25 homologs were found in PanDaTox collection
for query gene Dbac_2140 on replicon NC_013173
Organism: Desulfomicrobium baculatum DSM 4028



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013173  Dbac_2140  transcriptional regulator, XRE family  100 
 
 		 120 aa  243  4e-64  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  1  n/a   
 
 
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NC_010814  Glov_1133  XRE family plasmid maintenance system antidote protein  50.85 
 
 		 114 aa  107  7.000000000000001e-23  Geobacter lovleyi SZ  Bacteria  normal  0.96581  n/a   
 
 
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NC_013223  Dret_2363  transcriptional regulator, XRE family  44.54 
 
 		 117 aa  97.1  7e-20  Desulfohalobium retbaense DSM 5692  Bacteria  normal  1  normal  1 
 
 
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NC_013224  Dret_2503  transcriptional regulator, XRE family  44.54 
 
 		 117 aa  94  7e-19  Desulfohalobium retbaense DSM 5692  Bacteria  normal  1  normal  1 
 
 
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NC_013223  Dret_1891  transcriptional regulator, XRE family  42.86 
 
 		 117 aa  90.5  7e-18  Desulfohalobium retbaense DSM 5692  Bacteria  decreased coverage  0.00988673  normal  0.0163804 
 
 
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NC_008609  Ppro_3124  XRE family transcriptional regulator  60 
 
 		 76 aa  84.7  4e-16  Pelobacter propionicus DSM 2379  Bacteria  normal  1  n/a   
 
 
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NC_009483  Gura_3435  XRE family transcriptional regulator  45.76 
 
 		 116 aa  84.3  6e-16  Geobacter uraniireducens Rf4  Bacteria  normal  0.0322036  n/a   
 
 
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NC_008609  Ppro_2134  XRE family plasmid maintenance system antidote protein  66.1 
 
 		 114 aa  79.3  0.00000000000001  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0677285  n/a   
 
 
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NC_008609  Ppro_1114  XRE family plasmid maintenance system antidote protein  62.12 
 
 		 120 aa  79.3  0.00000000000002  Pelobacter propionicus DSM 2379  Bacteria  normal  1  n/a   
 
 
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NC_013173  Dbac_2570  transcriptional regulator, XRE family  43.9 
 
 		 116 aa  62  0.000000003  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  1  n/a   
 
 
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NC_007484  Noc_0384  hypothetical protein  43.28 
 
 		 126 aa  53.1  0.000001  Nitrosococcus oceani ATCC 19707  Bacteria  normal  1  n/a   
 
 
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NC_010831  Cphamn1_0557  transcriptional regulator, XRE family  36 
 
 		 89 aa  43.9  0.0007  Chlorobium phaeobacteroides BS1  Bacteria  normal  1  normal  0.863729 
 
 
-
 
NC_009483  Gura_4120  XRE family transcriptional regulator  39.44 
 
 		 305 aa  42.4  0.002  Geobacter uraniireducens Rf4  Bacteria  unclonable  0.00000000066786  n/a   
 
 
-
 
NC_013946  Mrub_2575  XRE family transcriptional regulator  37.74 
 
 		 230 aa  42.4  0.002  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  0.556687 
 
 
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NC_008782  Ajs_3590  XRE family transcriptional regulator  40.98 
 
 		 79 aa  42.7  0.002  Acidovorax sp. JS42  Bacteria  normal  0.334421  normal  0.665085 
 
 
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NC_002967  TDE1305  DNA-binding protein  33.85 
 
 		 72 aa  42  0.003  Treponema denticola ATCC 35405  Bacteria  normal  1  n/a   
 
 
-
 
NC_011004  Rpal_2644  transcriptional regulator, XRE family  37.93 
 
 		 474 aa  42  0.003  Rhodopseudomonas palustris TIE-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007347  Reut_A0999  helix-hairpin-helix DNA-binding motif-containing protein  40 
 
 		 129 aa  42  0.003  Ralstonia eutropha JMP134  Bacteria  normal  1  n/a   
 
 
-
 
NC_011662  Tmz1t_2134  transcriptional regulator, XRE family  39.34 
 
 		 85 aa  40.8  0.006  Thauera sp. MZ1T  Bacteria  normal  0.123571  n/a   
 
 
-
 
NC_008148  Rxyl_0162  XRE family transcriptional regulator  44.9 
 
 		 77 aa  40.8  0.006  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
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NC_011898  Ccel_3316  transcriptional regulator, XRE family  43.1 
 
 		 60 aa  40.8  0.007  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.000216063  n/a   
 
 
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NC_008687  Pden_4472  hypothetical protein  38.89 
 
 		 464 aa  40.8  0.007  Paracoccus denitrificans PD1222  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007777  Francci3_0889  XRE family transcriptional regulator  41.67 
 
 		 81 aa  40.4  0.008  Frankia sp. CcI3  Bacteria  normal  1  normal  1 
 
 
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NC_008042  TM1040_3842  XRE family transcriptional regulator  36.67 
 
 		 100 aa  40.4  0.009  Ruegeria sp. TM1040  Bacteria  normal  1  normal  0.039108 
 
 
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NC_013421  Pecwa_0455  transcriptional regulator, XRE family  37.04 
 
 		 78 aa  40  0.01  Pectobacterium wasabiae WPP163  Bacteria  normal  0.181853  n/a   
 
 
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