| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_1802 |
|---|
| Symbol | |
|---|
| ID | 8544184 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | - |
|---|
| Start bp | 2491035 |
|---|
| End bp | 2491511 |
|---|
| Gene Length | 477 bp |
|---|
| Protein Length | 158 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 646386508 |
|---|
| Product | response regulator receiver protein |
|---|
| Protein accession | YP_003266243 |
|---|
| Protein GI | 262195034 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.16578 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACATC CGAATCCAGA CAACGGTGCG TCGGAGAACG GTGCCGTCCG CCGTCGGATC
ATCCTTGCAG AGGACGACGC AGCGTTCCGC CGGTTCCTCG TCGACGCGCT GAGCGTAGAG
GGCTTCGAGG TCATCGCTGC AAAGAATGGC CTCGAGCTGC TCGATCTACT CAACTTCGCC
GCCTATCCCG ACCAGGGGCT CACGCCCTTC GACGCGGTGG TCACCGATTT CCACCTCCCC
GGCCTCACCG GCCTCGAAGT GCTCGAGGGT CTGGCGGTCG CGGGCGCAGC CGGGCGCGTC
ATCGTCATCT CCGGCTTCGC GGACGAGGCC ACCATGCGCT GGGCGCGCTC GATCGGCGCC
TCGGCCACGC TGGCCAAACC CTTCCAGATC GACGAGCTCG TCGCCGCCCT CGAAGAGGCG
ATGGAACACG AGCTCGACGC GCCCTCGCTG GCTGCGGCCA ACAGCGAGCA GGCGTAG
|
|---|
| Protein sequence | MKHPNPDNGA SENGAVRRRI ILAEDDAAFR RFLVDALSVE GFEVIAAKNG LELLDLLNFA
AYPDQGLTPF DAVVTDFHLP GLTGLEVLEG LAVAGAAGRV IVISGFADEA TMRWARSIGA
SATLAKPFQI DELVAALEEA MEHELDAPSL AAANSEQA
|
|---|
| |