| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | RPD_0877 |
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| Symbol | |
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| ID | 4021351 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris BisB5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007958 |
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| Strand | - |
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| Start bp | 987359 |
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| End bp | 988312 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637961067 |
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| Product | anaerobic benzoate catabolism transcriptional regulator |
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| Protein accession | YP_568016 |
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| Protein GI | 91975357 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0703] Shikimate kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.54694 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.67724 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCCGC ACGACATCAT GAGCGCCCTT TTGGAAATGA CAGAATCTGC CGAATCCGAT
GCCGGCTTCC TGCTGGAGCT GGGGCAGCGC GTCCGTACGC TGCGCGGACT GCGCGGCATG
TCGCGCAAGG TGCTGGCGAA AGTGTCGGGG ATTTCCGAAC GCTATATCGC GCAGCTCGAG
AGCGGCAAAG GCAACGTCTC GATTATCCTG CTGCGCCGGG TGTCCGACGC GCTCGCGACG
CCGCTGGAGG ATCTGCTCCC CAACAGCGAC CCGTCGATCG ACTGGCCGGT GATCCGCGAT
CTGGTCCGCC GCGCCACGCC GGTGCAGATC GCACATGCCA AGGACGTGCT GTCCGGCATG
GGCCGGCTCG GCGCCGGCGC GCGGCGCGCC CAGGCGCTGC ACGGCATCGC GCTGATCGGG
CTGCGCGGCG CCGGCAAGTC GACGCTCGGG CGAATGCTCG CCGACAAGAT CGGCTGGTCG
TTCGTCGAGC TGAACAAGGA AATCGAGCAG CAGAACGGCC TGTCGGTCGC CGAGATCATC
GCGCTGTACG GCCAGGAAGG TTTCCGCCGG ATGGAGCAGG CGGCGCTGAC GCAATTGCTG
GCGCGCAAGG AACTGATGGT GCTGGCGACC GGCGGCGGCA TCGTCTCCGA GGCGATCAGC
TTCGATCAGA TCCTGTCGTC GTTCTACACG ATTTGGCTGA AGGCCGACCC CGAGGAGCAT
ATGGCGCGGG TGCGCGGCCA GGGCGATCTG CGGCCGATGG CCGACGATCG CGCCGCGATG
CAGGAGCTGC GCACCATCCT GCAGAGCCGC GAACCGCTCT ACGCCCGCGC CTCCGGCGTG
CTCGACACCG CGGGGCTGAG CGTCGACGAG GCCGCGGCGA AACTGACCGC GATGGTCTCG
CCGGTGCTGT GCCGCGACGC CTGCGCGTTC GGGCTGAAGA ACGCGGCGGT TTAG
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| Protein sequence | MIPHDIMSAL LEMTESAESD AGFLLELGQR VRTLRGLRGM SRKVLAKVSG ISERYIAQLE
SGKGNVSIIL LRRVSDALAT PLEDLLPNSD PSIDWPVIRD LVRRATPVQI AHAKDVLSGM
GRLGAGARRA QALHGIALIG LRGAGKSTLG RMLADKIGWS FVELNKEIEQ QNGLSVAEII
ALYGQEGFRR MEQAALTQLL ARKELMVLAT GGGIVSEAIS FDQILSSFYT IWLKADPEEH
MARVRGQGDL RPMADDRAAM QELRTILQSR EPLYARASGV LDTAGLSVDE AAAKLTAMVS
PVLCRDACAF GLKNAAV
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