More than 300 homologs were found in PanDaTox collection
for query gene Ksed_17580 on replicon NC_013169
Organism: Kytococcus sedentarius DSM 20547



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013169  Ksed_17580  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  100 
 
 
211 aa  412  1e-114  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.0315732  normal  0.450672 
 
 
-
 
NC_009953  Sare_0423  two component LuxR family transcriptional regulator  60.09 
 
 
213 aa  232  3e-60  Salinispora arenicola CNS-205  Bacteria  normal  0.450903  hitchhiker  0.0058743 
 
 
-
 
NC_009380  Strop_0353  two component LuxR family transcriptional regulator  59.15 
 
 
213 aa  228  4e-59  Salinispora tropica CNB-440  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_7246  two component LuxR family transcriptional regulator  55.14 
 
 
215 aa  221  4.9999999999999996e-57  Frankia sp. EAN1pec  Bacteria  normal  normal  0.172833 
 
 
-
 
NC_013595  Sros_6137  response regulator receiver protein  57.82 
 
 
209 aa  220  9.999999999999999e-57  Streptosporangium roseum DSM 43021  Bacteria  normal  0.633642  normal  0.13111 
 
 
-
 
NC_013093  Amir_0948  two component transcriptional regulator, LuxR family  54.03 
 
 
214 aa  219  1.9999999999999999e-56  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_3762  two component transcriptional regulator, LuxR family  55.35 
 
 
221 aa  216  2.9999999999999998e-55  Conexibacter woesei DSM 14684  Bacteria  normal  0.355338  normal  0.813095 
 
 
-
 
NC_008726  Mvan_0263  two component LuxR family transcriptional regulator  54.29 
 
 
214 aa  215  5e-55  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.103764 
 
 
-
 
NC_013595  Sros_2300  response regulator receiver protein  55.19 
 
 
213 aa  213  9.999999999999999e-55  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_3908  two component transcriptional regulator, LuxR family  52.11 
 
 
214 aa  213  1.9999999999999998e-54  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_3933  two component transcriptional regulator, LuxR family  55.66 
 
 
218 aa  213  1.9999999999999998e-54  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_3717  two component transcriptional regulator, LuxR family  53.3 
 
 
217 aa  213  1.9999999999999998e-54  Conexibacter woesei DSM 14684  Bacteria  normal  0.82478  normal 
 
 
-
 
NC_009380  Strop_2758  response regulator receiver  54.72 
 
 
220 aa  212  3.9999999999999995e-54  Salinispora tropica CNB-440  Bacteria  normal  0.21835  normal  0.0217102 
 
 
-
 
NC_008705  Mkms_3983  two component LuxR family transcriptional regulator  53.3 
 
 
214 aa  211  4.9999999999999996e-54  Mycobacterium sp. KMS  Bacteria  normal  0.714996  normal 
 
 
-
 
NC_009077  Mjls_3924  two component LuxR family transcriptional regulator  53.3 
 
 
214 aa  211  4.9999999999999996e-54  Mycobacterium sp. JLS  Bacteria  normal  normal  0.278782 
 
 
-
 
NC_013595  Sros_6197  response regulator receiver protein  53.95 
 
 
215 aa  209  2e-53  Streptosporangium roseum DSM 43021  Bacteria  normal  0.376562  normal 
 
 
-
 
NC_009664  Krad_3915  two component transcriptional regulator, LuxR family  54.25 
 
 
226 aa  209  2e-53  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.161295  normal  0.0598624 
 
 
-
 
NC_009338  Mflv_2280  two component LuxR family transcriptional regulator  54.25 
 
 
214 aa  209  3e-53  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.92337  normal  0.457915 
 
 
-
 
NC_013510  Tcur_4729  two component transcriptional regulator, LuxR family  52.36 
 
 
212 aa  208  4e-53  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_2432  two component transcriptional regulator, LuxR family  54.07 
 
 
233 aa  207  6e-53  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.199835  normal  0.129248 
 
 
-
 
NC_013131  Caci_1254  two component transcriptional regulator, LuxR family  53.55 
 
 
213 aa  206  3e-52  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_3862  two component transcriptional regulator, LuxR family  51.17 
 
 
213 aa  205  4e-52  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00236143  normal 
 
 
-
 
NC_008146  Mmcs_3909  two component LuxR family transcriptional regulator  52.15 
 
 
211 aa  204  8e-52  Mycobacterium sp. MCS  Bacteria  normal  0.755905  n/a   
 
 
-
 
NC_008726  Mvan_4386  two component LuxR family transcriptional regulator  54.55 
 
 
209 aa  204  9e-52  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_1960  two component transcriptional regulator, LuxR family  52.36 
 
