More than 300 homologs were found in PanDaTox collection
for query gene Slin_2448 on replicon NC_013730
Organism: Spirosoma linguale DSM 74



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013730  Slin_2448  short-chain dehydrogenase/reductase SDR  100 
 
 
257 aa  530  1e-149  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_009441  Fjoh_3794  short-chain dehydrogenase/reductase SDR  49.8 
 
 
262 aa  254  8e-67  Flavobacterium johnsoniae UW101  Bacteria  normal  n/a   
 
 
-
 
NC_008255  CHU_3621  short-chain dehydrogenase  47.86 
 
 
258 aa  248  7e-65  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  normal 
 
 
-
 
NC_013061  Phep_3131  short-chain dehydrogenase/reductase SDR  48.63 
 
 
258 aa  246  3e-64  Pedobacter heparinus DSM 2366  Bacteria  normal  0.859893  normal 
 
 
-
 
NC_013132  Cpin_3329  short-chain dehydrogenase/reductase SDR  47.47 
 
 
256 aa  245  6e-64  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.227726  hitchhiker  0.00265893 
 
 
-
 
NC_008312  Tery_1795  short-chain dehydrogenase/reductase SDR  39.43 
 
 
264 aa  189  4e-47  Trichodesmium erythraeum IMS101  Bacteria  normal  0.711928  normal 
 
 
-
 
NC_013161  Cyan8802_0137  short-chain dehydrogenase/reductase SDR  41.74 
 
 
261 aa  181  1e-44  Cyanothece sp. PCC 8802  Bacteria  normal  hitchhiker  0.00000076045 
 
 
-
 
NC_011726  PCC8801_0140  short-chain dehydrogenase/reductase SDR  41.28 
 
 
261 aa  178  9e-44  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_013132  Cpin_6133  short-chain dehydrogenase/reductase SDR  38.04 
 
 
263 aa  174  1.9999999999999998e-42  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal 
 
 
-
 
NC_011729  PCC7424_1836  short-chain dehydrogenase/reductase SDR  38.63 
 
 
260 aa  172  5e-42  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_013440  Hoch_3300  short-chain dehydrogenase/reductase SDR  40.57 
 
 
272 aa  171  9e-42  Haliangium ochraceum DSM 14365  Bacteria  normal  0.605078  normal  0.514892 
 
 
-
 
NC_011729  PCC7424_4642  short-chain dehydrogenase/reductase SDR  38.19 
 
 
264 aa  170  2e-41  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  0.0000000179752 
 
 
-
 
NC_014148  Plim_1352  short-chain dehydrogenase/reductase SDR  40.69 
 
 
271 aa  169  4e-41  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.708878  n/a   
 
 
-
 
NC_007413  Ava_1011  Short-chain dehydrogenase/reductase SDR  40.18 
 
 
258 aa  169  5e-41  Anabaena variabilis ATCC 29413  Bacteria  normal  0.968961  hitchhiker  0.00922057 
 
 
-
 
NC_013165  Shel_18580  short-chain dehydrogenase of unknown substrate specificity  36.9 
 
 
258 aa  167  1e-40  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.489964  normal 
 
 
-
 
NC_008009  Acid345_1611  short-chain dehydrogenase/reductase SDR  37.4 
 
 
262 aa  166  4e-40  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_010571  Oter_2864  short-chain dehydrogenase/reductase SDR  41.03 
 
 
289 aa  164  2.0000000000000002e-39  Opitutus terrae PB90-1  Bacteria  normal  normal  0.327148 
 
 
-
 
NC_008463  PA14_08440  putative short chain alcohol dehydrogenase  40.32 
 
 
266 aa  163  3e-39  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  hitchhiker  0.0000000229698 
 
 
-
 
NC_012917  PC1_2681  short-chain dehydrogenase/reductase SDR  36.99 
 
 
261 aa  162  6e-39  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_012792  Vapar_6207  short-chain dehydrogenase/reductase SDR  41.38 
 
