More than 300 homologs were found in PanDaTox collection
for query gene Sfum_0632 on replicon NC_008554
Organism: Syntrophobacter fumaroxidans MPOB



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008554  Sfum_0632  response regulator receiver protein  100 
 
 
135 aa  270  4.0000000000000004e-72  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_0618  response regulator receiver protein  52.27 
 
 
157 aa  139  9.999999999999999e-33  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_1351  response regulator receiver protein  49.21 
 
 
141 aa  130  6.999999999999999e-30  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000171187  n/a   
 
 
-
 
NC_009943  Dole_1350  response regulator receiver protein  46.34 
 
 
147 aa  125  1.0000000000000001e-28  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00189482  n/a   
 
 
-
 
NC_008554  Sfum_0648  response regulator receiver protein  46.72 
 
 
151 aa  122  1e-27  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_1357  response regulator receiver protein  47.62 
 
 
144 aa  121  4e-27  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.48275  n/a   
 
 
-
 
NC_011769  DvMF_1769  response regulator receiver protein  49.15 
 
 
129 aa  118  3e-26  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_009943  Dole_1361  response regulator receiver protein  50.83 
 
 
147 aa  118  3e-26  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1358  response regulator receiver protein  46.32 
 
 
144 aa  115  1.9999999999999998e-25  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.107991  n/a   
 
 
-
 
NC_008751  Dvul_0407  response regulator receiver protein  50 
 
 
128 aa  115  1.9999999999999998e-25  Desulfovibrio vulgaris DP4  Bacteria  normal  0.627834  normal  0.12665 
 
 
-
 
NC_011769  DvMF_1773  response regulator receiver sensor signal transduction histidine kinase  47.15 
 
 
408 aa  114  5e-25  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_009943  Dole_1352  response regulator receiver protein  46.4 
 
 
139 aa  113  7.999999999999999e-25  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00001959  n/a   
 
 
-
 
NC_008751  Dvul_0403  response regulator receiver sensor signal transduction histidine kinase  44.26 
 
 
374 aa  113  1.0000000000000001e-24  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.150899 
 
 
-
 
NC_013173  Dbac_1807  response regulator receiver protein  43.31 
 
 
139 aa  111  3e-24  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_1988  response regulator receiver protein  47.37 
 
 
119 aa  111  4.0000000000000004e-24  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_009943  Dole_2335  response regulator receiver protein  45.45 
 
 
411 aa  108  2.0000000000000002e-23  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.0000388714  n/a   
 
 
-
 
NC_009483  Gura_3572  two component, sigma-54 specific, Fis family transcriptional regulator  40.5 
 
 
457 aa  108  3e-23  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2037  response regulator receiver protein  49.07 
 
 
120 aa  107  5e-23  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1362  response regulator receiver protein  39.53 
 
 
159 aa  106  1e-22  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2269  response regulator receiver protein  46.61 
 
 
130 aa  105  2e-22  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.740525  n/a   
 
 
-
 
NC_011883  Ddes_0816  response regulator receiver protein  46.22 
 
 
157 aa  105  2e-22  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_0314  response regulator receiver protein  45.3 
 
 
131 aa  104  3e-22  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0234873  n/a   
 
 
-
 
NC_011883  Ddes_1566  response regulator receiver protein  43.33 
 
 
126 aa  104  4e-22  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0654  response regulator receiver protein  43.85 
 
 
413 aa  104  5e-22  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.113697  normal 
 
 
-
 
NC_007519  Dde_0321  response regulator receiver domain-containing protein  44.07 
 
 
122 aa  103  8e-22  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_0173  response regulator receiver protein  43.48 
 
 
121 aa  103  8e-22  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_0313  response regulator receiver protein  43.31 
 
 
143 aa  102  1e-21  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0254543  n/a   
 
 
-
 
NC_009767  Rcas_2795  two component transcriptional regulator  42.02 
 
 
266 aa  102  1e-21  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_2331  response regulator receiver protein  41.67 
 
 
142 aa  102  2e-21  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00000000425244  n/a   
 
 
-
 
NC_011662  Tmz1t_1843  two component, sigma54 specific, transcriptional regulator, Fis family  41.88 
 
 
465 aa  102  2e-21  Thauera sp. MZ1T  Bacteria  normal  0.798265  n/a   
 
 
-
 
NC_008554  Sfum_0657  response regulator receiver protein  47.58 
 
 
143 aa  102  2e-21  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.771795  normal 
 
 
-
 
NC_009523  RoseRS_1088  two component transcriptional regulator  42.02 
 
 
264 aa  101  4e-21  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.237646 
 
 
-
 
NC_011883  Ddes_0018  response regulator receiver protein  44.14 
 
 
135 aa  101  4e-21  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  decreased coverage  0.00000218096  n/a   
 