 
215 aa  203  1e-51  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  unclonable  0.0000000329107  hitchhiker  0.00000396613 
 
 
-
 
NC_013172  Bfae_12650  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  50 
 
 
217 aa  202  2e-51  Brachybacterium faecium DSM 4810  Bacteria  normal  0.129544  n/a   
 
 
-
 
NC_013131  Caci_0198  two component transcriptional regulator, LuxR family  51.42 
 
 
218 aa  201  5e-51  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_2506  response regulator receiver protein  51.89 
 
 
223 aa  201  7e-51  Streptosporangium roseum DSM 43021  Bacteria  normal  0.189025  normal  0.663488 
 
 
-
 
NC_013595  Sros_1653  response regulator receiver protein  50.94 
 
 
220 aa  201  8e-51  Streptosporangium roseum DSM 43021  Bacteria  normal  0.799733  normal 
 
 
-
 
NC_013093  Amir_2699  two component transcriptional regulator, LuxR family  51.89 
 
 
226 aa  199  1.9999999999999998e-50  Actinosynnema mirum DSM 43827  Bacteria  hitchhiker  0.000000630711  n/a   
 
 
-
 
NC_014165  Tbis_3545  LuxR family two component transcriptional regulator  53.81 
 
 
213 aa  199  1.9999999999999998e-50  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.701363 
 
 
-
 
NC_013131  Caci_4455  two component transcriptional regulator, LuxR family  54.07 
 
 
213 aa  198  5e-50  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_09230  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  52.31 
 
 
218 aa  198  5e-50  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.310613 
 
 
-
 
NC_008726  Mvan_5906  two component LuxR family transcriptional regulator  52.29 
 
 
228 aa  197  7e-50  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.363446  normal 
 
 
-
 
NC_009664  Krad_1992  two component transcriptional regulator, LuxR family  55.4 
 
 
218 aa  197  1.0000000000000001e-49  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_3517  two component transcriptional regulator, LuxR family  52.31 
 
 
214 aa  196  2.0000000000000003e-49  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.498529  normal 
 
 
-
 
NC_013131  Caci_1917  two component transcriptional regulator, LuxR family  52.36 
 
 
215 aa  196  3e-49  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_4416  response regulator receiver protein  54.98 
 
 
228 aa  196  3e-49  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0335955 
 
 
-
 
NC_013131  Caci_0203  two component transcriptional regulator, LuxR family  49.76 
 
 
218 aa  195  4.0000000000000005e-49  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_5645  two component transcriptional regulator, LuxR family  51.43 
 
 
215 aa  194  6e-49  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.117498 
 
 
-
 
NC_013093  Amir_2757  two component transcriptional regulator, LuxR family  54.88 
 
 
214 aa  194  9e-49  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0593961  n/a   
 
 
-
 
NC_013595  Sros_4051  response regulator receiver protein  50 
 
 
214 aa  193  1e-48  Streptosporangium roseum DSM 43021  Bacteria  normal  hitchhiker  0.004601 
 
 
-
 
NC_012669  Bcav_1359  two component transcriptional regulator, LuxR family  51.6 
 
 
219 aa  193  2e-48  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.323671 
 
 
-
 
NC_014158  Tpau_0972  two component transcriptional regulator, LuxR family  52.13 
 
 
208 aa  193  2e-48  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_2341  two component transcriptional regulator, LuxR family  51.4 
 
 
215 aa  191  5e-48  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_0968  two component LuxR family transcriptional regulator  50.46 
 
 
220 aa  191  7e-48  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_0610  two component transcriptional regulator, LuxR family  49.06 
 
 
215 aa  191  8e-48  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.440854 
 
 
-
 
NC_013131  Caci_0636  two component transcriptional regulator, LuxR family  49.3 
 
 
214 aa  191  9e-48  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.583432 
 
 
-
 
NC_014210  Ndas_2092  two component transcriptional regulator, LuxR family  50.47 
 
 
216 aa  190  1e-47  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_2928  two component transcriptional regulator, LuxR family  47.17 
 
 
243 aa  189  2.9999999999999997e-47  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.000012449  hitchhiker  0.0000084288 
 
 
-
 
NC_013595  Sros_9330  response regulator receiver protein  52.13 
 
 
221 aa  189  2.9999999999999997e-47  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.603744 
 
