| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_1047 |
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| Symbol | |
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| ID | 4251120 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 1222752 |
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| End bp | 1223462 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638117620 |
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| Product | DNA-binding transcriptional regulator TorR |
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| Protein accession | YP_733184 |
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| Protein GI | 113969391 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.499715 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.229032 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTATA GTGTGCTCGT TGTCGATGAT GAAGCGGTTA TTCGTGCTCG ATTGAAAGGG
TATTTTGAAA AAGAAGGTTA CCGCGTTGTC GAGGCGGCCG ATGGCGAGCA GATGTGGCAC
GAGTTTAATC GTCAACATAT TGATTTAATT ATGTTAGACA TTAACCTACC CGGGGTGGAT
GGTTTAAGCT TAACCCGTGA GTTACGTAGC CGCTCCCATG TGGGGATTAT CTTAGTTTCG
GGCCGTGATG AATCGATTGA TAAAATCGTT GGCCTTGAGA TGGGCGCCGA TGATTATGTG
ACTAAGCCCT TCGAGCTTCG GGAGCTATTG GTTAGGGTTA AAAACCTACT GTGGCGGATT
TCTCTGGTAA AACAAGCCGA ACAAGCGCTG GTGCAGGAAT TATCCGAGCC CGATGATGTG
ATGAGTTTTG AAGGCTATCG GCTTGAATTA AACAGCCGTA AGTTGCGCCA AGGGGAGACG
CTTATCAAGC TCACTAAGGC CGAATTTGAG TTATTAACCG CCTTTGCTTT GCATCCGCAG
CAGGTACTTT CCCGCGAGCG CTTAATGCAG CAAACCAGCC ATCGCAATCA GGATGTGAAT
GACAGAACCA TAGATGTCAT CATCCGCCGT CTGCGTAATA AGCTCAATCC CGAACTCTTT
GTTACTGTCC ATGGTGAGGG TTATTTGTTT GCCGCTAAGG TGGATGATTG A
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| Protein sequence | MAYSVLVVDD EAVIRARLKG YFEKEGYRVV EAADGEQMWH EFNRQHIDLI MLDINLPGVD
GLSLTRELRS RSHVGIILVS GRDESIDKIV GLEMGADDYV TKPFELRELL VRVKNLLWRI
SLVKQAEQAL VQELSEPDDV MSFEGYRLEL NSRKLRQGET LIKLTKAEFE LLTAFALHPQ
QVLSRERLMQ QTSHRNQDVN DRTIDVIIRR LRNKLNPELF VTVHGEGYLF AAKVDD
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