More than 300 homologs were found in PanDaTox collection
for query gene Namu_3029 on replicon NC_013235
Organism: Nakamurella multipartita DSM 44233



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013235  Namu_3029  two component transcriptional regulator, LuxR family  100 
 
 
815 aa  1574    Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00871852  hitchhiker  0.00628617 
 
 
-
 
NC_013235  Namu_0810  two component transcriptional regulator, LuxR family  56.22 
 
 
219 aa  222  1.9999999999999999e-56  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_2432  two component transcriptional regulator, LuxR family  52.15 
 
 
233 aa  189  2e-46  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.199835  normal  0.129248 
 
 
-
 
NC_013739  Cwoe_3717  two component transcriptional regulator, LuxR family  47.17 
 
 
217 aa  187  9e-46  Conexibacter woesei DSM 14684  Bacteria  normal  0.82478  normal 
 
 
-
 
NC_013510  Tcur_4661  two component transcriptional regulator, LuxR family  51.89 
 
 
220 aa  186  1.0000000000000001e-45  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_008726  Mvan_2073  two component LuxR family transcriptional regulator  47.89 
 
 
217 aa  186  1.0000000000000001e-45  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.776481 
 
 
-
 
NC_009664  Krad_3915  two component transcriptional regulator, LuxR family  49.77 
 
 
226 aa  185  2.0000000000000003e-45  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.161295  normal  0.0598624 
 
 
-
 
NC_013595  Sros_6137  response regulator receiver protein  50.94 
 
 
209 aa  185  3e-45  Streptosporangium roseum DSM 43021  Bacteria  normal  0.633642  normal  0.13111 
 
 
-
 
NC_013235  Namu_3862  two component transcriptional regulator, LuxR family  47.2 
 
 
213 aa  184  5.0000000000000004e-45  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00236143  normal 
 
 
-
 
NC_009380  Strop_0353  two component LuxR family transcriptional regulator  49.53 
 
 
213 aa  184  5.0000000000000004e-45  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_0198  two component transcriptional regulator, LuxR family  43.72 
 
 
218 aa  182  2e-44  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009953  Sare_0423  two component LuxR family transcriptional regulator  49.53 
 
 
213 aa  181  4e-44  Salinispora arenicola CNS-205  Bacteria  normal  0.450903  hitchhiker  0.0058743 
 
 
-
 
NC_014210  Ndas_2092  two component transcriptional regulator, LuxR family  49.29 
 
 
216 aa  179  2e-43  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_2541  two component transcriptional regulator, LuxR family  44.86 
 
 
215 aa  179  2e-43  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.92112  n/a   
 
 
-
 
NC_013510  Tcur_3933  two component transcriptional regulator, LuxR family  46.7 
 
 
218 aa  178  3e-43  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_009380  Strop_2758  response regulator receiver  46.01 
 
 
220 aa  178  4e-43  Salinispora tropica CNB-440  Bacteria  normal  0.21835  normal  0.0217102 
 
 
-
 
NC_013510  Tcur_4729  two component transcriptional regulator, LuxR family  47.2 
 
 
212 aa  177  5e-43  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_1653  response regulator receiver protein  45.79 
 
 
220 aa  177  5e-43  Streptosporangium roseum DSM 43021  Bacteria  normal  0.799733  normal 
 
 
-
 
NC_013093  Amir_0948  two component transcriptional regulator, LuxR family  45.28 
 
 
214 aa  176  9.999999999999999e-43  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_1254  two component transcriptional regulator, LuxR family  48.11 
 
 
213 aa  176  1.9999999999999998e-42  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_0263  two component LuxR family transcriptional regulator  43.66 
 
 
214 aa  175  2.9999999999999996e-42  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.103764 
 
 
-
 
NC_013739  Cwoe_3908  two component transcriptional regulator, LuxR family  45.07 
 
 
214 aa  175  2.9999999999999996e-42  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_2341  two component transcriptional regulator, LuxR family  46.05 
 
 
215 aa  175  3.9999999999999995e-42  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_1992  two component transcriptional regulator, LuxR family  47.17 
 
 
218 aa  174  3.9999999999999995e-42  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_2300  response regulator receiver protein  46.95 
 
 
213 aa  174  5.999999999999999e-42  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1359  two component transcriptional regulator, LuxR family  44.95 
 
 
219 aa  174  5.999999999999999e-42  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.323671 
 
