| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_1254 |
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| Symbol | |
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| ID | 8332589 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 1424280 |
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| End bp | 1424921 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644954401 |
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| Product | two component transcriptional regulator, LuxR family |
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| Protein accession | YP_003112020 |
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| Protein GI | 256390456 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGTGG TGATCGCCGA CGACTCCGTC CTCATCCGCG CGGGGGTGGT CCGGGTCCTG
GAGATCTCCG GGCACGAAGT GGTCGCCGAG ACCGGGGACG GCGCCTCGCT GCTGGCCGCC
GTGGCGACGC ACCGCCCCGA CGCGGTCGTG GTCGACGTCC GCATGCCCCC GACGTTCAAG
GACGAGGGCA TCGTCGCCGC GGTCCAGATC CGCGAACGCT TCCCGGCCAC CGCGGTCCTG
GTGCTGTCCC AGTTCGTCGA GGAGCGCTAC GCGACCGACC TGCTCGCCCG CGACACCACA
CGCGTCGGCT ATCTGCTCAA GGACCGCGTC GCCGACATCG ACTCCTTCAT CGAGTCCCTG
GAACGCGTCG CGGCCGGCGG CACGGCGCTG GACCCCGAAG TCGTCGCACA ACTCCTGGTC
CGCCGTCCCG CCGATCCCCT GGACCGCCTG ACCCCGCGCG AGCGCGACGT CCTGGCGCTG
ATGGCCGAGG GCCGGGCGAA CGGCGCGATC GCCGATGTGC TCGCGGTCAG CGAGAGCGCG
GTCGGCAAGC ACATCAACAA CATCTTCATG AAGCTCGACC TCCAGCCCGA TGACCTGGGG
CATCGTCGCG TGCTGGCCGT ATTGCGATAC CTGGCTGCGT AA
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| Protein sequence | MRVVIADDSV LIRAGVVRVL EISGHEVVAE TGDGASLLAA VATHRPDAVV VDVRMPPTFK
DEGIVAAVQI RERFPATAVL VLSQFVEERY ATDLLARDTT RVGYLLKDRV ADIDSFIESL
ERVAAGGTAL DPEVVAQLLV RRPADPLDRL TPRERDVLAL MAEGRANGAI ADVLAVSESA
VGKHINNIFM KLDLQPDDLG HRRVLAVLRY LAA
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