Gene Sked_35890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_35890 
Symbol 
ID8635222 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp4015474 
End bp4016193 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content73% 
IMG OID 
Productresponse regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
Protein accessionYP_003316309 
Protein GI269796854 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.479689 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCACGTCG TGATCACCGA GGACTCGGTC CTCCTGCTGG ACGGGCTCAC CCGGCTGCTG 
GTCGCCGAGG GGCACACCGT CACCGGGTAC CGCTCGGCCG ACGAGCTCGT CGCCGCCTTC
GCGCACCTGA CGGTCGACCA GCTCCCCGAC GTCCTCGTGA CGGACGTCCG TATGCCGCCG
ACGCACACCG ACGAGGGCCT GCGCGCCGCT GTCCACCTGC GCAGCCTGCA CCCGGGCCTG
CCCGTCCTCG TGCTGTCGCA GTACGTCGAG CAGCGCTACG CGACCGAGCT GTTCGCCGGC
GACGTGCGCG CGCTCGGCTA CGTGCTCAAG GACCGCGTGG CCGACGTCGA CGACTTCCTC
GACGCGCTCG GCCGGGTCGC CGGCGGCGGC ACGGTGATCG ACCCCGAGGT CGTGTCCCAG
CTGCTGGCCC GCACCCGCGG GACCGGCGTC GACAGGCTCA CGGCGCGTGA GCGCGAGGTG
CTCGGCCTCA TGGCCGAGGG ACGCTCCAAC GGGGCGATCG CCGAGCTGCT GGTGGTCGGG
ACCGCGGCCG TCGAGAAGCA CGTGACCTCC ATCCTCACCA AGCTCGACCT CGCGCCGGAC
GCCGACGACC ACCGCCGCGT GCTCGCCGTG CTGCGCTGGC TCGAGCACGC ACCGTCGCAG
CACCCGACCT CTCAGCACGA CCGCTCCCAG CACGACCCTT CCCGAGGAGA CCGACCATGA
 
Protein sequence
MHVVITEDSV LLLDGLTRLL VAEGHTVTGY RSADELVAAF AHLTVDQLPD VLVTDVRMPP 
THTDEGLRAA VHLRSLHPGL PVLVLSQYVE QRYATELFAG DVRALGYVLK DRVADVDDFL
DALGRVAGGG TVIDPEVVSQ LLARTRGTGV DRLTAREREV LGLMAEGRSN GAIAELLVVG
TAAVEKHVTS ILTKLDLAPD ADDHRRVLAV LRWLEHAPSQ HPTSQHDRSQ HDPSRGDRP