 
-
 
NC_013510  Tcur_4661  two component transcriptional regulator, LuxR family  53.77 
 
 
220 aa  188  4e-47  Thermomonospora curvata DSM 43183  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_0320  two component transcriptional regulator, LuxR family  48.83 
 
 
218 aa  187  1e-46  Conexibacter woesei DSM 14684  Bacteria  normal  0.308686  normal  0.0930841 
 
 
-
 
NC_013947  Snas_2250  two component transcriptional regulator, LuxR family  50.47 
 
 
217 aa  186  2e-46  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.137071 
 
 
-
 
NC_014210  Ndas_2133  two component transcriptional regulator, LuxR family  52.83 
 
 
214 aa  186  3e-46  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_3029  two component transcriptional regulator, LuxR family  49.53 
 
 
815 aa  184  8e-46  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00871852  hitchhiker  0.00628617 
 
 
-
 
NC_013947  Snas_4725  two component transcriptional regulator, LuxR family  51.18 
 
 
218 aa  183  1.0000000000000001e-45  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.37253  normal 
 
 
-
 
NC_013947  Snas_2641  two component transcriptional regulator, LuxR family  49.07 
 
 
220 aa  183  1.0000000000000001e-45  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.53526  normal 
 
 
-
 
NC_013093  Amir_4689  two component transcriptional regulator, LuxR family  55.66 
 
 
216 aa  182  4.0000000000000006e-45  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_8722  response regulator receiver protein  50.24 
 
 
210 aa  182  5.0000000000000004e-45  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_0212  two component transcriptional regulator, LuxR family  51.83 
 
 
218 aa  181  8.000000000000001e-45  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_11890  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  46.45 
 
 
213 aa  181  8.000000000000001e-45  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_0307  two component transcriptional regulator, LuxR family  53.55 
 
 
214 aa  180  1e-44  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.115356  normal  0.300779 
 
 
-
 
NC_013235  Namu_0810  two component transcriptional regulator, LuxR family  45.62 
 
 
219 aa  179  2e-44  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_0530  two component transcriptional regulator, LuxR family  50.47 
 
 
214 aa  179  2.9999999999999997e-44  Actinosynnema mirum DSM 43827  Bacteria  normal  0.0201422  n/a   
 
 
-
 
NC_009921  Franean1_2299  two component LuxR family transcriptional regulator  52.15 
 
 
242 aa  179  2.9999999999999997e-44  Frankia sp. EAN1pec  Bacteria  normal  0.0379402  normal 
 
 
-
 
NC_013739  Cwoe_4605  two component transcriptional regulator, LuxR family  51.9 
 
 
222 aa  177  8e-44  Conexibacter woesei DSM 14684  Bacteria  normal  0.554224  normal 
 
 
-
 
NC_009664  Krad_3331  two component transcriptional regulator, LuxR family  49.53 
 
 
216 aa  176  2e-43  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.0226882  normal  0.21338 
 
 
-
 
NC_013530  Xcel_0244  two component transcriptional regulator, LuxR family  47.93 
 
 
216 aa  176  3e-43  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_2541  two component transcriptional regulator, LuxR family  45.54 
 
 
215 aa  175  4e-43  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.92112  n/a   
 
 
-
 
NC_014151  Cfla_3103  two component transcriptional regulator, LuxR family  51.4 
 
 
223 aa  174  7e-43  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.156187  hitchhiker  0.000316121 
 
 
-
 
NC_013595  Sros_3199  response regulator receiver protein  51.66 
 
 
212 aa  173  1.9999999999999998e-42  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013739  Cwoe_3050  two component transcriptional regulator, LuxR family  45.07 
 
 
214 aa  172  2.9999999999999996e-42  Conexibacter woesei DSM 14684  Bacteria  normal  0.127757  normal 
 
 
-
 
NC_009921  Franean1_4332  two component LuxR family transcriptional regulator  48.58 
 
 
225 aa  172  3.9999999999999995e-42  Frankia sp. EAN1pec  Bacteria  decreased coverage  0.00650273  normal 
 
 
-
 
NC_008541  Arth_3490  two component LuxR family transcriptional regulator  46.51 
 
 
218 aa  171  5.999999999999999e-42  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_0330  LuxR response regulator receiver  48.36 
 
 
219 aa  170  2e-41  Thermobifida fusca YX  Bacteria  normal  0.673991  n/a   
 
 
-
 
NC_013530  Xcel_2524  two component transcriptional regulator, LuxR family  50.46 
 
