| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_1165 |
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| Symbol | |
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| ID | 8708923 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 1361793 |
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| End bp | 1362077 |
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| Gene Length | 285 bp |
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| Protein Length | 94 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646483255 |
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| Product | toxin-antitoxin system, antitoxin component, Xre family |
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| Protein accession | YP_003374363 |
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| Protein GI | 283783609 |
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| COG category | [K] Transcription |
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| COG ID | [COG3620] Predicted transcriptional regulator with C-terminal CBS domains |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.00000000604987 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAATGATT TGCATGAACT CACGGACGAG CTTATGAAGG ATCCCGAGTT CAAGAAAGAG
TATGATGCGC TTCAGCCGGA AAGAGACTTG ACTATGTCGC TTGTGATGGC GAGAAAAAGG
GCTGGTTTGA CTCAGGCTGA GCTGTCGGAG AAGACGGGTA TAAGTCAGTC GGATATTAGC
AGGTTGGAAA ATGGTTCGAG GAATCCGACT ATTGCGCTTT TGAATCGTAT TGCAAATGCT
TTGAATGCGA CTTGCAGGAT TGAGTTTGTG CCGAATGCGC GTTGA
|
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| Protein sequence | MNDLHELTDE LMKDPEFKKE YDALQPERDL TMSLVMARKR AGLTQAELSE KTGISQSDIS
RLENGSRNPT IALLNRIANA LNATCRIEFV PNAR
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