28 homologs were found in PanDaTox collection
for query gene Ppro_3124 on replicon NC_008609
Organism: Pelobacter propionicus DSM 2379



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008609  Ppro_3124  XRE family transcriptional regulator  100 
 
 		 76 aa  157  4e-38  Pelobacter propionicus DSM 2379  Bacteria  normal  1  n/a   
 
 
-
 
NC_010814  Glov_1133  XRE family plasmid maintenance system antidote protein  81.94 
 
 		 114 aa  130  6e-30  Geobacter lovleyi SZ  Bacteria  normal  0.96581  n/a   
 
 
-
 
NC_008609  Ppro_2134  XRE family plasmid maintenance system antidote protein  68.57 
 
 		 114 aa  93.2  1e-18  Pelobacter propionicus DSM 2379  Bacteria  normal  0.0677285  n/a   
 
 
-
 
NC_013223  Dret_1891  transcriptional regulator, XRE family  58.11 
 
 		 117 aa  85.9  2e-16  Desulfohalobium retbaense DSM 5692  Bacteria  decreased coverage  0.00988673  normal  0.0163804 
 
 
-
 
NC_013173  Dbac_2140  transcriptional regulator, XRE family  60 
 
 		 120 aa  84.7  4e-16  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  1  n/a   
 
 
-
 
NC_008609  Ppro_1114  XRE family plasmid maintenance system antidote protein  65.15 
 
 		 120 aa  79.7  0.00000000000001  Pelobacter propionicus DSM 2379  Bacteria  normal  1  n/a   
 
 
-
 
NC_013224  Dret_2503  transcriptional regulator, XRE family  54.79 
 
 		 117 aa  76.3  0.0000000000001  Desulfohalobium retbaense DSM 5692  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013223  Dret_2363  transcriptional regulator, XRE family  53.42 
 
 		 117 aa  76.3  0.0000000000001  Desulfohalobium retbaense DSM 5692  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009483  Gura_3435  XRE family transcriptional regulator  53.73 
 
 		 116 aa  69.7  0.00000000001  Geobacter uraniireducens Rf4  Bacteria  normal  0.0322036  n/a   
 
 
-
 
NC_007484  Noc_0384  hypothetical protein  54.1 
 
 		 126 aa  55.5  0.0000003  Nitrosococcus oceani ATCC 19707  Bacteria  normal  1  n/a   
 
 
-
 
NC_013173  Dbac_2570  transcriptional regulator, XRE family  44.62 
 
 		 116 aa  48.5  0.00003  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  1  n/a   
 
 
-
 
NC_010831  Cphamn1_0557  transcriptional regulator, XRE family  38.33 
 
 		 89 aa  46.6  0.0001  Chlorobium phaeobacteroides BS1  Bacteria  normal  1  normal  0.863729 
 
 
-
 
NC_011898  Ccel_3316  transcriptional regulator, XRE family  44.64 
 
 		 60 aa  45.8  0.0002  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.000216063  n/a   
 
 
-
 
NC_011894  Mnod_0604  transcriptional regulator, XRE family  45.1 
 
 		 138 aa  45.4  0.0003  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_009485  BBta_6629  putative Phage-related transcriptional regulator  43.4 
 
 		 143 aa  44.3  0.0005  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  0.275503 
 
 
-
 
NC_013721  HMPREF0424_1165  toxin-antitoxin system, antitoxin component, Xre family  43.4 
 
 		 94 aa  44.3  0.0006  Gardnerella vaginalis 409-05  Bacteria  n/a    decreased coverage  0.00000000604987 
 
 
-
 
NC_009832  Spro_1816  XRE family transcriptional regulator  37.5 
 
 		 191 aa  42.7  0.002  Serratia proteamaculans 568  Bacteria  hitchhiker  0.00473491  hitchhiker  0.000617218 
 
 
-
 
NC_011894  Mnod_6981  transcriptional regulator, XRE family  41.67 
 
 		 245 aa  42.4  0.002  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_007777  Francci3_1136  XRE family transcriptional regulator  41.46 
 
 		 282 aa  42.7  0.002  Frankia sp. CcI3  Bacteria  normal  0.113401  normal  1 
 
 
-
 
NC_009921  Franean1_5660  XRE family transcriptional regulator  38.46 
 
 		 490 aa  41.6  0.003  Frankia sp. EAN1pec  Bacteria  normal  0.176576  normal  0.652733 
 
 
-
 
NC_009921  Franean1_5332  XRE family transcriptional regulator  41.46 
 
 		 392 aa  42  0.003  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.0406632 
 
 
-
 
NC_009719  Plav_1812  XRE family transcriptional regulator  44.23 
 
 		 72 aa  41.6  0.004  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.330526  normal  1 
 
 
-
 
NC_007644  Moth_0364  XRE family transcriptional regulator  35.37 
 
 		 100 aa  41.2  0.004  Moorella thermoacetica ATCC 39073  Bacteria  hitchhiker  0.000000740846  normal  1 
 
 
-
 
NC_008340  Mlg_2561  XRE family transcriptional regulator  47.83 
 
 		 86 aa  41.2  0.005  Alkalilimnicola ehrlichii MLHE-1  Bacteria  normal  0.333504  normal  0.0163697 
 
 
-
 
NC_013131  Caci_7321  transcriptional regulator, XRE family  40.82 
 
 		 77 aa  40.8  0.006  Catenulispora acidiphila DSM 44928  Bacteria  hitchhiker  0.000062062  decreased coverage  0.00000000166173 
 
 
-
 
NC_007794  Saro_3015  putative prophage repressor  44.64 
 
 		 227 aa  40.8  0.007  Novosphingobium aromaticivorans DSM 12444  Bacteria  normal  1  n/a   
 
 
-
 
NC_002967  TDE1305  DNA-binding protein  43.14 
 
 		 72 aa  40.4  0.008  Treponema denticola ATCC 35405  Bacteria  normal  1  n/a   
 
 
-
 
NC_007777  Francci3_0858  XRE family transcriptional regulator  38.46 
 
 		 497 aa  40.4  0.009  Frankia sp. CcI3  Bacteria  normal  0.359757  normal  1 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>