More than 300 homologs were found in PanDaTox collection
for query gene Mchl_4201 on replicon NC_011757
Organism: Methylobacterium chloromethanicum CM4



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011757  Mchl_4201  binding-protein-dependent transport systems inner membrane component  100 
 
 
305 aa  601  1.0000000000000001e-171  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_010510  Mrad2831_6154  binding-protein-dependent transport systems inner membrane component  77.03 
 
 
295 aa  444  1.0000000000000001e-124  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_007778  RPB_1473  binding-protein dependent transport system inner membrane protein  67.73 
 
 
306 aa  384  1e-106  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0411979  normal 
 
 
-
 
NC_009720  Xaut_2085  binding-protein-dependent transport systems inner membrane component  67.12 
 
 
319 aa  382  1e-105  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.0787698 
 
 
-
 
NC_007406  Nwi_0673  binding-protein dependent transport system inner membrane protein  49.6 
 
 
275 aa  244  1.9999999999999999e-63  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.0666321  normal  0.331074 
 
 
-
 
NC_010172  Mext_3346  binding-protein-dependent transport systems inner membrane component  47.64 
 
 
291 aa  239  4e-62  Methylobacterium extorquens PA1  Bacteria  normal  0.252204  normal 
 
 
-
 
NC_011757  Mchl_3671  binding-protein-dependent transport systems inner membrane component  52.27 
 
 
287 aa  233  3e-60  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.0347715  normal 
 
 
-
 
NC_008062  Bcen_6102  binding-protein-dependent transport systems inner membrane component  47.97 
 
 
291 aa  231  1e-59  Burkholderia cenocepacia AU 1054  Bacteria  normal  n/a   
 
 
-
 
NC_008542  Bcen2424_1975  binding-protein-dependent transport systems inner membrane component  47.97 
 
 
291 aa  231  1e-59  Burkholderia cenocepacia HI2424  Bacteria  normal  0.690359  n/a   
 
 
-
 
NC_010725  Mpop_4185  binding-protein-dependent transport systems inner membrane component  51.06 
 
 
283 aa  228  8e-59  Methylobacterium populi BJ001  Bacteria  normal  0.321257  normal 
 
 
-
 
NC_002947  PP_0208  nitrate ABC transporter, permease protein, putative  47.97 
 
 
260 aa  226  3e-58  Pseudomonas putida KT2440  Bacteria  normal  normal  0.473726 
 
 
-
 
NC_010508  Bcenmc03_1999  binding-protein-dependent transport systems inner membrane component  47.97 
 
 
291 aa  224  2e-57  Burkholderia cenocepacia MC0-3  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_3787  binding-protein-dependent transport systems inner membrane component  45.67 
 
 
314 aa  215  5.9999999999999996e-55  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_007492  Pfl01_3160  binding-protein dependent transport system inner membrane protein  45.08 
 
 
274 aa  215  8e-55  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.913146  normal 
 
 
-
 
NC_010501  PputW619_5010  binding-protein-dependent transport systems inner membrane component  47.58 
 
 
260 aa  213  2.9999999999999995e-54  Pseudomonas putida W619  Bacteria  normal  normal 
 
 
-
 
NC_010084  Bmul_1295  binding-protein-dependent transport systems inner membrane component  48.54 
 
 
290 aa  210  3e-53  Burkholderia multivorans ATCC 17616  Bacteria  normal  0.0425684  normal  0.379949 
 
 
-
 
NC_008825  Mpe_A0924  ABC transporter permease protein  44.44 
 
 
258 aa  206  3e-52  Methylibium petroleiphilum PM1  Bacteria  normal  0.175022  normal 
 
 
-
 
NC_008554  Sfum_2218  binding-protein-dependent transport systems inner membrane component  41.34 
 
 
290 aa  204  1e-51  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal  0.484673 
 
 
-
 
NC_008554  Sfum_2216  binding-protein-dependent transport systems inner membrane component  43.4 
 
 
314 aa  204  2e-51  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.82677  normal  0.484673 
 
