptional regulator, LuxR family  54.34 
 
 
215 aa  212  2.9999999999999995e-54  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.117498 
 
 
-
 
NC_007333  Tfu_0330  LuxR response regulator receiver  54.55 
 
 
219 aa  212  3.9999999999999995e-54  Thermobifida fusca YX  Bacteria  normal  0.673991  n/a   
 
 
-
 
NC_013131  Caci_0636  two component transcriptional regulator, LuxR family  56.11 
 
 
214 aa  211  4.9999999999999996e-54  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.583432 
 
 
-
 
NC_013947  Snas_2250  two component transcriptional regulator, LuxR family  52.94 
 
 
217 aa  211  7.999999999999999e-54  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137071 
 
 
-
 
NC_009664  Krad_3331  two component transcriptional regulator, LuxR family  59.09 
 
 
216 aa  211  9e-54  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0226882  normal  0.21338 
 
 
-
 
NC_013595  Sros_8722  response regulator receiver protein  54.09 
 
 
210 aa  210  1e-53  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_3545  LuxR family two component transcriptional regulator  54.38 
 
 
213 aa  208  5e-53  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.701363 
 
 
-
 
NC_009380  Strop_2758  response regulator receiver  53.85 
 
 
220 aa  207  8e-53  Salinispora tropica CNB-440  Bacteria  normal  0.21835  normal  0.0217102 
 
 
-
 
NC_009664  Krad_1992  two component transcriptional regulator, LuxR family  53.18 
 
 
218 aa  207  8e-53  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_2133  two component transcriptional regulator, LuxR family  54.59 
 
 
214 aa  207  1e-52  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_2506  response regulator receiver protein  54.34 
 
 
223 aa  207  1e-52  Streptosporangium roseum DSM 43021  Bacteria  normal  0.189025  normal  0.663488 
 
 
-
 
NC_013510  Tcur_4729  two component transcriptional regulator, LuxR family  54.13 
 
 
212 aa  203  1e-51  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_2389  two component transcriptional regulator, LuxR family  51.6 
 
 
215 aa  203  1e-51  Conexibacter woesei DSM 14684  Bacteria  normal  0.205007  decreased coverage  0.00115827 
 
 
-
 
NC_009921  Franean1_0340  two component LuxR family transcriptional regulator  52.73 
 
 
221 aa  203  2e-51  Frankia sp. EAN1pec  Bacteria  normal  normal  0.0115466 
 
 
-
 
NC_013093  Amir_2757  two component transcriptional regulator, LuxR family  59.55 
 
 
214 aa  200  9.999999999999999e-51  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0593961  n/a   
 
 
-
 
NC_013510  Tcur_4661  two component transcriptional regulator, LuxR family  55.91 
 
 
220 aa  200  1.9999999999999998e-50  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_0320  two component transcriptional regulator, LuxR family  52.27 
 
 
218 aa  199  1.9999999999999998e-50  Conexibacter woesei DSM 14684  Bacteria  normal  0.308686  normal  0.0930841 
 
 
-
 
NC_013757  Gobs_2541  two component transcriptional regulator, LuxR family  50.45 
 
 
215 aa  199  1.9999999999999998e-50  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.92112  n/a   
 
 
-
 
NC_013739  Cwoe_4605  two component transcriptional regulator, LuxR family  56.22 
 
 
222 aa  199  3e-50  Conexibacter woesei DSM 14684  Bacteria  normal  0.554224  normal 
 
 
-
 
NC_013235  Namu_2928  two component transcriptional regulator, LuxR family  52.97 
 
 
243 aa  198  3.9999999999999996e-50  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.000012449  hitchhiker  0.0000084288 
 
 
-
 
NC_013595  Sros_4416  response regulator receiver protein  53.64 
 
 
228 aa  196  2.0000000000000003e-49  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0335955 
 
 
-
 
NC_013093  Amir_2699  two component transcriptional regulator, LuxR family  52.51 
 
 
226 aa  196  2.0000000000000003e-49  Actinosynnema mirum DSM 43827  Bacteria  hitchhiker  0.000000630711  n/a   
 
 
-
 
NC_013947  Snas_4725  two component transcriptional regulator, LuxR family  53.92 
 
 
218 aa  196  2.0000000000000003e-49  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.37253  normal 
 
 
-
 
NC_013595  Sros_3199  response regulator receiver protein  53.92 
 
 
212 aa  196  3e-49  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_0810  two component transcriptional regulator, LuxR family  49.1 
 
 
219 aa  195  4.0000000000000005e-49  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_11890  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  49.08 
 
 
213 aa  195  5.000000000000001e-49  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_9330  response regulator receiver protein  54.59 
 
 
221 aa  193  2e-48  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.603744 
 
 
-
 
NC_008541  Arth_3490  two component LuxR family transcriptional regulator  54.95 
 
 
218 aa  193  2e-48  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_1917  two component transcriptional regulator, LuxR family  52.02 
 
 
215 aa  192  4e-48  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_2073  two component LuxR family transcriptional regulator  48.4 
 
 
217 aa  191  6e-48  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.776481 
 
 
-
 
NC_009921  Franean1_7225  two component LuxR family transcriptional regulator  50 
 
 
229 aa  190  2e-47  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_4332  two component LuxR family transcriptional regulator  54.75 
 
 
225 aa  189  2e-47  Frankia sp. EAN1pec  Bacteria  decreased coverage  0.00650273  normal 
 
