23 homologs were found in PanDaTox collection
for query gene Gura_3435 on replicon NC_009483
Organism: Geobacter uraniireducens Rf4



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009483  Gura_3435  XRE family transcriptional regulator  100 
 
 		 116 aa  236  5.999999999999999e-62  Geobacter uraniireducens Rf4  Bacteria  normal  0.0322036  n/a   
 
 
-
 
NC_008609  Ppro_2134  XRE family plasmid maintenance system antidote protein  62.93 
 
 		 114 aa  149  1e-35  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0677285  n/a   
 
 
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NC_010814  Glov_1133  XRE family plasmid maintenance system antidote protein  51.72 
 
 		 114 aa  115  3e-25  Geobacter lovleyi SZ  Bacteria  normal  0.96581  n/a   
 
 
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NC_008609  Ppro_1114  XRE family plasmid maintenance system antidote protein  47.15 
 
 		 120 aa  92.8  1e-18  Pelobacter propionicus DSM 2379  Bacteria  normal  1  n/a   
 
 
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NC_013173  Dbac_2140  transcriptional regulator, XRE family  45.76 
 
 		 120 aa  84.3  5e-16  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  1  n/a   
 
 
-
 
NC_013223  Dret_1891  transcriptional regulator, XRE family  42.28 
 
 		 117 aa  81.6  0.000000000000003  Desulfohalobium retbaense DSM 5692  Bacteria  decreased coverage  0.00988673  normal  0.0163804 
 
 
-
 
NC_013224  Dret_2503  transcriptional regulator, XRE family  38.21 
 
 		 117 aa  76.3  0.0000000000001  Desulfohalobium retbaense DSM 5692  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008609  Ppro_3124  XRE family transcriptional regulator  53.73 
 
 		 76 aa  69.7  0.00000000001  Pelobacter propionicus DSM 2379  Bacteria  normal  1  n/a   
 
 
-
 
NC_013223  Dret_2363  transcriptional regulator, XRE family  37.5 
 
 		 117 aa  65.5  0.0000000002  Desulfohalobium retbaense DSM 5692  Bacteria  normal  1  normal  1 
 
 
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NC_007484  Noc_0384  hypothetical protein  48.48 
 
 		 126 aa  55.8  0.0000002  Nitrosococcus oceani ATCC 19707  Bacteria  normal  1  n/a   
 
 
-
 
NC_013173  Dbac_2570  transcriptional regulator, XRE family  42.11 
 
 		 116 aa  54.7  0.0000005  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  1  n/a   
 
 
-
 
NC_008340  Mlg_2561  XRE family transcriptional regulator  43.4 
 
 		 86 aa  45.8  0.0002  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.333504  normal  0.0163697 
 
 
-
 
NC_007484  Noc_0167  XRE family transcriptional regulator  41.51 
 
 		 86 aa  44.7  0.0004  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.101596  n/a   
 
 
-
 
NC_010831  Cphamn1_0557  transcriptional regulator, XRE family  34.25 
 
 		 89 aa  43.9  0.0007  Chlorobium phaeobacteroides BS1  Bacteria  normal  1  normal  0.863729 
 
 
-
 
NC_008148  Rxyl_0162  XRE family transcriptional regulator  44.23 
 
 		 77 aa  43.5  0.001  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_008261  CPF_1021  DNA-binding protein  35.59 
 
 		 180 aa  42.7  0.002  Clostridium perfringens ATCC 13124  Bacteria  hitchhiker  0.00000053147  n/a   
 
 
-
 
NC_013946  Mrub_2575  XRE family transcriptional regulator  37.25 
 
 		 230 aa  42  0.003  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  0.556687 
 
 
-
 
NC_002967  TDE1305  DNA-binding protein  37.5 
 
 		 72 aa  41.2  0.005  Treponema denticola ATCC 35405  Bacteria  normal  1  n/a   
 
 
-
 
NC_009012  Cthe_2461  XRE family transcriptional regulator  42.55 
 
 		 79 aa  40.8  0.006  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.00000100603  n/a   
 
 
-
 
NC_011989  Avi_0012  transcriptional regulator  46.15 
 
 		 131 aa  40.8  0.007  Agrobacterium vitis S4  Bacteria  normal  0.388282  n/a   
 
 
-
 
NC_012034  Athe_2434  transcriptional regulator, XRE family  35.59 
 
 		 77 aa  40.4  0.008  Anaerocellum thermophilum DSM 6725  Bacteria  normal  1  n/a   
 
 
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NC_012034  Athe_2672  transcriptional regulator, XRE family  35.59 
 
 		 118 aa  40.4  0.008  Anaerocellum thermophilum DSM 6725  Bacteria  unclonable  0.0000000000679525  n/a   
 
 
-
 
NC_013165  Shel_02750  predicted transcriptional regulator  40.98 
 
 		 215 aa  40.4  0.008  Slackia heliotrinireducens DSM 20476  Bacteria  normal  1  normal  1 
 
 
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