 
-
 
NC_009485  BBta_4879  putative ABC transporter, permease protein  43.25 
 
 
263 aa  200  1.9999999999999998e-50  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.132635 
 
 
-
 
NC_008825  Mpe_A0926  nitrate ABC transporter, permease protein, putative  38.81 
 
 
274 aa  175  7e-43  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_0397  binding-protein-dependent transport systems inner membrane component  38.33 
 
 
285 aa  158  1e-37  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.987071 
 
 
-
 
NC_004311  BRA1188  taurine ABC transporter, permease protein  40.79 
 
 
250 aa  155  7e-37  Brucella suis 1330  Bacteria  normal  0.0612406  n/a   
 
 
-
 
NC_009634  Mevan_0512  binding-protein-dependent transport systems inner membrane component  40.21 
 
 
253 aa  152  5.9999999999999996e-36  Methanococcus vannielii SB  Archaea  normal  n/a   
 
 
-
 
NC_014150  Bmur_0154  binding-protein-dependent transport systems inner membrane component  34.1 
 
 
264 aa  152  7e-36  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_009635  Maeo_0992  binding-protein-dependent transport systems inner membrane component  36.21 
 
 
254 aa  150  3e-35  Methanococcus aeolicus Nankai-3  Archaea  normal  n/a   
 
 
-
 
NC_011832  Mpal_1076  binding-protein-dependent transport systems inner membrane component  35.66 
 
 
269 aa  149  8e-35  Methanosphaerula palustris E1-9c  Archaea  normal  0.406887  normal  0.454808 
 
 
-
 
NC_010511  M446_0464  binding-protein-dependent transport systems inner membrane component  37.23 
 
 
288 aa  148  1.0000000000000001e-34  Methylobacterium sp. 4-46  Bacteria  normal  0.349721  hitchhiker  0.00645779 
 
 
-
 
NC_008786  Veis_1108  binding-protein-dependent transport systems inner membrane component  35.51 
 
 
255 aa  147  2.0000000000000003e-34  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal  0.135552 
 
 
-
 
NC_009485  BBta_6545  ABC transporter permease  37.23 
 
 
269 aa  147  3e-34  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.276106 
 
 
-
 
NC_009135  MmarC5_0393  binding-protein-dependent transport systems inner membrane component  44.12 
 
 
253 aa  146  5e-34  Methanococcus maripaludis C5  Archaea  normal  0.0876322  n/a   
 
 
-
 
NC_002947  PP_0231  binding-protein-dependent transport systems inner membrane component  34.21 
 
 
279 aa  145  1e-33  Pseudomonas putida KT2440  Bacteria  normal  0.33405  hitchhiker  0.000710194 
 
 
-
 
NC_009975  MmarC6_1476  binding-protein-dependent transport systems inner membrane component  42.94 
 
 
253 aa  144  2e-33  Methanococcus maripaludis C6  Archaea  normal  n/a   
 
 
-
 
NC_009637  MmarC7_0444  binding-protein-dependent transport systems inner membrane component  42.35 
 
 
253 aa  143  3e-33  Methanococcus maripaludis C7  Archaea  normal  normal 
 
 
-
 
NC_010505  Mrad2831_4568  binding-protein-dependent transport systems inner membrane component  38.91 
 
 
286 aa  142  6e-33  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_1127  binding-protein-dependent transport systems inner membrane component  35.71 
 
 
267 aa  142  8e-33  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_011887  Mnod_7932  binding-protein-dependent transport systems inner membrane component  35.42 
 
 
283 aa  142  8e-33  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_4641  binding-protein-dependent transport systems inner membrane component  35.39 
 
 
277 aa  142  9.999999999999999e-33  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.750363  n/a   
 
 
-
 
NC_011729  PCC7424_3526  nitrate ABC transporter, inner membrane subunit  32.23 
 
 
280 aa  141  9.999999999999999e-33  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.471487 
 
 
-
 
NC_009512  Pput_0246  binding-protein-dependent transport systems inner membrane component  36.24 
 
 
279 aa  141  1.9999999999999998e-32  Pseudomonas putida F1  Bacteria  normal  0.0570948  normal  0.0921514 
 
