Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_3842 |
Symbol | |
ID | 4074905 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008042 |
Strand | + |
Start bp | 90028 |
End bp | 90330 |
Gene Length | 303 bp |
Protein Length | 100 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638004499 |
Product | XRE family transcriptional regulator |
Protein accession | YP_611234 |
Protein GI | 99077975 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 54 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.039108 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTCTAA AACAAGGCAT CCACACCTCT GATGCTGCGC GCGACGCCCG ATCAGATATG GGGCTTTGGT TGAAGTCGTT GCGAGAACAA CAAGGGATGT CCCAGAGGGA TCTGGCGAAT GCGCTAAATC TCGATTATTA CACCTTCATC TCTCAATTGG AGAATGGACG CGGCCGCATC CCACCAGCGA GATATCGTGA TTGGGCGGCG GCGTTGCAGG TGGAGCCTAA GAGCTTCGTG AAGAAGCTTC TGTCTTATAA TGAGCCCCTT ACATACGAAA TTTTGTTTGG TGATGCTGTC TAA
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Protein sequence | MLLKQGIHTS DAARDARSDM GLWLKSLREQ QGMSQRDLAN ALNLDYYTFI SQLENGRGRI PPARYRDWAA ALQVEPKSFV KKLLSYNEPL TYEILFGDAV
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