 
277 aa  161  9e-39  Variovorax paradoxus S110  Bacteria  normal  n/a   
 
 
-
 
NC_009565  TBFG_11577  ketoacyl reductase  38.62 
 
 
267 aa  160  2e-38  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_2231  short-chain dehydrogenase/reductase SDR  37.7 
 
 
263 aa  160  2e-38  Haliangium ochraceum DSM 14365  Bacteria  normal  0.19807  normal 
 
 
-
 
NC_013501  Rmar_1809  short-chain dehydrogenase/reductase SDR  37.34 
 
 
263 aa  160  2e-38  Rhodothermus marinus DSM 4252  Bacteria  normal  n/a   
 
 
-
 
NC_011666  Msil_1841  short-chain dehydrogenase/reductase SDR  40.33 
 
 
266 aa  159  4e-38  Methylocella silvestris BL2  Bacteria  n/a    normal  0.197421 
 
 
-
 
NC_008228  Patl_0906  short-chain dehydrogenase/reductase SDR  35.74 
 
 
273 aa  159  4e-38  Pseudoalteromonas atlantica T6c  Bacteria  normal  0.127379  n/a   
 
 
-
 
NC_006369  lpl1378  hypothetical protein  35.57 
 
 
259 aa  159  6e-38  Legionella pneumophila str. Lens  Bacteria  n/a    n/a   
 
 
-
 
NC_010002  Daci_2044  short-chain dehydrogenase/reductase SDR  40.43 
 
 
260 aa  158  6e-38  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.756544 
 
 
-
 
NC_009656  PSPA7_0799  short chain dehydrogenase/reductase family oxidoreductase  38.74 
 
 
266 aa  158  7e-38  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_007777  Francci3_0351  short-chain dehydrogenase/reductase SDR  38.04 
 
 
291 aa  158  7e-38  Frankia sp. CcI3  Bacteria  normal  normal 
 
 
-
 
NC_006368  lpp1382  hypothetical protein  34.78 
 
 
259 aa  157  1e-37  Legionella pneumophila str. Paris  Bacteria  n/a    n/a   
 
 
-
 
NC_009439  Pmen_3938  short-chain dehydrogenase/reductase SDR  37.01 
 
 
262 aa  157  1e-37  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_1536  short-chain dehydrogenase/reductase SDR  35.37 
 
 
260 aa  156  2e-37  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_1889  short-chain dehydrogenase/reductase SDR  36.09 
 
 
264 aa  156  2e-37  Cyanothece sp. PCC 7425  Bacteria  normal  0.0188274  normal 
 
 
-
 
NC_007413  Ava_1572  Short-chain dehydrogenase/reductase SDR  34.88 
 
 
263 aa  155  4e-37  Anabaena variabilis ATCC 29413  Bacteria  normal  normal  0.577459 
 
 
-
 
NC_007908  Rfer_0310  short-chain dehydrogenase/reductase SDR  39.6 
 
 
284 aa  155  5.0000000000000005e-37  Rhodoferax ferrireducens T118  Bacteria  normal  n/a   
 
 
-
 
NC_013235  Namu_0089  short-chain dehydrogenase/reductase SDR  38.02 
 
 
264 aa  155  5.0000000000000005e-37  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_014248  Aazo_3911  short-chain dehydrogenase/reductase SDR  35.43 
 
 
267 aa  154  1e-36  'Nostoc azollae' 0708  Bacteria  normal  0.322734  n/a   
 
 
-
 
NC_013132  Cpin_5008  short-chain dehydrogenase/reductase SDR  34.44 
 
 
298 aa  153  2e-36  Chitinophaga pinensis DSM 2588  Bacteria  normal  0.0468951  hitchhiker  0.00252787 
 
 
-
 
NC_007005  Psyr_4572  Short-chain dehydrogenase/reductase SDR  37.35 
 
 
258 aa  154  2e-36  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal 
 
 
-
 
NC_013515  Smon_1006  short-chain dehydrogenase/reductase SDR  32.42 
 
 
257 aa  153  2.9999999999999998e-36  Streptobacillus moniliformis DSM 12112  Bacteria  n/a    n/a   
 