 
-
 
NC_004578  PSPTO_5321  taurine ABC transporter, permease protein  36.7 
 
 
285 aa  140  3e-32  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_014150  Bmur_0403  binding-protein-dependent transport systems inner membrane component  31.56 
 
 
256 aa  140  3e-32  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_3065  binding-protein-dependent transport systems inner membrane component  35.93 
 
 
280 aa  140  3e-32  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.228654 
 
 
-
 
NC_007953  Bxe_C0735  nitrate/sulfonate/bicarbonate ABC transporter inner membrane protein  34.04 
 
 
273 aa  140  3e-32  Burkholderia xenovorans LB400  Bacteria  normal  0.714635  normal 
 
 
-
 
NC_011757  Mchl_1261  binding-protein-dependent transport systems inner membrane component  38.73 
 
 
293 aa  140  3e-32  Methylobacterium chloromethanicum CM4  Bacteria  normal  0.113651  normal 
 
 
-
 
NC_009720  Xaut_4051  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
273 aa  140  3e-32  Xanthobacter autotrophicus Py2  Bacteria  normal  normal  0.395379 
 
 
-
 
NC_007644  Moth_1974  binding-protein dependent transport system inner membrane protein  36.84 
 
 
261 aa  139  3.9999999999999997e-32  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.000000226251  normal 
 
 
-
 
NC_007778  RPB_1488  binding-protein dependent transport system inner membrane protein  36.32 
 
 
280 aa  139  4.999999999999999e-32  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.106569  normal  0.790334 
 
 
-
 
NC_009428  Rsph17025_0765  binding-protein-dependent transport systems inner membrane component  36.13 
 
 
265 aa  139  7e-32  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_009675  Anae109_3869  binding-protein-dependent transport systems inner membrane component  36.82 
 
 
274 aa  138  1e-31  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_013889  TK90_0666  nitrate ABC transporter, inner membrane subunit  29.57 
 
 
311 aa  138  1e-31  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.0569164  decreased coverage  0.0039857 
 
 
-
 
NC_007492  Pfl01_0254  binding-protein dependent transport system inner membrane protein  31.9 
 
 
279 aa  138  1e-31  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal  0.57663 
 
 
-
 
NC_010501  PputW619_4981  binding-protein-dependent transport systems inner membrane component  33.7 
 
 
279 aa  137  2e-31  Pseudomonas putida W619  Bacteria  normal  normal  0.588836 
 
 
-
 
NC_011757  Mchl_1422  binding-protein-dependent transport systems inner membrane component  38.3 
 
 
273 aa  137  2e-31  Methylobacterium chloromethanicum CM4  Bacteria  normal  normal 
 
 
-
 
NC_013161  Cyan8802_4458  nitrate ABC transporter, inner membrane subunit  33.33 
 
 
277 aa  137  2e-31  Cyanothece sp. PCC 8802  Bacteria  normal  0.698055  normal  0.534513 
 
 
-
 
NC_010172  Mext_1261  binding-protein-dependent transport systems inner membrane component  38.3 
 
 
273 aa  137  2e-31  Methylobacterium extorquens PA1  Bacteria  normal  normal  0.306936 
 
 
-
 
NC_007644  Moth_1982  binding-protein dependent transport system inner membrane protein  35.02 
 
 
266 aa  137  2e-31  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.187248  normal 
 
 
-
 
NC_011726  PCC8801_4395  nitrate ABC transporter, inner membrane subunit  33.33 
 
 
277 aa  137  2e-31  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_008340  Mlg_1704  nitrate ABC transporter, inner membrane subunit  27.87 
 
 
311 aa  137  2e-31  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  normal 
 
 
-
 
NC_008340  Mlg_2588  nitrate ABC transporter, inner membrane subunit  31.03 
 
 
279 aa  137  2e-31  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  hitchhiker  0.00171927 
 
 
-
 
NC_010322  PputGB1_0255  binding-protein-dependent transport systems inner membrane component  36.7 
 
