| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_1051 |
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| Symbol | |
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| ID | 4479396 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | + |
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| Start bp | 1230325 |
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| End bp | 1231035 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 639725594 |
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| Product | DNA-binding transcriptional regulator TorR |
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| Protein accession | YP_868692 |
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| Protein GI | 117919500 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.44318 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTATA GTGTGCTCGT TGTCGATGAT GAAGCGGTGA TTCGTGCTCG ATTGAAAGGG
TATTTTGAAA AAGAAGGTTA CCGCGTTGTC GAGGCGGCCG ATGGCGAGCA GATGTGGCAC
GAGTTTAATC GTCAACATAT TGATTTGATT ATGTTAGACA TTAACCTGCC TGGAGTAGAT
GGCTTAAGCT TAACCCGTGA GTTACGTAGC CGCTCCCATG TGGGGATTAT CTTAGTCTCG
GGCCGTGATG AATCAATTGA TAAAATCGTT GGTCTGGAGA TGGGCGCCGA TGATTATGTG
ACTAAGCCCT TCGAGCTGCG GGAGCTATTG GTTAGGGTTA AAAACCTACT GTGGCGGATT
TCTCTGGTAA AACAAGCCGA ACAAGCGCTG GTGCAGGAAT TATCCGAGCC CGATGATGTG
ATGAGTTTTG AAGGTTATCG GCTCGAGTTA AACAGCCGTA AGCTGCGCCA AGGGGAGGAG
CTTATCAAGC TCACTAAGGC CGAATTTGAG TTGTTAACCG CCTTTGCTTT GCATCCGCAG
CAGGTACTTT CCCGTGAGCG CTTAATGCAG CAAACCAGTC ATCGTAATCA GGATGTGAAT
GACAGAACCA TAGATGTCAT CATCCGTCGC CTGCGTAATA AGCTCAATCC CGAACTCTTT
GTCACAGTCC ATGGTGAGGG CTATTTGTTT GCCGCTAAGG TGGATGACTA A
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| Protein sequence | MAYSVLVVDD EAVIRARLKG YFEKEGYRVV EAADGEQMWH EFNRQHIDLI MLDINLPGVD
GLSLTRELRS RSHVGIILVS GRDESIDKIV GLEMGADDYV TKPFELRELL VRVKNLLWRI
SLVKQAEQAL VQELSEPDDV MSFEGYRLEL NSRKLRQGEE LIKLTKAEFE LLTAFALHPQ
QVLSRERLMQ QTSHRNQDVN DRTIDVIIRR LRNKLNPELF VTVHGEGYLF AAKVDD
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