Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcryo_1717 |
Symbol | |
ID | 4034597 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter cryohalolentis K5 |
Kingdom | Bacteria |
Replicon accession | NC_007969 |
Strand | + |
Start bp | 2125436 |
End bp | 2127148 |
Gene Length | 1713 bp |
Protein Length | 570 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637974182 |
Product | nitrogen metabolism transcriptional regulator, NtrC, Fis family |
Protein accession | YP_580978 |
Protein GI | 93006541 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | [TIGR01818] nitrogen regulation protein NR(I) |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.336795 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCAGT ATAATGACAC CCAATCTCTT ACAAGCAATG AGCGAACGCC AATGGTCACG GTCAATAACA GTCCTGATAA TGAGCCTGCC ACTTTGTGGC TCATTGATGA TGATGCGGCG CTGCGTATGG TACTTGCAGA TACTTTTGAA GACGCTGGAT TGACGGTTAT CAGCTTTACC CAAGCACAAG CAGCATGGAC ACGCCTCAAT GATATTCTAG AATCGTCAGA GTCAATCGCC TTGTTACCTG ATGTGATATT GACCGATATT CGTATGCCGA TGATGGATGG TCTGTCGTTT AGTGACTGGG TACACAAGCA CTTTCCTAAG CTTCCGATTG TCATTATGAC AGCGCATTCA GACCTTACTT CTGCCATTAG CAGCTATCAG ACTGGTGCAT TTGAATATCT GCCCAAGCCG TTTGATTTAG ATGATGCGGT CGCAACGATT TATAAAGCCA TTAATTATCA GCCGAATCTA GTCATATCAA ACCATTCGAT CGAGTCTAAT ACGAATGTAA GTACCGATAC CAAAGAACAG CCTGTGAACA AACCAAATGC AGCCAAATCA GCTAGAAAAA CCCCTAAAGC TGCTGAAAGT AAAACTCATG AAAAACCCAA ACCCCAAACC AATAACAATC CAAGCGGCAT CATTGGTCAA TCACAAGCCA TGCAAACGGT ATTTCGTGCC ATTGGTAGAC TTGCGCACTC ACCGATTACC GTTTTAATCA CTGGTGAATC AGGTACAGGT AAAGAGTTGG TCGCTAGCGC TTTACATCAG CACTCACCGC GACACAATAA AACCTTTATT GCACTAAATA TGGCAGCAAT TCCCCATGAT TTGATTGAGT CTGAATTGTT TGGTCATGAA AAAGGCGCAT TCACTGGCGC CACAACTTCA CGCCAAGGTC GTTTTGAGCA AGCAGATGGC GGCACGTTAT TTTTAGATGA AATCGGTGAC ATGCCTTTTA GTACCCAAAC GCGGCTGCTA CGAGTGCTGG CAAATGGCGA ATTTTTTCGC GTGGGTGGTC AGCAGCCCGT CAAAGTAGAT GTACGCATTA TTGCCGCTAC CCATCAAAAC TTGGAAGAAT TGGTCAAACA GGGTAAATTC CGTGAGGATC TATTTTATCG CCTGAATGTC ATTCGCCTGC CATTGCCGCC CTTACGGACT CGCCGCGAGG ACGTACCAGC ATTAACCACT TATTTTATGC AGCGCGCTGC TGAGCAGATG AATACGGCAC CAAAACAGTT ACATCCGGCA GCAATGCAAA TGATGCAGTC TTTTGAATGG CGCGGTAATG TCCGTCAACT TGAGAATGTC TGTCTCTGGC TGACAGTAAT GGCGACTGGC GACACCGTTA TGATCGATGA CTTGCCTCCA GAGTTGCTCG AAAACATCTC CTCTACTCTA AACAATCAAC AGCAGCATGT ATCCTCACAA GACGCTATTG AAAATAATCA TCTACAAAGT CAGGATACTT TTGGCACCCA AAGCTGGCAA CAAGCTTTAG GTATTTGGGC GAAGCAGTCA CTACAAACTG GCGCAACCGA TATTTTACAG ACAGCAACAC CTGAGTTTGA ACGGGTCTTG CTAACCGCAG CGCTCCATCA TAGCGGCGGC AAAAAGATAG CTGCTGCCAA TTTACTTGGC TGGGGACGCA ATACGCTGAC ACGTAAATTA CAACAGCTGA ACCTCTCATC ATATCAAGAG TAA
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Protein sequence | MTQYNDTQSL TSNERTPMVT VNNSPDNEPA TLWLIDDDAA LRMVLADTFE DAGLTVISFT QAQAAWTRLN DILESSESIA LLPDVILTDI RMPMMDGLSF SDWVHKHFPK LPIVIMTAHS DLTSAISSYQ TGAFEYLPKP FDLDDAVATI YKAINYQPNL VISNHSIESN TNVSTDTKEQ PVNKPNAAKS ARKTPKAAES KTHEKPKPQT NNNPSGIIGQ SQAMQTVFRA IGRLAHSPIT VLITGESGTG KELVASALHQ HSPRHNKTFI ALNMAAIPHD LIESELFGHE KGAFTGATTS RQGRFEQADG GTLFLDEIGD MPFSTQTRLL RVLANGEFFR VGGQQPVKVD VRIIAATHQN LEELVKQGKF REDLFYRLNV IRLPLPPLRT RREDVPALTT YFMQRAAEQM NTAPKQLHPA AMQMMQSFEW RGNVRQLENV CLWLTVMATG DTVMIDDLPP ELLENISSTL NNQQQHVSSQ DAIENNHLQS QDTFGTQSWQ QALGIWAKQS LQTGATDILQ TATPEFERVL LTAALHHSGG KKIAAANLLG WGRNTLTRKL QQLNLSSYQE
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