 
279 aa  137  2e-31  Pseudomonas putida GB-1  Bacteria  normal  0.796344  normal 
 
 
-
 
NC_009436  Ent638_2324  nitrate ABC transporter, inner membrane subunit  31.06 
 
 
293 aa  137  3.0000000000000003e-31  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_1211  binding-protein-dependent transport systems inner membrane component  35.93 
 
 
273 aa  137  3.0000000000000003e-31  Methylobacterium populi BJ001  Bacteria  normal  0.132759  normal  0.452833 
 
 
-
 
NC_013521  Sked_16930  ABC-type nitrate/sulfonate/bicarbonate transport system, permease component  32.9 
 
 
322 aa  137  3.0000000000000003e-31  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.327  normal  0.410158 
 
 
-
 
NC_011769  DvMF_0521  binding-protein-dependent transport systems inner membrane component  33.47 
 
 
292 aa  135  7.000000000000001e-31  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.367955 
 
 
-
 
NC_009439  Pmen_2104  nitrate ABC transporter, inner membrane subunit  30.04 
 
 
283 aa  135  9e-31  Pseudomonas mendocina ymp  Bacteria  normal  0.0291571  normal  0.0240092 
 
 
-
 
NC_009075  BURPS668_A2220  taurine ABC transporter, permease protein  34.55 
 
 
283 aa  135  9e-31  Burkholderia pseudomallei 668  Bacteria  normal  0.215273  n/a   
 
 
-
 
NC_009079  BMA10247_A0697  taurine ABC transporter, permease protein  34.4 
 
 
283 aa  134  9.999999999999999e-31  Burkholderia mallei NCTC 10247  Bacteria  normal  n/a   
 
 
-
 
NC_008835  BMA10229_2019  taurine ABC transporter, permease protein  34.4 
 
 
285 aa  135  9.999999999999999e-31  Burkholderia mallei NCTC 10229  Bacteria  normal  0.484134  n/a   
 
 
-
 
NC_009078  BURPS1106A_A2133  taurine ABC transporter, permease protein  34.55 
 
 
283 aa  135  9.999999999999999e-31  Burkholderia pseudomallei 1106a  Bacteria  normal  0.186654  n/a   
 
 
-
 
NC_007435  BURPS1710b_A0620  permease component of taurine ABC transporter  34.55 
 
 
253 aa  134  9.999999999999999e-31  Burkholderia pseudomallei 1710b  Bacteria  decreased coverage  0.00192231  n/a   
 
 
-
 
NC_006349  BMAA1580  taurine ABC transporter, permease protein  34.4 
 
 
253 aa  134  1.9999999999999998e-30  Burkholderia mallei ATCC 23344  Bacteria  normal  0.477521  n/a   
 
 
-
 
NC_010625  Bphy_6203  binding-protein-dependent transport systems inner membrane component  33.59 
 
 
284 aa  134  1.9999999999999998e-30  Burkholderia phymatum STM815  Bacteria  normal  0.780444  normal  0.280504 
 
 
-
 
NC_009832  Spro_2908  nitrate ABC transporter, inner membrane subunit  29.14 
 
 
298 aa  133  3.9999999999999996e-30  Serratia proteamaculans 568  Bacteria  normal  0.950821  normal 
 
 
-
 
NC_009708  YpsIP31758_1848  ABC transporter permease  34.65 
 
 
273 aa  132  5e-30  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_5414  putative nitrate ABC transporter (permease protein) (ntrB-like protein)  30.48 
 
 
279 aa  132  5e-30  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.481789  normal 
 
 
-
 
NC_010524  Lcho_3842  nitrate ABC transporter, inner membrane subunit  30.77 
 
 
331 aa  132  5e-30  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_010465  YPK_1957  binding-protein-dependent transport systems inner membrane component  34.65 
 
 
273 aa  132  5e-30  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_2953  binding-protein-dependent transport systems inner membrane component  33.72 
 
 
294 aa  132  1.0000000000000001e-29  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_2566  ABC transporter, membrane subunit  35.48 
 
 
252 aa  131  1.0000000000000001e-29  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.345232 
 