 
-
 
NC_010803  Clim_0189  short-chain dehydrogenase/reductase SDR  38.1 
 
 
267 aa  152  4e-36  Chlorobium limicola DSM 245  Bacteria  hitchhiker  0.00000709968  n/a   
 
 
-
 
NC_013517  Sterm_2330  short-chain dehydrogenase/reductase SDR  37.05 
 
 
257 aa  152  7e-36  Sebaldella termitidis ATCC 33386  Bacteria  hitchhiker  0.000620196  n/a   
 
 
-
 
NC_004578  PSPTO_0601  oxidoreductase, short chain dehydrogenase/reductase family  36.96 
 
 
258 aa  150  1e-35  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_013421  Pecwa_1556  short-chain dehydrogenase/reductase SDR  34.96 
 
 
261 aa  150  1e-35  Pectobacterium wasabiae WPP163  Bacteria  normal  0.596662  n/a   
 
 
-
 
NC_013132  Cpin_4109  short-chain dehydrogenase/reductase SDR  35.22 
 
 
269 aa  151  1e-35  Chitinophaga pinensis DSM 2588  Bacteria  normal  hitchhiker  0.00421935 
 
 
-
 
NC_013204  Elen_0666  short-chain dehydrogenase/reductase SDR  37.8 
 
 
343 aa  150  2e-35  Eggerthella lenta DSM 2243  Bacteria  normal  0.019294  hitchhiker  0.000464867 
 
 
-
 
NC_010511  M446_3398  short-chain dehydrogenase/reductase SDR  40.34 
 
 
265 aa  150  2e-35  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.162957 
 
 
-
 
NC_008639  Cpha266_0226  short-chain dehydrogenase/reductase SDR  40.62 
 
 
259 aa  150  2e-35  Chlorobium phaeobacteroides DSM 266  Bacteria  normal  0.996462  n/a   
 
 
-
 
NC_011891  A2cp1_3990  short-chain dehydrogenase/reductase SDR  42.78 
 
 
266 aa  150  2e-35  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
NC_010831  Cphamn1_0312  short-chain dehydrogenase/reductase SDR  34.38 
 
 
261 aa  150  2e-35  Chlorobium phaeobacteroides BS1  Bacteria  hitchhiker  0.0000113464  decreased coverage  0.000120518 
 
 
-
 
NC_004578  PSPTO_4275  oxidoreductase, short-chain dehydrogenase/reductase family  35.1 
 
 
261 aa  149  4e-35  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_0177  short-chain dehydrogenase/reductase SDR  39.51 
 
 
262 aa  149  6e-35  Mycobacterium sp. JLS  Bacteria  normal  normal  0.721122 
 
 
-
 
NC_013730  Slin_4202  short-chain dehydrogenase/reductase SDR  34 
 
 
344 aa  148  7e-35  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_011145  AnaeK_3912  short-chain dehydrogenase/reductase SDR  41.75 
 
 
266 aa  147  1.0000000000000001e-34  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_013037  Dfer_5585  short-chain dehydrogenase/reductase SDR  34.15 
 
 
265 aa  147  1.0000000000000001e-34  Dyadobacter fermentans DSM 18053  Bacteria  normal  0.892025  normal  0.853623 
 
 
-
 
NC_007492  Pfl01_5106  Short-chain dehydrogenase/reductase SDR  36.36 
 
 
262 aa  147  2.0000000000000003e-34  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.311622  normal  0.753041 
 
 
-
 
NC_008146  Mmcs_0188  short-chain dehydrogenase/reductase SDR  39.02 
 
 
262 aa  147  2.0000000000000003e-34  Mycobacterium sp. MCS  Bacteria  normal  n/a   
 
 
-
 
NC_008705  Mkms_0197  short-chain dehydrogenase/reductase SDR  39.02 
 
 
262 aa  147  2.0000000000000003e-34  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_008726  Mvan_3324  short-chain dehydrogenase/reductase SDR  37.5 
 
 
269 aa  147  2.0000000000000003e-34  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.377978 
 
 
-
 
NC_010511  M446_2996  short-chain dehydrogenase/reductase SDR  36.78 
 
 
268 aa  146  3e-34  Methylobacterium sp. 4-46  Bacteria  normal  normal  0.056073 
 
