Gene Francci3_0889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFrancci3_0889 
Symbol 
ID3905146 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. CcI3 
KingdomBacteria 
Replicon accessionNC_007777 
Strand
Start bp1032806 
End bp1033051 
Gene Length246 bp 
Protein Length81 aa 
Translation table11 
GC content65% 
IMG OID637878222 
ProductXRE family transcriptional regulator 
Protein accessionYP_480002 
Protein GI86739602 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACCC CACCACTCTC AACGGCTGCG CAGACGTTCG GCGAACGGGT GCGTGCCCAG 
CGGCACGAGC TGGGCCTGAG CCAGGAGCAA CTGGCCGACG AGTGCGGCTT GCACTGGACG
TTCGTTGGCC AGGTGGAGCG GGGCCGGCGG AACATCAGCT TGCACAACAT CCTCAAGTTG
GCTGACGCGC TGAAGATCGA TCCTGCGGAG TTGGTGCGTG GGTTGCAGGC GCCATCCAAC
GAGTAG
 
Protein sequence
MATPPLSTAA QTFGERVRAQ RHELGLSQEQ LADECGLHWT FVGQVERGRR NISLHNILKL 
ADALKIDPAE LVRGLQAPSN E