Gene Synpcc7942_0763 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_0763 
Symbol 
ID3775939 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp756989 
End bp757318 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content51% 
IMG OID637799178 
ProductXRE family transcriptional regulator 
Protein accessionYP_399782 
Protein GI81299574 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.042345 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.213229 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCGACCC CGCCGAAAAA CCCTCCCAGC CTGCGTTTTC CGTTTCTATT TCTGTTAGTA 
AATACCCTTA TGAAAAATTA CGCTGTGCCA AACATTGCGG CGCTTAGGAA GCGCACTGGG
CTGAGCCAAA CGCAGCTGGC TAACATCGTT GGCGTTGACC CTGTGACAAT CCGCAACTGG
GAAAGAGGGC GATCGGGCCT TGACTGGTTT GTGAAGCTCG CCAAGTTGTG CGAAGCACTT
GACTGCTCTC CTCGTGACTT AGTCAAGGAT CCGGACAGTG AATCAAAAAA GGTGCCACAG
ACAGTTAATG AGCTTTTTGC AAGCTTCTAA
 
Protein sequence
MATPPKNPPS LRFPFLFLLV NTLMKNYAVP NIAALRKRTG LSQTQLANIV GVDPVTIRNW 
ERGRSGLDWF VKLAKLCEAL DCSPRDLVKD PDSESKKVPQ TVNELFASF