More than 300 homologs were found in PanDaTox collection
for query gene Dole_2126 on replicon NC_009943
Organism: Desulfococcus oleovorans Hxd3



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009943  Dole_2126  response regulator receiver protein  100 
 
 
139 aa  281  1.0000000000000001e-75  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_1802  response regulator receiver protein  34.4 
 
 
158 aa  82  0.000000000000003  Haliangium ochraceum DSM 14365  Bacteria  normal  0.16578  normal 
 
 
-
 
NC_013440  Hoch_2281  response regulator receiver protein  37.9 
 
 
128 aa  80.9  0.000000000000005  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.498531 
 
 
-
 
NC_013525  Tter_0790  two component, sigma54 specific, transcriptional regulator, Fis family  42.24 
 
 
466 aa  79.7  0.00000000000001  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_010814  Glov_2942  two component, sigma54 specific, transcriptional regulator, Fis family  37.84 
 
 
451 aa  77  0.00000000000007  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU0470  sigma-54 dependent response regulator  39.83 
 
 
453 aa  76.6  0.0000000000001  Geobacter sulfurreducens PCA  Bacteria  normal  0.253212  n/a   
 
 
-
 
NC_013173  Dbac_1382  histidine kinase  33.33 
 
 
912 aa  73.2  0.000000000001  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_2396  response regulator receiver protein  32.2 
 
 
126 aa  70.9  0.000000000005  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.612966  normal  0.464694 
 
 
-
 
NC_007643  Rru_A1282  two component transcriptional regulator  32.56 
 
 
249 aa  70.5  0.000000000006  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  n/a   
 
 
-
 
NC_013223  Dret_0887  response regulator receiver modulated metal dependent phosphohydrolase  30.53 
 
 
496 aa  70.5  0.000000000006  Desulfohalobium retbaense DSM 5692  Bacteria  normal  0.384329  normal 
 
 
-
 
NC_007517  Gmet_3263  two component, sigma54 specific, Fis family transcriptional regulator  33.33 
 
 
464 aa  70.5  0.000000000008  Geobacter metallireducens GS-15  Bacteria  normal  hitchhiker  0.00000000257125 
 
 
-
 
NC_009972  Haur_2262  two component transcriptional regulator  33.07 
 
 
231 aa  69.7  0.00000000001  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_011666  Msil_2780  histidine kinase  34.88 
 
 
558 aa  69.3  0.00000000001  Methylocella silvestris BL2  Bacteria  n/a    normal 
 
 
-
 
NC_009483  Gura_3572  two component, sigma-54 specific, Fis family transcriptional regulator  34.48 
 
 
457 aa  68.9  0.00000000002  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B2610  histidine kinase  37.07 
 
 
552 aa  68.9  0.00000000002  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_010655  Amuc_1728  two component transcriptional regulator, winged helix family  30.95 
 
 
234 aa  68.9  0.00000000002  Akkermansia muciniphila ATCC BAA-835  Bacteria  normal  0.541096  normal 
 
 
-
 
NC_010814  Glov_3076  two component, sigma54 specific, transcriptional regulator, Fis family  33.06 
 
 
454 aa  68.6  0.00000000003  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_003910  CPS_1500  flagellar regulatory protein C  34.62 
 
 
446 aa  68.2  0.00000000003  Colwellia psychrerythraea 34H  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_4152  two component, sigma54 specific, Fis family transcriptional regulator  32.8 
 
 
480 aa  68.6  0.00000000003  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.038607 
 
 
-
 
NC_009483  Gura_2018  two component, sigma-54 specific, Fis family transcriptional regulator  36.44 
 
 
447 aa  68.6  0.00000000003  Geobacter uraniireducens Rf4  Bacteria  normal  0.110893  n/a   
 
 
-
 
NC_010513  Xfasm12_1119  response regulator receiver protein  36.8 
 
 
475 aa  68.6  0.00000000003  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_010577  XfasM23_1085  nitrogen metabolism transcriptional regulator, NtrC, Fis family  36.8 
 
