Gene CPF_1021 details

Gene Information

• Locus tag: CPF_1021
• ID: 4201964
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens ATCC 13124
• Kingdom: Bacteria
• Replicon accession: NC_008261
• Strand: -
• Start bp: 1172854
• End bp: 1173396
• Gene Length: 543 bp
• Protein Length: 180 aa
• Translation table: 11
• GC content: 29%
• IMG OID: 638081902
• Product: DNA-binding protein
• Protein accession: YP_695467
• Protein GI: 110800489

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.00000053147
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTTTATTG GTTATAGGCT ACAAAAATTG CGAAAGAAAA GAAAATTAAC TCAAAAGGCT 
TTAGCTGAAA TGACAGGTAT ATCTCGTTCT TATCTCTCAG ATATAGAACA TAACAGGTAT 
AACCCTAGCT TTGATACTAT TGAGGCATTA GCCACATCTC TAAAGCTTGA TTTAAAATCA 
TTTTTTGATG ATACTCTCTT AGAAGAAGAT TATTATTTAA AACCTCTAAA TGAAGAGCTA 
GAAGATGAAA GATTTGAAGA AATTGAGGAG CTTTCTGAAA ATGAAATTAT TGAAAAGCAA 
ATAATTAACA ATGATTTGAA TACTTCTTAT AAAACTAGCT CCCTTTCAAA AAAGGAAACC 
TTAAATATTA AAGCAGATTT AGAGAAAACT CTAAATAACT TAGATAATTT TGAAAAGAAT 
ATAGCCTTTG AGGGGTTCCT CTTAGATGGT GAAACAAGAA AAGCTTTTAA GGAAAGCTTA 
GAACATTCAA TGAAAATGGC AAAACTAATT GCCAAAAACA AATTTTCTTC TAAAGCAAAT 
TAG 

 

Protein sequence

MFIGYRLQKL RKKRKLTQKA LAEMTGISRS YLSDIEHNRY NPSFDTIEAL ATSLKLDLKS 
FFDDTLLEED YYLKPLNEEL EDERFEEIEE LSENEIIEKQ IINNDLNTSY KTSSLSKKET 
LNIKADLEKT LNNLDNFEKN IAFEGFLLDG ETRKAFKESL EHSMKMAKLI AKNKFSSKAN