 
-
 
NC_013595  Sros_4051  response regulator receiver protein  45.75 
 
 
214 aa  173  9e-42  Streptosporangium roseum DSM 43021  Bacteria  normal  hitchhiker  0.004601 
 
 
-
 
NC_013739  Cwoe_2389  two component transcriptional regulator, LuxR family  46.05 
 
 
215 aa  173  1e-41  Conexibacter woesei DSM 14684  Bacteria  normal  0.205007  decreased coverage  0.00115827 
 
 
-
 
NC_013172  Bfae_12650  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  45.54 
 
 
217 aa  172  2e-41  Brachybacterium faecium DSM 4810  Bacteria  normal  0.129544  n/a   
 
 
-
 
NC_013169  Ksed_17580  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  49.07 
 
 
211 aa  172  2e-41  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.0315732  normal  0.450672 
 
 
-
 
NC_009338  Mflv_2280  two component LuxR family transcriptional regulator  45.33 
 
 
214 aa  172  2e-41  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.92337  normal  0.457915 
 
 
-
 
NC_013172  Bfae_11890  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  44.34 
 
 
213 aa  171  4e-41  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_0610  two component transcriptional regulator, LuxR family  43.87 
 
 
215 aa  171  5e-41  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.440854 
 
 
-
 
NC_013739  Cwoe_3762  two component transcriptional regulator, LuxR family  47.71 
 
 
221 aa  169  1e-40  Conexibacter woesei DSM 14684  Bacteria  normal  0.355338  normal  0.813095 
 
 
-
 
NC_013530  Xcel_0244  two component transcriptional regulator, LuxR family  44.34 
 
 
216 aa  169  2e-40  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_3983  two component LuxR family transcriptional regulator  43.46 
 
 
214 aa  169  2e-40  Mycobacterium sp. KMS  Bacteria  normal  0.714996  normal 
 
 
-
 
NC_008726  Mvan_4386  two component LuxR family transcriptional regulator  45.24 
 
 
209 aa  169  2e-40  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_3924  two component LuxR family transcriptional regulator  43.46 
 
 
214 aa  169  2e-40  Mycobacterium sp. JLS  Bacteria  normal  normal  0.278782 
 
 
-
 
NC_013093  Amir_2699  two component transcriptional regulator, LuxR family  44.13 
 
 
226 aa  169  2e-40  Actinosynnema mirum DSM 43827  Bacteria  hitchhiker  0.000000630711  n/a   
 
 
-
 
NC_013131  Caci_0203  two component transcriptional regulator, LuxR family  43.4 
 
 
218 aa  169  2e-40  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_3517  two component transcriptional regulator, LuxR family  44.6 
 
 
214 aa  169  2.9999999999999998e-40  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.498529  normal 
 
 
-
 
NC_013521  Sked_09230  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  45.62 
 
 
218 aa  168  4e-40  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.310613 
 
 
-
 
NC_013947  Snas_2250  two component transcriptional regulator, LuxR family  43.19 
 
 
217 aa  167  5e-40  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137071 
 
 
-
 
NC_013739  Cwoe_4605  two component transcriptional regulator, LuxR family  47.17 
 
 
222 aa  167  1.0000000000000001e-39  Conexibacter woesei DSM 14684  Bacteria  normal  0.554224  normal 
 
 
-
 
NC_013131  Caci_0636  two component transcriptional regulator, LuxR family  44.6 
 
 
214 aa  166  2.0000000000000002e-39  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.583432 
 
 
-
 
NC_009921  Franean1_2299  two component LuxR family transcriptional regulator  44.02 
 
 
242 aa  165  4.0000000000000004e-39  Frankia sp. EAN1pec  Bacteria  normal  0.0379402  normal 
 
 
-
 
NC_009921  Franean1_7246  two component LuxR family transcriptional regulator  43.46 
 
 
215 aa  164  6e-39  Frankia sp. EAN1pec  Bacteria  normal  normal  0.172833 
 
 
-
 
NC_013595  Sros_6197  response regulator receiver protein  44.6 
 
 
215 aa  164  6e-39  Streptosporangium roseum DSM 43021  Bacteria  normal  0.376562  normal 
 
 
-
 
NC_009921  Franean1_0340  two component LuxR family transcriptional regulator  44.13 
 
 
221 aa  164  9e-39  Frankia sp. EAN1pec  Bacteria  normal  normal  0.0115466 
 
 
-
 
NC_014210  Ndas_1960  two component transcriptional regulator, LuxR family  43.66 
 