 
475 aa  68.6  0.00000000003  Xylella fastidiosa M23  Bacteria  normal  0.0382601  n/a   
 
 
-
 
NC_011145  AnaeK_3251  two component, sigma54 specific, transcriptional regulator, Fis family  30.89 
 
 
465 aa  68.2  0.00000000003  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_011146  Gbem_3413  two component, sigma54 specific, transcriptional regulator, Fis family  36.44 
 
 
453 aa  68.2  0.00000000004  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_008347  Mmar10_0766  two component transcriptional regulator  31.82 
 
 
233 aa  67.8  0.00000000005  Maricaulis maris MCS10  Bacteria  normal  0.528482  normal  0.302775 
 
 
-
 
NC_007644  Moth_2406  response regulator receiver domain-containing protein  34.21 
 
 
124 aa  67.4  0.00000000006  Moorella thermoacetica ATCC 39073  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_3740  two component, sigma-54 specific, Fis family transcriptional regulator  33.62 
 
 
454 aa  67.4  0.00000000006  Geobacter uraniireducens Rf4  Bacteria  normal  0.0840186  n/a   
 
 
-
 
NC_007404  Tbd_0904  two component Fis family transcriptional regulator  33.33 
 
 
454 aa  67.4  0.00000000007  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.629928  normal 
 
 
-
 
NC_012918  GM21_3475  two component, sigma54 specific, transcriptional regulator, Fis family  33.05 
 
 
453 aa  67  0.00000000007  Geobacter sp. M21  Bacteria  n/a    normal  0.0804749 
 
 
-
 
NC_010814  Glov_1657  two component, sigma54 specific, transcriptional regulator, Fis family  36.21 
 
 
456 aa  67  0.00000000008  Geobacter lovleyi SZ  Bacteria  normal  0.0365007  n/a   
 
 
-
 
NC_009523  RoseRS_0337  response regulator receiver protein  35.65 
 
 
139 aa  67  0.00000000008  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.0132867 
 
 
-
 
NC_008752  Aave_0872  two component, sigma54 specific, Fis family transcriptional regulator  34.4 
 
 
471 aa  67  0.00000000008  Acidovorax citrulli AAC00-1  Bacteria  normal  normal  0.0650247 
 
 
-
 
NC_002939  GSU0963  sigma-54 dependent DNA-binding response regulator  29.92 
 
 
467 aa  66.6  0.00000000009  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009719  Plav_1017  two component transcriptional regulator  33.33 
 
 
229 aa  66.6  0.00000000009  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.957911  normal  0.735899 
 
 
-
 
NC_002939  GSU2915  sigma-54 dependent DNA-binding response regulator  31.67 
 
 
457 aa  66.6  0.0000000001  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_009767  Rcas_0846  response regulator receiver protein  35.65 
 
 
139 aa  66.6  0.0000000001  Roseiflexus castenholzii DSM 13941  Bacteria  normal  hitchhiker  0.00282438 
 
 
-
 
NC_011146  Gbem_1522  two component, sigma54 specific, transcriptional regulator, Fis family  27.2 
 
 
461 aa  66.2  0.0000000001  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_6621  histidine kinase  35.34 
 
 
552 aa  66.6  0.0000000001  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_0555  two component, sigma54 specific, Fis family transcriptional regulator  33.33 
 
 
457 aa  66.6  0.0000000001  Geobacter metallireducens GS-15  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_2428  response regulator receiver domain-containing protein  30.95 
 
 
128 aa  66.2  0.0000000001  Geobacter metallireducens GS-15  Bacteria  normal  0.0310268  normal 
 
 
-
 
NC_013173  Dbac_2713  two component, sigma54 specific, transcriptional regulator, Fis family  33.33 
 
 
454 aa  66.6  0.0000000001  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009901  Spea_3347  DNA-binding transcriptional regulator TorR  31.2 
 
