| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_5660 |
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| Symbol | |
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| ID | 5673987 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 6871812 |
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| End bp | 6873284 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641244514 |
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| Product | XRE family transcriptional regulator |
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| Protein accession | YP_001509917 |
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| Protein GI | 158317409 |
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| COG category | [K] Transcription |
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| COG ID | [COG1396] Predicted transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.176576 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.652733 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACTGGAC AAACCTGGCT GTGGACCCCA CCGCGACCGA CTCCAACAAG CGTTGGAATT
GGATCGCTGC TACGGGCGTA CCGGCAGGCC CATGGCCTGA CCCAGCAGCA ACTCGCCGAT
CTCCTCGGCT TCGACCAGTC CTATGTGTCG AAGGTCGAGA GCGGGCGGCG GGCGATCCAC
GACATCTCCA CGCTGCGCCA CATCGCGCGC AACCTCGGTC TGTCACCCGA GGACGTCGGA
CTCGCCCCGG GCGGTCTGGC CGACCGGCGT CGTGAGCCAC CGCGCGGCTC CGCGGTCGAG
AAGGTCGCCG GCAGCCAGCG CGCCTGGCGG CTGACCCGGG ACCACCTGAA CCACCACCGG
ATCAGCCTGG CCCGCGCCGC GGCCCGGCTC TACCCGGAGG CCTACCGTCT CGGCAACGGG
CTGCTGGCCC GTCCCGGCTG GGTGTGGGAC ACCCCGGTGG ACATCAACGA CATCGGCCTG
CGCTGGGAGC AGTCGGCGGG CGAGCCGGCG ATCACCGGCG CCGAGCCGGA GGCCGACGCC
ACCCGCCCGC TGGTCGGCGA CGGCGGCGCG CAGTCGCGTT ACCAGCGCTA CACCCGGGCG
ATGCGCGACC TCGACCGGCC GACCCTGTTC GAGAACCGGC TCAGCTTCCG GCTGCTGGAC
GTCGCCGAGG CCGAGGGTGC CCCCCCTACC CTCACCTTCG GCCACACCAC CTACTTCGAC
GCCGTCGACG TCTGCGAGAC CGTGGCGCAC GAGACCGCGG CGGCGATGAT GGGCGGCGAG
CTCGCCTGGC CCGCGCTGCC GTTCCGGCGC CGCATCGGCG ATCCGTTCGA CCTCGCCGGG
CGGGTCGCGC TGCCCTCCAT CAACACCCTG ACGATCCGGC TCGACCGGGG CAGCGCCAGC
TTCGTCCTGC ACCGGCGCAG CGCCGGCTCC GTGGCGACGG CGGGCGGGGT GTACCACGTG
CTGCCCGCGG GGGTGTTCCA GCCGTCCGGG ATCACCCCGT TCCACCACGA GGCCGACTTC
GACCTGTGGC GCAACGTCAT GCGCGAGCTC AGCGAGGAGC TGCTGGGTAA CGCCGAGCAC
GACGGCAGCT CGTCCCGGCC GATCGACTAC GACACCGACG AGCCGTTCCG CTCCTTCGAG
CAGGCGCGCC GCGCGGGCAC GCTGCGGGTC TTCTGCTTCG GCATGGGCCT CGACGCGCTC
ACCCTGTTCG GCGAGATCCT CACCGTCCTG GTCGTGGAGG CCGACACGTT CGACACGCTG
TTCGCCGACA TGGTCCGGAC GAACGCCGAG GGGTCGGTCG TCTCGACGGG GCCGGGCCGG
CAGGCGCACG AGGGGATCCC GTTCACCCAG GCCTCCCTGC GCCGGCTCGT CGACACCGAG
CCGCTCGCTC CCTCCGCCGC CGCCTGCCTG GAGCTCGCCT GGCGCCACCG GGAGACCCTC
CTGCCCGGGT TGCGCATGCG GGCATCGGTC TGA
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| Protein sequence | MTGQTWLWTP PRPTPTSVGI GSLLRAYRQA HGLTQQQLAD LLGFDQSYVS KVESGRRAIH
DISTLRHIAR NLGLSPEDVG LAPGGLADRR REPPRGSAVE KVAGSQRAWR LTRDHLNHHR
ISLARAAARL YPEAYRLGNG LLARPGWVWD TPVDINDIGL RWEQSAGEPA ITGAEPEADA
TRPLVGDGGA QSRYQRYTRA MRDLDRPTLF ENRLSFRLLD VAEAEGAPPT LTFGHTTYFD
AVDVCETVAH ETAAAMMGGE LAWPALPFRR RIGDPFDLAG RVALPSINTL TIRLDRGSAS
FVLHRRSAGS VATAGGVYHV LPAGVFQPSG ITPFHHEADF DLWRNVMREL SEELLGNAEH
DGSSSRPIDY DTDEPFRSFE QARRAGTLRV FCFGMGLDAL TLFGEILTVL VVEADTFDTL
FADMVRTNAE GSVVSTGPGR QAHEGIPFTQ ASLRRLVDTE PLAPSAAACL ELAWRHRETL
LPGLRMRASV
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