 
-
 
NC_007760  Adeh_3849  short-chain dehydrogenase/reductase SDR  41.24 
 
 
292 aa  146  3e-34  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.858349  n/a   
 
 
-
 
NC_013202  Hmuk_1178  short-chain dehydrogenase/reductase SDR  38.16 
 
 
259 aa  146  3e-34  Halomicrobium mukohataei DSM 12286  Archaea  normal  0.82399  normal 
 
 
-
 
NC_013517  Sterm_1096  short-chain dehydrogenase/reductase SDR  31.52 
 
 
256 aa  145  5e-34  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_010581  Bind_3244  short-chain dehydrogenase/reductase SDR  37.11 
 
 
262 aa  145  6e-34  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal 
 
 
-
 
NC_011060  Ppha_2686  short-chain dehydrogenase/reductase SDR  43.75 
 
 
258 aa  144  1e-33  Pelodictyon phaeoclathratiforme BU-1  Bacteria  hitchhiker  0.00673203  n/a   
 
 
-
 
NC_013203  Apar_0041  short-chain dehydrogenase/reductase SDR  39.46 
 
 
257 aa  144  1e-33  Atopobium parvulum DSM 20469  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_2216  short-chain dehydrogenase/reductase SDR  34.71 
 
 
266 aa  144  2e-33  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_3538  short-chain dehydrogenase/reductase SDR  38.16 
 
 
259 aa  141  9.999999999999999e-33  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.0177311  normal  0.151964 
 
 
-
 
NC_008726  Mvan_3113  short-chain dehydrogenase/reductase SDR  36.99 
 
 
262 aa  141  9.999999999999999e-33  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.999856 
 
 
-
 
NC_009784  VIBHAR_05256  short-chain dehydrogenase/reductase SDR  34.3 
 
 
259 aa  140  1.9999999999999998e-32  Vibrio harveyi ATCC BAA-1116  Bacteria  n/a    n/a   
 
 
-
 
NC_009338  Mflv_0138  short-chain dehydrogenase/reductase SDR  33.61 
 
 
273 aa  139  4.999999999999999e-32  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_013510  Tcur_2692  short-chain dehydrogenase/reductase SDR  36.8 
 
 
267 aa  138  7e-32  Thermomonospora curvata DSM 43183  Bacteria  decreased coverage  0.0000430049  n/a   
 
 
-
 
NC_013730  Slin_6445  short-chain dehydrogenase/reductase SDR  31.8 
 
 
272 aa  138  7e-32  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_008255  CHU_2064  oxidoreductase ( short-chain dehydrogenase)  36.04 
 
 
264 aa  138  7.999999999999999e-32  Cytophaga hutchinsonii ATCC 33406  Bacteria  normal  0.694867  normal  0.0846624 
 
 
-
 
NC_011004  Rpal_0423  short-chain dehydrogenase/reductase SDR  35.25 
 
 
259 aa  138  8.999999999999999e-32  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.83571  n/a   
 
 
-
 
NC_010338  Caul_3249  short-chain dehydrogenase/reductase SDR  34.82 
 
 
258 aa  137  2e-31  Caulobacter sp. K31  Bacteria  normal  normal  0.559348 
 
 
-
 
NC_007958  RPD_0689  short-chain dehydrogenase/reductase SDR  34.94 
 
 
259 aa  137  2e-31  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_013926  Aboo_0372  short-chain dehydrogenase/reductase SDR  34.76 
 
 
219 aa  137  2e-31  Aciduliprofundum boonei T469  Archaea  normal  n/a   
 
 
-
 
NC_008392  Bamb_6118  short-chain dehydrogenase/reductase SDR  35.06 
 
 
275 aa  136  3.0000000000000003e-31  Burkholderia ambifaria AMMD  Bacteria  normal  0.304156  normal  0.200034 
 
 
-
 
NC_011894  Mnod_4423  short-chain dehydrogenase/reductase SDR  36 
 
 
276 aa  135  5e-31  Methylobacterium nodulans ORS 2060  Bacteria  normal  0.235547  n/a   
 