 
215 aa  164  9e-39  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000329107  hitchhiker  0.00000396613 
 
 
-
 
NC_008146  Mmcs_3909  two component LuxR family transcriptional regulator  42.86 
 
 
211 aa  163  1e-38  Mycobacterium sp. MCS  Bacteria  normal  0.755905  n/a   
 
 
-
 
NC_008726  Mvan_5906  two component LuxR family transcriptional regulator  43.58 
 
 
228 aa  162  2e-38  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.363446  normal 
 
 
-
 
NC_013131  Caci_4455  two component transcriptional regulator, LuxR family  48.36 
 
 
213 aa  162  3e-38  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_3331  two component transcriptional regulator, LuxR family  48.11 
 
 
216 aa  161  4e-38  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0226882  normal  0.21338 
 
 
-
 
NC_009338  Mflv_0968  two component LuxR family transcriptional regulator  43.12 
 
 
220 aa  161  6e-38  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_3545  LuxR family two component transcriptional regulator  43.46 
 
 
213 aa  160  8e-38  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.701363 
 
 
-
 
NC_013131  Caci_1917  two component transcriptional regulator, LuxR family  44.13 
 
 
215 aa  160  8e-38  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_6494  two component LuxR family transcriptional regulator  44.7 
 
 
235 aa  160  1e-37  Frankia sp. EAN1pec  Bacteria  normal  0.0149487  normal  0.504125 
 
 
-
 
NC_013530  Xcel_0212  two component transcriptional regulator, LuxR family  47.47 
 
 
218 aa  157  5.0000000000000005e-37  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_0320  two component transcriptional regulator, LuxR family  42.72 
 
 
218 aa  158  5.0000000000000005e-37  Conexibacter woesei DSM 14684  Bacteria  normal  0.308686  normal  0.0930841 
 
 
-
 
NC_009921  Franean1_4332  two component LuxR family transcriptional regulator  46.26 
 
 
225 aa  157  7e-37  Frankia sp. EAN1pec  Bacteria  decreased coverage  0.00650273  normal 
 
 
-
 
NC_013739  Cwoe_3050  two component transcriptional regulator, LuxR family  43.4 
 
 
214 aa  156  1e-36  Conexibacter woesei DSM 14684  Bacteria  normal  0.127757  normal 
 
 
-
 
NC_007333  Tfu_0330  LuxR response regulator receiver  44.13 
 
 
219 aa  156  1e-36  Thermobifida fusca YX  Bacteria  normal  0.673991  n/a   
 
 
-
 
NC_013595  Sros_9330  response regulator receiver protein  43.87 
 
 
221 aa  154  5e-36  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.603744 
 
 
-
 
NC_014210  Ndas_2133  two component transcriptional regulator, LuxR family  46.23 
 
 
214 aa  154  5e-36  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_1460  two component transcriptional regulator, LuxR family  43.4 
 
 
224 aa  153  1e-35  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.659068  n/a   
 
 
-
 
NC_008541  Arth_3490  two component LuxR family transcriptional regulator  45.12 
 
 
218 aa  153  1e-35  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_2506  response regulator receiver protein  40.85 
 
 
223 aa  152  2e-35  Streptosporangium roseum DSM 43021  Bacteria  normal  0.189025  normal  0.663488 
 
 
-
 
NC_013093  Amir_0530  two component transcriptional regulator, LuxR family  45.54 
 
 
214 aa  152  3e-35  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0201422  n/a   
 
 
-
 
NC_013093  Amir_2757  two component transcriptional regulator, LuxR family  46.7 
 
 
214 aa  151  4e-35  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0593961  n/a   
 
 
-
 
NC_009921  Franean1_7225  two component LuxR family transcriptional regulator  41.51 
 
 
229 aa  151  5e-35  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_8722  response regulator receiver protein  41.31 
 
 
210 aa  150  9e-35  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_4725  two component transcriptional regulator, LuxR family  41.31 
 
 
218 aa  150  1.0000000000000001e-34  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.37253  normal 
 
 
-
 
NC_013739  Cwoe_5165  two component transcriptional regulator, LuxR family  40.65 
 
 
214 aa  149  2.0000000000000003e-34  Conexibacter woesei DSM 14684  Bacteria  normal  0.852017  normal 
 
 
-
 
NC_013235  Namu_2928  two component transcriptional regulator, LuxR family  39.44 
 
