40 homologs were found in PanDaTox collection
for query gene Glov_1133 on replicon NC_010814
Organism: Geobacter lovleyi SZ



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_010814  Glov_1133  XRE family plasmid maintenance system antidote protein  100 
 
 
114 aa  237  4e-62  Geobacter lovleyi SZ  Bacteria  normal  0.96581  n/a   
 
 
-
 
NC_008609  Ppro_3124  XRE family transcriptional regulator  81.94 
 
 
76 aa  130  6e-30  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_2134  XRE family plasmid maintenance system antidote protein  55.26 
 
 
114 aa  124  3e-28  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0677285  n/a   
 
 
-
 
NC_009483  Gura_3435  XRE family transcriptional regulator  51.72 
 
 
116 aa  115  3e-25  Geobacter uraniireducens Rf4  Bacteria  normal  0.0322036  n/a   
 
 
-
 
NC_013173  Dbac_2140  transcriptional regulator, XRE family  50.85 
 
 
120 aa  107  7.000000000000001e-23  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_013224  Dret_2503  transcriptional regulator, XRE family  47.86 
 
 
117 aa  97.4  6e-20  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_008609  Ppro_1114  XRE family plasmid maintenance system antidote protein  50.41 
 
 
120 aa  94.4  4e-19  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_1891  transcriptional regulator, XRE family  47.01 
 
 
117 aa  92.8  1e-18  Desulfohalobium retbaense DSM 5692  Bacteria  decreased coverage  0.00988673  normal  0.0163804 
 
 
-
 
NC_013223  Dret_2363  transcriptional regulator, XRE family  46.15 
 
 
117 aa  90.9  5e-18  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_007484  Noc_0384  hypothetical protein  52.46 
 
 
126 aa  60.1  0.000000009  Nitrosococcus oceani ATCC 19707  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2570  transcriptional regulator, XRE family  41.56 
 
 
116 aa  50.4  0.000009  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_010831  Cphamn1_0557  transcriptional regulator, XRE family  40.3 
 
 
89 aa  48.9  0.00002  Chlorobium phaeobacteroides BS1  Bacteria  normal  normal  0.863729 
 
 
-
 
NC_011894  Mnod_0604  transcriptional regulator, XRE family  37.88 
 
 
138 aa  49.3  0.00002  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_2672  transcriptional regulator, XRE family  40.68 
 
 
118 aa  47.4  0.00006  Anaerocellum thermophilum DSM 6725  Bacteria  unclonable  0.0000000000679525  n/a   
 
 
-
 
NC_008340  Mlg_2561  XRE family transcriptional regulator  45.28 
 
 
86 aa  47.4  0.00007  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.333504  normal  0.0163697 
 
 
-
 
NC_011898  Ccel_3316  transcriptional regulator, XRE family  42.86 
 
 
60 aa  47  0.00009  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.000216063  n/a   
 
 
-
 
NC_013721  HMPREF0424_1165  toxin-antitoxin system, antitoxin component, Xre family  46.94 
 
 
94 aa  45.1  0.0003  Gardnerella vaginalis 409-05  Bacteria  n/a    decreased coverage  0.00000000604987 
 
 
-
 
NC_009485  BBta_6741  putative transcriptional regulator  46.81 
 
 
58 aa  43.9  0.0007  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.0202746  normal 
 
 
-
 
NC_009485  BBta_6629  putative Phage-related transcriptional regulator  35 
 
 
143 aa  42.7  0.002  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.275503 
 
 
-
 
NC_007777  Francci3_1136  XRE family transcriptional regulator  41.86 
 
 
282 aa  42.7  0.002  Frankia sp. CcI3  Bacteria  normal  0.113401  normal 
 
 
-
 
NC_009921  Franean1_5332  XRE family transcriptional regulator  41.86 
 
 
392 aa  42  0.002  Frankia sp. EAN1pec  Bacteria  normal  normal  0.0406632 
 
 
-
 
NC_009253  Dred_0888  XRE family transcriptional regulator  32.76 
 
 
67 aa  42.4  0.002  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_011004  Rpal_5273  anaerobic benzoate catabolism transcriptional regulator  37.74 
 
 
305 aa  42.4  0.002  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_009485  BBta_6641  anaerobic benzoate catabolism transcriptional regulator  34.33 
 
 
342 aa  42  0.003  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.451308  normal  0.130059 
 
 
-
 
NC_007484  Noc_0167  XRE family transcriptional regulator  39.62 
 
 
86 aa  41.6  0.004  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.101596  n/a   
 
 
-
 
NC_007952  Bxe_B1554  XRE family transcriptional regulator  36.07 
 
 
91 aa  41.2  0.004  Burkholderia xenovorans LB400  Bacteria  normal  0.902215  normal 
 
 
-
 
NC_008542  Bcen2424_0921  XRE family transcriptional regulator  30.67 
 
 
132 aa  41.2  0.004  Burkholderia cenocepacia HI2424  Bacteria  hitchhiker  0.0000830973  n/a   
 
 
-
 
NC_013946  Mrub_2575  XRE family transcriptional regulator  33.33 
 
 
230 aa  40.8  0.006  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.556687 
 
 
-
 
NC_011775  BCG9842_0009  HTH-type transcriptional regulator SinR  43.4 
 
 
60 aa  40.8  0.006  Bacillus cereus G9842  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_1816  XRE family transcriptional regulator  29.31 
 
 
191 aa  40.8  0.006  Serratia proteamaculans 568  Bacteria  hitchhiker  0.00473491  hitchhiker  0.000617218 
 
 
-
 
NC_009667  Oant_2458  XRE family transcriptional regulator  33.33 
 
 
72 aa  40.8  0.006  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  0.282719  n/a   
 
 
-
 
NC_009719  Plav_1812  XRE family transcriptional regulator  36.67 
 
 
72 aa  40.8  0.007  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.330526  normal 
 
 
-
 
NC_007492  Pfl01_3308  transcriptional regulator  33.96 
 
 
187 aa  40.4  0.007  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.38656  normal 
 
 
-
 
NC_009921  Franean1_5660  XRE family transcriptional regulator  33.9 
 
 
490 aa  40.4  0.008  Frankia sp. EAN1pec  Bacteria  normal  0.176576  normal  0.652733 
 
 
-
 
NC_007958  RPD_0877  anaerobic benzoate catabolism transcriptional regulator  36.84 
 
 
317 aa  40.4  0.008  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.54694  normal  0.67724 
 
 
-
 
NC_007604  Synpcc7942_0763  XRE family transcriptional regulator  34.92 
 
 
109 aa  40.4  0.008  Synechococcus elongatus PCC 7942  Bacteria  normal  0.042345  normal  0.213229 
 
 
-
 
NC_010717  PXO_03903  addiction module antidote protein, HigA family  45.28 
 
 
96 aa  40  0.01  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.433469  n/a   
 
 
-
 
NC_010511  M446_4071  XRE family transcriptional regulator  48.72 
 
 
123 aa  40  0.01  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_7321  transcriptional regulator, XRE family  36.73 
 
 
77 aa  40  0.01  Catenulispora acidiphila DSM 44928  Bacteria  hitchhiker  0.000062062  decreased coverage  0.00000000166173 
 
 
-
 
NC_008782  Ajs_1806  XRE family transcriptional regulator  37.29 
 
 
86 aa  40  0.01  Acidovorax sp. JS42  Bacteria  normal  0.579392  normal 
 
 
-
 
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