 
-
 
NC_007908  Rfer_2555  nitrate transport permease  30.33 
 
 
314 aa  130  2.0000000000000002e-29  Rhodoferax ferrireducens T118  Bacteria  normal  0.162104  n/a   
 
 
-
 
NC_011368  Rleg2_4471  nitrate ABC transporter, inner membrane subunit  28.47 
 
 
297 aa  130  2.0000000000000002e-29  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.5689 
 
 
-
 
NC_013889  TK90_0963  nitrate ABC transporter, inner membrane subunit  29.74 
 
 
281 aa  131  2.0000000000000002e-29  Thioalkalivibrio sp. K90mix  Bacteria  normal  normal  0.563275 
 
 
-
 
NC_008639  Cpha266_0145  binding-protein-dependent transport systems inner membrane component  30.8 
 
 
266 aa  130  2.0000000000000002e-29  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A1391  NO3-/NO2- ABC transporter  28.63 
 
 
305 aa  130  3e-29  Methylibium petroleiphilum PM1  Bacteria  normal  normal  0.36361 
 
 
-
 
NC_012917  PC1_2732  nitrate ABC transporter, inner membrane subunit  29.14 
 
 
304 aa  130  3e-29  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.0882865  n/a   
 
 
-
 
NC_011729  PCC7424_0640  nitrate ABC transporter, inner membrane subunit  32.39 
 
 
279 aa  129  4.0000000000000003e-29  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_012912  Dd1591_1439  nitrate ABC transporter, inner membrane subunit  30.08 
 
 
310 aa  130  4.0000000000000003e-29  Dickeya zeae Ech1591  Bacteria  normal  0.062597  n/a   
 
 
-
 
NC_014150  Bmur_0153  binding-protein-dependent transport systems inner membrane component  33.33 
 
 
277 aa  129  5.0000000000000004e-29  Brachyspira murdochii DSM 12563  Bacteria  normal  0.589472  n/a   
 
 
-
 
NC_007778  RPB_2837  binding-protein dependent transport system inner membrane protein  36.73 
 
 
266 aa  129  5.0000000000000004e-29  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.115716  normal 
 
 
-
 
NC_009483  Gura_3875  binding-protein-dependent transport systems inner membrane component  33.06 
 
 
289 aa  129  6e-29  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_007973  Rmet_0276  nitrate transport permease  30.9 
 
 
303 aa  129  6e-29  Cupriavidus metallidurans CH34  Bacteria  normal  normal  0.21823 
 
 
-
 
NC_009485  BBta_2819  nitrate transport permease protein (nrtB)  29.06 
 
 
304 aa  129  6e-29  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.233469  normal 
 
 
-
 
NC_007298  Daro_2152  binding-protein dependent transport system inner membrane protein  37.23 
 
 
271 aa  129  7.000000000000001e-29  Dechloromonas aromatica RCB  Bacteria  normal  normal  0.529987 
 
 
-
 
NC_013421  Pecwa_1542  nitrate ABC transporter, inner membrane subunit  28.78 
 
 
304 aa  129  7.000000000000001e-29  Pectobacterium wasabiae WPP163  Bacteria  normal  0.244375  n/a   
 
 
-
 
NC_007413  Ava_1026  nitrate transport permease  30.34 
 
 
279 aa  129  8.000000000000001e-29  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.174596 
 
 
-
 
NC_007604  Synpcc7942_1489  nitrate transport permease  32.57 
 
 
278 aa  129  8.000000000000001e-29  Synechococcus elongatus PCC 7942  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_2935  binding-protein-dependent transport systems inner membrane component  35.16 
 
 
252 aa  129  8.000000000000001e-29  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_003295  RSc0380  putative nitrate transmembrane ABC transporter protein  30.2 
 
 
287 aa  128  1.0000000000000001e-28  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.931268 
 
 
-
 
NC_007947  Mfla_0326  nitrate transport permease  28.77 
 
 
295 aa  128  1.0000000000000001e-28  Methylobacillus flagellatus KT  Bacteria  normal  normal 
 
 
-
 
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