 
243 aa  148  4.0000000000000006e-34  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.000012449  hitchhiker  0.0000084288 
 
 
-
 
NC_014151  Cfla_3103  two component transcriptional regulator, LuxR family  47.22 
 
 
223 aa  147  5e-34  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.156187  hitchhiker  0.000316121 
 
 
-
 
NC_013595  Sros_4416  response regulator receiver protein  43.66 
 
 
228 aa  147  8.000000000000001e-34  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0335955 
 
 
-
 
NC_013947  Snas_2641  two component transcriptional regulator, LuxR family  42.99 
 
 
220 aa  146  1e-33  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.53526  normal 
 
 
-
 
NC_013739  Cwoe_1501  two component transcriptional regulator, LuxR family  39.19 
 
 
228 aa  144  9e-33  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.138703 
 
 
-
 
NC_013093  Amir_4689  two component transcriptional regulator, LuxR family  46.26 
 
 
216 aa  141  4.999999999999999e-32  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_35890  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  44.34 
 
 
239 aa  140  1e-31  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.479689 
 
 
-
 
NC_014210  Ndas_0307  two component transcriptional regulator, LuxR family  46.73 
 
 
214 aa  139  3.0000000000000003e-31  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.115356  normal  0.300779 
 
 
-
 
NC_013530  Xcel_2524  two component transcriptional regulator, LuxR family  42.47 
 
 
228 aa  137  9.999999999999999e-31  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.0516799  n/a   
 
 
-
 
NC_014158  Tpau_0972  two component transcriptional regulator, LuxR family  41.12 
 
 
208 aa  136  9.999999999999999e-31  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_6700  two component LuxR family transcriptional regulator  42.79 
 
 
257 aa  136  9.999999999999999e-31  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_5645  two component transcriptional regulator, LuxR family  38.03 
 
 
215 aa  136  1.9999999999999998e-30  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.117498 
 
 
-
 
NC_009664  Krad_4020  two component transcriptional regulator, LuxR family  44.5 
 
 
215 aa  134  5e-30  Kineococcus radiotolerans SRS30216  Bacteria  hitchhiker  0.000894251  normal  0.0789775 
 
 
-
 
NC_013595  Sros_0503  response regulator receiver protein  42.27 
 
 
226 aa  134  6.999999999999999e-30  Streptosporangium roseum DSM 43021  Bacteria  normal  0.544154  normal 
 
 
-
 
NC_013595  Sros_3199  response regulator receiver protein  41.83 
 
 
212 aa  134  6.999999999999999e-30  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_1746  two component transcriptional regulator, LuxR family  41.67 
 
 
222 aa  133  2.0000000000000002e-29  Nakamurella multipartita DSM 44233  Bacteria  normal  0.139209  normal  0.0305301 
 
 
-
 
NC_007777  Francci3_0084  two component LuxR family transcriptional regulator  41.98 
 
 
239 aa  129  2.0000000000000002e-28  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_2504  two component LuxR family transcriptional regulator  36.49 
 
 
218 aa  129  2.0000000000000002e-28  Frankia sp. EAN1pec  Bacteria  decreased coverage  0.00866313  normal 
 
 
-
 
NC_013169  Ksed_07220  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  38.91 
 
 
226 aa  129  3e-28  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal  0.740026 
 
 
-
 
NC_013739  Cwoe_0318  two component transcriptional regulator, LuxR family  38.81 
 
 
221 aa  128  3e-28  Conexibacter woesei DSM 14684  Bacteria  normal  0.29485  normal  0.172489 
 
 
-
 
NC_013757  Gobs_2540  putative signal transduction histidine kinase  32.58 
 
 
570 aa  127  9e-28  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_0811  histidine kinase  32.83 
 
 
580 aa  122  3.9999999999999996e-26  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013525  Tter_0300  two component transcriptional regulator, LuxR family  33.33 
 
 
224 aa  98.2  5e-19  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009767  Rcas_3262  two component LuxR family transcriptional regulator  33.64 
 
 
222 aa  97.1  1e-18  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal  0.764026 
 
 
-
 
NC_013510  Tcur_4038  two component transcriptional regulator, LuxR family  31.45 
 
 
253 aa  96.3  2e-18  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_008578  Acel_1760  two component LuxR family transcriptional regulator  31.39 
 
 
303 aa  95.1  5e-18  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.887336 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>