 
236 aa  66.2  0.0000000001  Shewanella pealeana ATCC 700345  Bacteria  decreased coverage  0.000384276  n/a   
 
 
-
 
NC_013456  VEA_002219  copper-sensing two-component system response regulator CpxR  34.68 
 
 
229 aa  66.2  0.0000000001  Vibrio sp. Ex25  Bacteria  unclonable  0.0000000572967  n/a   
 
 
-
 
NC_007778  RPB_1961  two component transcriptional regulator  32.28 
 
 
240 aa  66.2  0.0000000001  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.326957  normal 
 
 
-
 
NC_010338  Caul_3286  two component transcriptional regulator  33.87 
 
 
239 aa  66.2  0.0000000001  Caulobacter sp. K31  Bacteria  normal  0.0994211  normal 
 
 
-
 
NC_007912  Sde_0499  response regulator receiver domain-containing protein  36.13 
 
 
473 aa  66.2  0.0000000001  Saccharophagus degradans 2-40  Bacteria  normal  0.021061  normal 
 
 
-
 
NC_009485  BBta_2142  chemotaxis protein cheY  34.13 
 
 
121 aa  66.2  0.0000000001  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009675  Anae109_4257  two component, sigma54 specific, Fis family transcriptional regulator  35.59 
 
 
463 aa  66.2  0.0000000001  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_008609  Ppro_0435  response regulator receiver protein  31.03 
 
 
124 aa  66.6  0.0000000001  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.00876892  n/a   
 
 
-
 
NC_011901  Tgr7_0022  two component, sigma54 specific, transcriptional regulator, Fis family  37.6 
 
 
453 aa  65.5  0.0000000002  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  0.0914573  n/a   
 
 
-
 
NC_010814  Glov_2633  two component, sigma54 specific, transcriptional regulator, Fis family  32.81 
 
 
467 aa  65.9  0.0000000002  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_004347  SO_1228  DNA-binding transcriptional regulator TorR  30.95 
 
 
236 aa  65.9  0.0000000002  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_007204  Psyc_1538  response regulator receiver protein  31.36 
 
 
579 aa  65.9  0.0000000002  Psychrobacter arcticus 273-4  Bacteria  normal  0.970597  normal  0.0596632 
 
 
-
 
NC_009092  Shew_0114  response regulator receiver protein  30.47 
 
 
120 aa  65.5  0.0000000002  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_4089  two component transcriptional regulator, winged helix family  32.28 
 
 
240 aa  65.9  0.0000000002  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.404092  n/a   
 
 
-
 
NC_009783  VIBHAR_00149  transcriptional regulator CpxR  33.6 
 
 
229 aa  66.2  0.0000000002  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009052  Sbal_3217  DNA-binding transcriptional regulator TorR  31.75 
 
 
236 aa  65.9  0.0000000002  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_0339  PAS/PAC sensor hybrid histidine kinase  33.6 
 
 
1390 aa  65.9  0.0000000002  Mycobacterium sp. JLS  Bacteria  normal  0.726297  normal  0.77171 
 
 
-
 
NC_008146  Mmcs_0350  PAS/PAC sensor hybrid histidine kinase  33.6 
 
 
1390 aa  65.9  0.0000000002  Mycobacterium sp. MCS  Bacteria  normal  0.0937102  n/a   
 
 
-
 
NC_008705  Mkms_0360  PAS/PAC sensor hybrid histidine kinase  33.6 
 
 
1390 aa  65.9  0.0000000002  Mycobacterium sp. KMS  Bacteria  normal  normal  0.592677 
 
 
-
 
NC_009665  Shew185_3217  DNA-binding transcriptional regulator TorR  30.95 
 
 
236 aa  65.1  0.0000000003  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_2784  response regulator receiver protein  31.62 
 
 
125 aa  65.5  0.0000000003  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.0945133  n/a   
 