 
-
 
NC_013173  Dbac_2042  response regulator receiver protein  43.22 
 
 
147 aa  100  6e-21  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_002939  GSU1129  sigma-54 dependent DNA-binding response regulator  42.86 
 
 
453 aa  99.8  1e-20  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_2924  two component, sigma54 specific, Fis family transcriptional regulator  40.16 
 
 
470 aa  99.8  1e-20  Geobacter metallireducens GS-15  Bacteria  normal  0.777319  hitchhiker  0.0000000000564278 
 
 
-
 
NC_009943  Dole_1348  response regulator receiver protein  41.94 
 
 
173 aa  99.8  1e-20  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_011988  Avi_6108  two component response regulator  44.07 
 
 
226 aa  99.8  1e-20  Agrobacterium vitis S4  Bacteria  normal  0.655098  n/a   
 
 
-
 
NC_002939  GSU0598  sigma-54 dependent DNA-binding response regulator  38.71 
 
 
470 aa  99.4  2e-20  Geobacter sulfurreducens PCA  Bacteria  normal  0.885444  n/a   
 
 
-
 
NC_007519  Dde_0328  response regulator receiver domain-containing protein  44.44 
 
 
406 aa  99.4  2e-20  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.918345  n/a   
 
 
-
 
NC_008554  Sfum_0633  response regulator receiver protein  39.52 
 
 
133 aa  99  2e-20  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.546392  normal 
 
 
-
 
NC_011883  Ddes_0853  two component, sigma54 specific, transcriptional regulator, Fis family  41.88 
 
 
459 aa  99  2e-20  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.0538681  n/a   
 
 
-
 
NC_009675  Anae109_1798  two component, sigma54 specific, Fis family transcriptional regulator  38.93 
 
 
466 aa  99  2e-20  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.634231  normal 
 
 
-
 
NC_007404  Tbd_0904  two component Fis family transcriptional regulator  38.93 
 
 
454 aa  98.6  3e-20  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.629928  normal 
 
 
-
 
NC_011146  Gbem_1988  two component, sigma54 specific, transcriptional regulator, Fis family  40 
 
 
509 aa  98.2  3e-20  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_4779  two component, sigma54 specific, transcriptional regulator, Fis family  39.84 
 
 
494 aa  98.2  3e-20  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2741  two component, sigma54 specific, Fis family transcriptional regulator  42.02 
 
 
474 aa  98.2  3e-20  Rhodoferax ferrireducens T118  Bacteria  normal  0.0363909  n/a   
 
 
-
 
NC_010814  Glov_2786  two component, sigma54 specific, transcriptional regulator, Fis family  40.68 
 
 
480 aa  98.6  3e-20  Geobacter lovleyi SZ  Bacteria  normal  0.543097  n/a   
 
 
-
 
NC_009675  Anae109_4152  two component, sigma54 specific, Fis family transcriptional regulator  37.69 
 
 
480 aa  98.2  4e-20  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.038607 
 
 
-
 
NC_008609  Ppro_0435  response regulator receiver protein  40 
 
 
124 aa  97.8  4e-20  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.00876892  n/a   
 
 
-
 
NC_007519  Dde_0695  response regulator receiver domain-containing protein  41.53 
 
 
141 aa  97.4  5e-20  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.396926  n/a   
 
 
-
 
NC_007517  Gmet_2679  response regulator receiver domain-containing protein  40 
 
 
129 aa  97.1  7e-20  Geobacter metallireducens GS-15  Bacteria  normal  0.380915  normal  0.27601 
 
 
-
 
NC_008751  Dvul_0168  two component, sigma54 specific, Fis family transcriptional regulator  40.32 
 
 
459 aa  97.1  8e-20  Desulfovibrio vulgaris DP4  Bacteria  normal  0.564625  normal  0.730975 
 
 
-
 
NC_011769  DvMF_0700  two component, sigma54 specific, transcriptional regulator, Fis family  38.81 
 
 
448 aa  97.1  8e-20  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.219431 
 
 
-
 
NC_009943  Dole_2739  two component, sigma54 specific, Fis family transcriptional regulator  39.82 
 
 
451 aa  96.7  9e-20  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.693002  n/a   
 
 
-
 
NC_013173  Dbac_2272  response regulator receiver sensor signal transduction histidine kinase  42.86 
 
 
382 aa  96.3  1e-19  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.275022  n/a   
 
 
-
 
NC_011369  Rleg2_3341  two component transcriptional regulator, winged helix family  43.24 
 
 
225 aa  96.3  1e-19  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.219699 
 
 
-
 
NC_008554  Sfum_0620  response regulator receiver protein  40.32 
 
 
142 aa  96.3  1e-19  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_1360  response regulator receiver sensor signal transduction histidine kinase  43.75 
 
