Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr7_1112 |
Symbol | |
ID | 4258754 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-7 |
Kingdom | Bacteria |
Replicon accession | NC_008322 |
Strand | + |
Start bp | 1285101 |
End bp | 1285811 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638121733 |
Product | DNA-binding transcriptional regulator TorR |
Protein accession | YP_737168 |
Protein GI | 114046618 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCTATA GTGTGCTCGT TGTCGATGAT GAAGCGGTTA TTCGTGCTCG ATTGAAAGGG TATTTTGAAA AAGAAGGTTA CCGCGTTGTC GAGGCGGCCG ATGGCGAGCA GATGTGGCAC GAGTTTAATC GTCAACATAT TGATTTAATT ATGTTAGACA TTAACCTGCC CGGGGTGGAT GGTTTAAGCT TAACCCGTGA GTTACGTAGC CGCTCCCATG TGGGGATTAT CTTAGTCTCG GGCCGTGATG AATCGATTGA TAAAATCGTT GGCCTTGAGA TGGGCGCCGA TGATTATGTG ACTAAGCCCT TCGAGCTGCG GGAGCTATTG GTTAGGGTTA AAAATCTACT GTGGCGGATT TCTCTGGTAA AACAAGCCGA ACAAGCGCTG GTGCAGGAAT TATCCGAGCC CGATGATGTG ATGAGTTTTG AAGGCTATCG GCTTGAATTA AACAGCCGTA AGCTGCGCCA AGGGGAGGAA CTTATCAAGC TCACTAAGGC CGAATTTGAG TTGTTAACCG CCTTTGCTTT GCATCCGCAG CAGGTACTTT CCCGCGAGCG CTTAATGCAG CAAACCAGTC ATCGCAATCA GGATGTGAAT GACAGAACCA TAGATGTCAT CATCCGTCGC CTGCGTAATA AGCTTAATCC CGAACTCTTT GTCACCGTCC ATGGTGAGGG CTATTTGTTT GCAGCTAAGG TGGATGACTA A
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Protein sequence | MAYSVLVVDD EAVIRARLKG YFEKEGYRVV EAADGEQMWH EFNRQHIDLI MLDINLPGVD GLSLTRELRS RSHVGIILVS GRDESIDKIV GLEMGADDYV TKPFELRELL VRVKNLLWRI SLVKQAEQAL VQELSEPDDV MSFEGYRLEL NSRKLRQGEE LIKLTKAEFE LLTAFALHPQ QVLSRERLMQ QTSHRNQDVN DRTIDVIIRR LRNKLNPELF VTVHGEGYLF AAKVDD
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