 
-
 
NC_011663  Sbal223_1150  DNA-binding transcriptional regulator TorR  30.95 
 
 
236 aa  65.1  0.0000000003  Shewanella baltica OS223  Bacteria  normal  normal  0.202106 
 
 
-
 
NC_007404  Tbd_1625  response regulator receiver domain-containing protein  34.21 
 
 
120 aa  65.1  0.0000000003  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  normal  0.608115 
 
 
-
 
NC_009253  Dred_1312  two component, sigma54 specific, Fis family transcriptional regulator  33.33 
 
 
455 aa  65.1  0.0000000003  Desulfotomaculum reducens MI-1  Bacteria  normal  0.502008  n/a   
 
 
-
 
NC_009997  Sbal195_3356  DNA-binding transcriptional regulator TorR  30.95 
 
 
236 aa  65.1  0.0000000003  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_1364  two component, sigma54 specific, Fis family transcriptional regulator  31.45 
 
 
485 aa  65.1  0.0000000003  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_013440  Hoch_2510  two component, sigma54 specific, transcriptional regulator, Fis family  32.76 
 
 
472 aa  65.1  0.0000000003  Haliangium ochraceum DSM 14365  Bacteria  normal  0.0791346  normal 
 
 
-
 
NC_012918  GM21_2694  two component, sigma54 specific, transcriptional regulator, Fis family  26.4 
 
 
461 aa  65.1  0.0000000003  Geobacter sp. M21  Bacteria  n/a    hitchhiker  7.62039e-17 
 
 
-
 
NC_008321  Shewmr4_1047  DNA-binding transcriptional regulator TorR  31.2 
 
 
236 aa  65.1  0.0000000003  Shewanella sp. MR-4  Bacteria  normal  0.499715  normal  0.229032 
 
 
-
 
NC_008322  Shewmr7_1112  DNA-binding transcriptional regulator TorR  31.2 
 
 
236 aa  65.1  0.0000000003  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_010725  Mpop_2960  PAS/PAC sensor hybrid histidine kinase  32.81 
 
 
622 aa  65.5  0.0000000003  Methylobacterium populi BJ001  Bacteria  normal  normal 
 
 
-
 
NC_008577  Shewana3_1051  DNA-binding transcriptional regulator TorR  31.2 
 
 
236 aa  65.1  0.0000000003  Shewanella sp. ANA-3  Bacteria  normal  normal  0.44318 
 
 
-
 
NC_008752  Aave_2526  two component transcriptional regulator  33.87 
 
 
262 aa  65.1  0.0000000003  Acidovorax citrulli AAC00-1  Bacteria  normal  0.262723  normal  0.926116 
 
 
-
 
NC_011728  BbuZS7_0791  acetoacetate metabolism regulatory protein AtoC (Ornithine/argininedecarboxylase inhibitor)  34.19 
 
 
451 aa  64.7  0.0000000004  Borrelia burgdorferi ZS7  Bacteria  normal  0.261898  n/a   
 
 
-
 
NC_004347  SO_3230  flagellar regulatory protein C  32.03 
 
 
446 aa  64.7  0.0000000004  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_013216  Dtox_1013  two component, sigma54 specific, transcriptional regulator, Fis family  32.76 
 
 
456 aa  64.7  0.0000000004  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal  0.0616674 
 
 
-
 
NC_013223  Dret_0097  two component, sigma54 specific, transcriptional regulator, Fis family  32.48 
 
 
448 aa  65.1  0.0000000004  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_009767  Rcas_0421  two component transcriptional regulator  31.16 
 
 
245 aa  64.7  0.0000000004  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.0518956  normal 
 
 
-
 
NC_009972  Haur_3391  two component transcriptional regulator  32.8 
 
 
227 aa  64.7  0.0000000004  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.141218  n/a   
 
 
-
 
NC_007969  Pcryo_1717  nitrogen metabolism transcriptional regulator, NtrC, Fis family  31.36 
 