 
228 aa  167  1e-40  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.0516799  n/a   
 
 
-
 
NC_013530  Xcel_1460  two component transcriptional regulator, LuxR family  46.26 
 
 
224 aa  165  4e-40  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.659068  n/a   
 
 
-
 
NC_013739  Cwoe_2389  two component transcriptional regulator, LuxR family  45.12 
 
 
215 aa  164  9e-40  Conexibacter woesei DSM 14684  Bacteria  normal  0.205007  decreased coverage  0.00115827 
 
 
-
 
NC_013595  Sros_0503  response regulator receiver protein  46.36 
 
 
226 aa  164  1.0000000000000001e-39  Streptosporangium roseum DSM 43021  Bacteria  normal  0.544154  normal 
 
 
-
 
NC_013521  Sked_35890  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  48.62 
 
 
239 aa  163  2.0000000000000002e-39  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.479689 
 
 
-
 
NC_008726  Mvan_2073  two component LuxR family transcriptional regulator  45.28 
 
 
217 aa  163  2.0000000000000002e-39  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.776481 
 
 
-
 
NC_013169  Ksed_07220  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  47.44 
 
 
226 aa  162  3e-39  Kytococcus sedentarius DSM 20547  Bacteria  normal  normal  0.740026 
 
 
-
 
NC_009664  Krad_4020  two component transcriptional regulator, LuxR family  52.36 
 
 
215 aa  162  4.0000000000000004e-39  Kineococcus radiotolerans SRS30216  Bacteria  hitchhiker  0.000894251  normal  0.0789775 
 
 
-
 
NC_013739  Cwoe_5165  two component transcriptional regulator, LuxR family  42.92 
 
 
214 aa  162  5.0000000000000005e-39  Conexibacter woesei DSM 14684  Bacteria  normal  0.852017  normal 
 
 
-
 
NC_009921  Franean1_6494  two component LuxR family transcriptional regulator  45.58 
 
 
235 aa  160  1e-38  Frankia sp. EAN1pec  Bacteria  normal  0.0149487  normal  0.504125 
 
 
-
 
NC_013235  Namu_1746  two component transcriptional regulator, LuxR family  44.86 
 
 
222 aa  157  2e-37  Nakamurella multipartita DSM 44233  Bacteria  normal  0.139209  normal  0.0305301 
 
 
-
 
NC_013739  Cwoe_0318  two component transcriptional regulator, LuxR family  45.79 
 
 
221 aa  152  2.9999999999999998e-36  Conexibacter woesei DSM 14684  Bacteria  normal  0.29485  normal  0.172489 
 
 
-
 
NC_009921  Franean1_0340  two component LuxR family transcriptional regulator  41.98 
 
 
221 aa  152  4e-36  Frankia sp. EAN1pec  Bacteria  normal  normal  0.0115466 
 
 
-
 
NC_009921  Franean1_7225  two component LuxR family transcriptional regulator  42.99 
 
 
229 aa  150  1e-35  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_2504  two component LuxR family transcriptional regulator  41.71 
 
 
218 aa  147  2.0000000000000003e-34  Frankia sp. EAN1pec  Bacteria  decreased coverage  0.00866313  normal 
 
 
-
 
NC_013739  Cwoe_1501  two component transcriptional regulator, LuxR family  40.93 
 
 
228 aa  144  1e-33  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.138703 
 
 
-
 
NC_009921  Franean1_6700  two component LuxR family transcriptional regulator  43.26 
 
 
257 aa  143  2e-33  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_0084  two component LuxR family transcriptional regulator  42.25 
 
 
239 aa  127  2.0000000000000002e-28  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_011901  Tgr7_2171  two component transcriptional regulator, LuxR family  35 
 
 
227 aa  108  7.000000000000001e-23  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_3936  two component LuxR family transcriptional regulator  36.68 
 
 
213 aa  102  3e-21  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00507176  n/a   
 
 
-
 
NC_010320  Teth514_2042  two component LuxR family transcriptional regulator  31.78 
 
 
208 aa  102  3e-21  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_5644  two component transcriptional regulator, LuxR family  34.56 
 
 
225 aa  101  7e-21  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.114252 
 
 
-
 
NC_007412  Ava_C0116  two component LuxR family transcriptional regulator  33.96 
 
 
209 aa  100  1e-20  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_009012  Cthe_1267  two component LuxR family transcriptional regulator  33 
 
 
216 aa  100  2e-20  Clostridium thermocellum ATCC 27405  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>