Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_0763 |
Symbol | |
ID | 3775939 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | - |
Start bp | 756989 |
End bp | 757318 |
Gene Length | 330 bp |
Protein Length | 109 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637799178 |
Product | XRE family transcriptional regulator |
Protein accession | YP_399782 |
Protein GI | 81299574 |
COG category | [K] Transcription |
COG ID | [COG1396] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.042345 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.213229 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCGACCC CGCCGAAAAA CCCTCCCAGC CTGCGTTTTC CGTTTCTATT TCTGTTAGTA AATACCCTTA TGAAAAATTA CGCTGTGCCA AACATTGCGG CGCTTAGGAA GCGCACTGGG CTGAGCCAAA CGCAGCTGGC TAACATCGTT GGCGTTGACC CTGTGACAAT CCGCAACTGG GAAAGAGGGC GATCGGGCCT TGACTGGTTT GTGAAGCTCG CCAAGTTGTG CGAAGCACTT GACTGCTCTC CTCGTGACTT AGTCAAGGAT CCGGACAGTG AATCAAAAAA GGTGCCACAG ACAGTTAATG AGCTTTTTGC AAGCTTCTAA
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Protein sequence | MATPPKNPPS LRFPFLFLLV NTLMKNYAVP NIAALRKRTG LSQTQLANIV GVDPVTIRNW ERGRSGLDWF VKLAKLCEAL DCSPRDLVKD PDSESKKVPQ TVNELFASF
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