| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_5273 |
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| Symbol | |
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| ID | 6412974 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 5687181 |
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| End bp | 5688098 |
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| Gene Length | 918 bp |
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| Protein Length | 305 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642715163 |
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| Product | anaerobic benzoate catabolism transcriptional regulator |
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| Protein accession | YP_001994235 |
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| Protein GI | 192293630 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0703] Shikimate kinase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGAGC CAGACGATAC CGACGCGAGC TTTCTGCTCG ACCTCGGCCG CCATGTCCGC
ACCATGCGCG GGCGGCGCGG CATGTCGCGC AAGGTGCTGG CCAAGGTCTC CGGCATCTCG
GAGCGCTACA TCGCCCAGCT CGAAAGCGGC AAAGGCAACG TATCGATCAT GCTGCTGCGC
CGGATCTCCG AAGCGCTGGC GACGCCGCTC GAAGACCTGC TGCCGTCCAA TGAATCTTCG
GCCGACTGGC CGGTGATCCG TGATCTGGTG CGGCGCGCCA CCCCTGTGCA GATCGCGCAT
GCCAAGGACG TCTTGTCCGG CCTCGGCCGC TACGGCGGCA GCCTGGAGCG GGAGGCGACC
TTCCATGGCA TCGCGCTGAT CGGCCTGCGC GGCGCCGGCA AGTCGACGCT CGGCAAGATG
CTGGCCGACA GCATCGGCTG GAGCTTCGTC GAACTGAATC GCGAAATCGA ACGCCAGAAC
GGCCTGTCGG TGTCCGAGAT CATCGCGCTG TACGGTCAGG AAGGCTTCCG CCGCATGGAG
CAGACCGCGC TTTCACGGCT GCTCGCCCGC AAGGAGCCGA TCGTGCTGGC GACCGGCGGC
GGCATCGTCT CCGAGCCGAT CACCTTCGAT CAGATCCTGA CCTCGTTCTA CACGATCTGG
CTGAAGGCCG AGCCGGAGGA GCACATGGCG CGGGTCCGCG GCCAGGGAGA CCTGCGGCCG
ATGGCCGACG ACCGCGCCGC GATGCAGGAG CTGCGCACCA TCCTGCAAAG CCGCGAGCCA
CTGTATGCCC GCGCCGCCGG CGTACTCGAC ACCGCCGGGC TGTCGGTCGA AGCCGCCGCG
CAGAAGCTGG TTGCGATGGT GTCGCCGGTG CTGAGCCGCG ATGCAGGCGC GTTCGGCCTG
CGCGAGGCCA CGCCGTAA
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| Protein sequence | MAEPDDTDAS FLLDLGRHVR TMRGRRGMSR KVLAKVSGIS ERYIAQLESG KGNVSIMLLR
RISEALATPL EDLLPSNESS ADWPVIRDLV RRATPVQIAH AKDVLSGLGR YGGSLEREAT
FHGIALIGLR GAGKSTLGKM LADSIGWSFV ELNREIERQN GLSVSEIIAL YGQEGFRRME
QTALSRLLAR KEPIVLATGG GIVSEPITFD QILTSFYTIW LKAEPEEHMA RVRGQGDLRP
MADDRAAMQE LRTILQSREP LYARAAGVLD TAGLSVEAAA QKLVAMVSPV LSRDAGAFGL
REATP
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