 
570 aa  64.7  0.0000000004  Psychrobacter cryohalolentis K5  Bacteria  normal  normal  0.336795 
 
 
-
 
NC_008576  Mmc1_3443  response regulator receiver protein  29.6 
 
 
223 aa  64.7  0.0000000004  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_013422  Hneap_1813  two component transcriptional regulator, winged helix family  31.45 
 
 
236 aa  64.7  0.0000000004  Halothiobacillus neapolitanus c2  Bacteria  normal  0.106078  n/a   
 
 
-
 
NC_002939  GSU1289  chemotaxis protein CheY  27.78 
 
 
121 aa  64.3  0.0000000005  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_008789  Hhal_2168  response regulator receiver protein  32.81 
 
 
120 aa  64.3  0.0000000006  Halorhodospira halophila SL1  Bacteria  normal  0.747517  n/a   
 
 
-
 
NC_002967  TDE1969  sigma-54 dependent transcriptional regulator/response regulator  32.2 
 
 
473 aa  63.9  0.0000000006  Treponema denticola ATCC 35405  Bacteria  normal  0.440374  n/a   
 
 
-
 
NC_007516  Syncc9605_1618  two component transcriptional regulator  28.8 
 
 
254 aa  63.9  0.0000000006  Synechococcus sp. CC9605  Bacteria  normal  normal  0.218753 
 
 
-
 
NC_011675  PHATRDRAFT_11994  diatom response regulator 2  30.4 
 
 
222 aa  63.9  0.0000000006  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  n/a   
 
 
-
 
NC_008609  Ppro_1606  response regulator receiver protein  28.8 
 
 
121 aa  63.9  0.0000000006  Pelobacter propionicus DSM 2379  Bacteria  normal  n/a   
 
 
-
 
NC_008709  Ping_2985  fused histidine kinase sensor/response regulator  32 
 
 
1121 aa  64.3  0.0000000006  Psychromonas ingrahamii 37  Bacteria  normal  normal  0.446873 
 
 
-
 
NC_010814  Glov_0143  two component, sigma54 specific, transcriptional regulator, Fis family  32.54 
 
 
449 aa  63.9  0.0000000007  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009675  Anae109_1798  two component, sigma54 specific, Fis family transcriptional regulator  29.92 
 
 
466 aa  63.9  0.0000000007  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.634231  normal 
 
 
-
 
NC_007520  Tcr_0906  nitrogen metabolism transcriptional regulator, NtrC, Fis family  34.35 
 
 
487 aa  63.9  0.0000000007  Thiomicrospira crunogena XCL-2  Bacteria  hitchhiker  0.0000910984  n/a   
 
 
-
 
NC_009523  RoseRS_4619  two component transcriptional regulator  31.16 
 
 
245 aa  63.9  0.0000000007  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.0926269 
 
 
-
 
NC_010571  Oter_3296  two component, sigma54 specific, Fis family transcriptional regulator  35 
 
 
486 aa  63.9  0.0000000007  Opitutus terrae PB90-1  Bacteria  normal  0.533211  normal  0.648168 
 
 
-
 
NC_009783  VIBHAR_00584  response regulator  36.44 
 
 
467 aa  63.9  0.0000000007  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_014158  Tpau_2483  response regulator receiver and ANTAR domain protein  36.64 
 
 
205 aa  63.5  0.0000000008  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_0915  chemotaxis protein CheY  31.75 
 
 
122 aa  63.5  0.0000000008  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007925  RPC_4546  two component transcriptional regulator  33.86 
 
 
229 aa  63.5  0.0000000008  Rhodopseudomonas palustris BisB18  Bacteria  normal  normal  0.926448 
 
 
-
 
NC_013173  Dbac_0628  two component, sigma54 specific, transcriptional regulator, Fis family  32.26 
 
 
446 aa  63.5  0.0000000008  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
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