Gene Cphamn1_0557 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0557 
Symbol 
ID6374221 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp590965 
End bp591234 
Gene Length270 bp 
Protein Length89 aa 
Translation table11 
GC content49% 
IMG OID642683073 
Producttranscriptional regulator, XRE family 
Protein accessionYP_001959000 
Protein GI189499530 
COG category[K] Transcription 
COG ID[COG1813] Predicted transcription factor, homolog of eukaryotic MBF1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.863729 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCTCA TTGAAAGCAC GAGCTTCTGG AAGGAAATGG AACGGAACCG CATTGGCAAC 
CTGCTTTCCG GTGCGCGTTT GAAGGCCGGG TTGACCCAGA CTGAGCTTGC AAAGAGGCTG
GGTGTTCGCC AGAACATGAT CAGTGATTAT GAAAACGGCA GACGCACCTA TTCGGATGAG
ATGGCAGGTC GACTGAGCAA AGTGCTCAAG GTCAAGGAAG AAAGGTTGAA ATACGGAAGA
AAACATCAAG GTACAGACAA TTCTGAATAG
 
Protein sequence
MILIESTSFW KEMERNRIGN LLSGARLKAG LTQTELAKRL GVRQNMISDY ENGRRTYSDE 
MAGRLSKVLK VKEERLKYGR KHQGTDNSE