 
-
 
NC_013730  Slin_0497  short-chain dehydrogenase/reductase SDR  34.52 
 
 
360 aa  135  5e-31  Spirosoma linguale DSM 74  Bacteria  normal  normal 
 
 
-
 
NC_008261  CPF_2906  short chain dehydrogenase/reductase family oxidoreductase  31.97 
 
 
257 aa  135  5e-31  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_011059  Paes_0281  short-chain dehydrogenase/reductase SDR  35.42 
 
 
255 aa  135  6.0000000000000005e-31  Prosthecochloris aestuarii DSM 271  Bacteria  hitchhiker  0.000634692  hitchhiker  0.00117931 
 
 
-
 
NC_008254  Meso_3682  short-chain dehydrogenase/reductase SDR  34.82 
 
 
261 aa  135  6.0000000000000005e-31  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_6469  short-chain dehydrogenase/reductase SDR  36.4 
 
 
263 aa  135  6.0000000000000005e-31  Frankia sp. EAN1pec  Bacteria  normal  normal  0.0477636 
 
 
-
 
NC_009636  Smed_1269  short-chain dehydrogenase/reductase SDR  35.77 
 
 
294 aa  135  9e-31  Sinorhizobium medicae WSM419  Bacteria  normal  0.618635  normal  0.87927 
 
 
-
 
NC_009718  Fnod_0523  short-chain dehydrogenase/reductase SDR  33.76 
 
 
255 aa  134  9.999999999999999e-31  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_007514  Cag_0350  short chain dehydrogenase/reductase family oxidoreductase  36.98 
 
 
259 aa  134  9.999999999999999e-31  Chlorobium chlorochromatii CaD3  Bacteria  hitchhiker  0.000771311  n/a   
 
 
-
 
NC_007778  RPB_0113  short-chain dehydrogenase/reductase SDR  34.14 
 
 
259 aa  134  9.999999999999999e-31  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.886287  normal 
 
 
-
 
NC_009485  BBta_0274  short chain dehydrogenase/reductase family protein  34.66 
 
 
259 aa  133  1.9999999999999998e-30  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_1512  short-chain dehydrogenase/reductase SDR  39.57 
 
 
264 aa  132  3.9999999999999996e-30  Enterobacter sp. 638  Bacteria  normal  normal  0.360234 
 
 
-
 
NC_012793  GWCH70_2271  short-chain dehydrogenase/reductase SDR  35.11 
 
 
262 aa  132  5e-30  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_003295  RSc2321  dehydrogenase/reductase oxidoreductase protein  34.63 
 
 
275 aa  132  5e-30  Ralstonia solanacearum GMI1000  Bacteria  normal  normal  0.195083 
 
 
-
 
NC_009675  Anae109_3974  short-chain dehydrogenase/reductase SDR  38.32 
 
 
264 aa  132  5e-30  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.036497  normal  0.609933 
 
 
-
 
NC_010117  COXBURSA331_A1015  short chain dehydrogenase/reductase family oxidoreductase  34.02 
 
 
263 aa  132  6.999999999999999e-30  Coxiella burnetii RSA 331  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_3579  short-chain dehydrogenase/reductase SDR  34.36 
 
 
258 aa  132  6.999999999999999e-30  Thermomonospora curvata DSM 43183  Bacteria  normal  0.392131  n/a   
 
 
-
 
NC_009727  CBUD_1145  short chain dehydrogenase  34.02 
 
 
321 aa  131  9e-30  Coxiella burnetii Dugway 5J108-111  Bacteria  normal  n/a   
 
 
-
 
NC_010184  BcerKBAB4_3967  short-chain dehydrogenase/reductase SDR  34.54 
 
 
264 aa  130  2.0000000000000002e-29  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.0321162  n/a   
 
 
-
 
NC_008262  CPR_0344  3-oxoacyl-[acyl-carrier protein] reductase  29.12 
 
 
265 aa  130  2.0000000000000002e-29  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_2585  short chain dehydrogenase/reductase family oxidoreductase  31.15 
 
 
257 aa  130  2.0000000000000002e-29  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>