 
-
 
NC_013093  Amir_0530  two component transcriptional regulator, LuxR family  52.73 
 
 
214 aa  188  7e-47  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0201422  n/a   
 
 
-
 
NC_009921  Franean1_6700  two component LuxR family transcriptional regulator  51.36 
 
 
257 aa  187  2e-46  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_1460  two component transcriptional regulator, LuxR family  51.36 
 
 
224 aa  186  2e-46  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.659068  n/a   
 
 
-
 
NC_013131  Caci_4455  two component transcriptional regulator, LuxR family  52.75 
 
 
213 aa  185  4e-46  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013169  Ksed_17580  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  51.14 
 
 
211 aa  184  1.0000000000000001e-45  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.0315732  normal  0.450672 
 
 
-
 
NC_013739  Cwoe_3050  two component transcriptional regulator, LuxR family  47.95 
 
 
214 aa  184  1.0000000000000001e-45  Conexibacter woesei DSM 14684  Bacteria  normal  0.127757  normal 
 
 
-
 
NC_013169  Ksed_07220  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  52.97 
 
 
226 aa  182  2.0000000000000003e-45  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal  0.740026 
 
 
-
 
NC_013739  Cwoe_5165  two component transcriptional regulator, LuxR family  49.77 
 
 
214 aa  181  8.000000000000001e-45  Conexibacter woesei DSM 14684  Bacteria  normal  0.852017  normal 
 
 
-
 
NC_013947  Snas_2641  two component transcriptional regulator, LuxR family  50 
 
 
220 aa  179  4e-44  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.53526  normal 
 
 
-
 
NC_013235  Namu_3029  two component transcriptional regulator, LuxR family  44.95 
 
 
815 aa  174  6e-43  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00871852  hitchhiker  0.00628617 
 
 
-
 
NC_014210  Ndas_0307  two component transcriptional regulator, LuxR family  51.61 
 
 
214 aa  175  6e-43  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.115356  normal  0.300779 
 
 
-
 
NC_009664  Krad_4020  two component transcriptional regulator, LuxR family  60.12 
 
 
215 aa  174  8e-43  Kineococcus radiotolerans SRS30216  Bacteria  hitchhiker  0.000894251  normal  0.0789775 
 
 
-
 
NC_009921  Franean1_6494  two component LuxR family transcriptional regulator  47.53 
 
 
235 aa  171  5.999999999999999e-42  Frankia sp. EAN1pec  Bacteria  normal  0.0149487  normal  0.504125 
 
 
-
 
NC_007777  Francci3_0084  two component LuxR family transcriptional regulator  49.09 
 
 
239 aa  171  6.999999999999999e-42  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_4689  two component transcriptional regulator, LuxR family  52.97 
 
 
216 aa  171  6.999999999999999e-42  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_014158  Tpau_0972  two component transcriptional regulator, LuxR family  49.77 
 
 
208 aa  168  5e-41  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_5906  two component LuxR family transcriptional regulator  47.75 
 
 
228 aa  168  7e-41  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.363446  normal 
 
 
-
 
NC_009338  Mflv_0968  two component LuxR family transcriptional regulator  49.11 
 
 
220 aa  167  1e-40  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_1746  two component transcriptional regulator, LuxR family  45 
 
 
222 aa  157  1e-37  Nakamurella multipartita DSM 44233  Bacteria  normal  0.139209  normal  0.0305301 
 
 
-
 
NC_013739  Cwoe_0318  two component transcriptional regulator, LuxR family  48.23 
 
 
221 aa  157  2e-37  Conexibacter woesei DSM 14684  Bacteria  normal  0.29485  normal  0.172489 
 
 
-
 
NC_009921  Franean1_2504  two component LuxR family transcriptional regulator  43.58 
 
 
218 aa  156  2e-37  Frankia sp. EAN1pec  Bacteria  decreased coverage  0.00866313  normal 
 
 
-
 
NC_013739  Cwoe_1501  two component transcriptional regulator, LuxR family  40.54 
 
 
228 aa  145  5e-34  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.138703 
 
 
-
 
NC_013595  Sros_0503  response regulator receiver protein  43.67 
 
 
226 aa  141  8e-33  Streptosporangium roseum DSM 43021  Bacteria  normal  0.544154  normal 
 
 
-
 
NC_009921  Franean1_6440  adenylate/guanylate cyclase  39.2 
 
 
463 aa  107  1e-22  Frankia sp. EAN1pec  Bacteria  normal  0.084335  normal  0.0956308 
 
 
-
 
NC_013525  Tter_0300  two component transcriptional regulator, LuxR family  34.15 
 
 
224 aa  105  4e-22  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009767  Rcas_3262  two component LuxR family transcriptional regulator  35.12 
 
 
222 aa  105  6e-22  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.764026 
 
 
-
 
NC_009921  Franean1_2502  response regulator receiver protein  45.09 
 
 
233 aa  102  5e-21  Frankia sp. EAN1pec  Bacteria  normal  0.0151359  normal 
 
 
-
 
NC_009523  RoseRS_1984  two component LuxR family transcriptional regulator  34.63 
 
 
220 aa  102  6e-21  Roseiflexus sp. RS-1  Bacteria  normal  0.178457  normal  0.123783 
 
 
-
 
NC_013595  Sros_8146  response regulator receiver protein  37.81 
 
 
202 aa  97.8  1e-19  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.524184 
 
 
-
 
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