 
403 aa  96.7  1e-19  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_2334  response regulator receiver protein  42.74 
 
 
151 aa  95.9  2e-19  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_011080  SNSL254_A4507  transcriptional regulatory protein ZraR  40.98 
 
 
441 aa  95.5  2e-19  Salmonella enterica subsp. enterica serovar Newport str. SL254  Bacteria  normal  normal  0.0570238 
 
 
-
 
NC_007498  Pcar_0259  two component signal transduction response regulator  39.13 
 
 
513 aa  95.9  2e-19  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_1869  two component, sigma54 specific, transcriptional regulator, Fis family  38.17 
 
 
464 aa  95.5  2e-19  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2984  two component, sigma54 specific, transcriptional regulator, Fis family  37.98 
 
 
458 aa  95.5  2e-19  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.826768  n/a   
 
 
-
 
NC_008554  Sfum_3268  two component, sigma54 specific, Fis family transcriptional regulator  38.89 
 
 
483 aa  95.9  2e-19  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.474695  normal 
 
 
-
 
NC_008609  Ppro_3079  two component, sigma54 specific, Fis family transcriptional regulator  39.02 
 
 
480 aa  95.9  2e-19  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.00177638  n/a   
 
 
-
 
CP001637  EcDH1_3989  two component, sigma54 specific, transcriptional regulator, Fis family  38.46 
 
 
441 aa  94.7  3e-19  Escherichia coli DH1  Bacteria  normal  0.716922  n/a   
 
 
-
 
NC_010658  SbBS512_E4497  transcriptional regulatory protein ZraR  38.46 
 
 
441 aa  95.1  3e-19  Shigella boydii CDC 3083-94  Bacteria  hitchhiker  0.0000279415  n/a   
 
 
-
 
NC_009801  EcE24377A_4549  transcriptional regulatory protein ZraR  38.46 
 
 
441 aa  94.7  3e-19  Escherichia coli E24377A  Bacteria  hitchhiker  0.000369022  n/a   
 
 
-
 
NC_011094  SeSA_A4385  transcriptional regulatory protein ZraR  40.98 
 
 
441 aa  95.1  3e-19  Salmonella enterica subsp. enterica serovar Schwarzengrund str. CVM19633  Bacteria  normal  normal  0.712665 
 
 
-
 
NC_010498  EcSMS35_4454  transcriptional regulatory protein ZraR  38.46 
 
 
441 aa  94.7  3e-19  Escherichia coli SMS-3-5  Bacteria  normal  0.209341  hitchhiker  0.000519331 
 
 
-
 
NC_007519  Dde_0692  response regulator receiver domain-containing protein  38.46 
 
 
145 aa  95.1  3e-19  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  decreased coverage  0.000176776  n/a   
 
 
-
 
NC_009800  EcHS_A4238  transcriptional regulatory protein ZraR  38.46 
 
 
441 aa  95.1  3e-19  Escherichia coli HS  Bacteria  normal  0.020936  n/a   
 
 
-
 
NC_011205  SeD_A4581  transcriptional regulatory protein ZraR  40.98 
 
 
441 aa  95.1  3e-19  Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU1117  response regulator  41.82 
 
 
127 aa  94.7  4e-19  Geobacter sulfurreducens PCA  Bacteria  normal  n/a   
 
 
-
 
CP001509  ECD_03881  fused DNA-binding response regulator in two-component regulatory system with ZraS: response regulator/sigma54 interaction protein  38.46 
 
 
441 aa  94.4  5e-19  Escherichia coli BL21(DE3)  Bacteria  normal  0.0124745  n/a   
 
 
-
 
NC_009253  Dred_1510  two component, sigma54 specific, Fis family transcriptional regulator  42.11 
 
 
448 aa  94.4  5e-19  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_007498  Pcar_1960  response regulator transcription factor  37.29 
 
 
471 aa  94.4  5e-19  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_010468  EcolC_4021  transcriptional regulatory protein ZraR  38.46 
 
 
441 aa  94.4  5e-19  Escherichia coli ATCC 8739  Bacteria  normal  0.0128092  normal  0.0227655 
 
 
-
 
NC_012892  B21_03834  hypothetical protein  38.46 
 
 
441 aa  94.4  5e-19  Escherichia coli BL21  Bacteria  normal  0.0118236  n/a   
 
 
-
 
NC_010571  Oter_1278  two component, sigma54 specific, Fis family transcriptional regulator  37.93 
 
 
452 aa  94.4  5e-19  Opitutus terrae PB90-1  Bacteria  normal  0.902353  normal 
 
 
-
 
NC_012850  Rleg_3643  two component transcriptional regulator, winged helix family  43.24 
 
 
225 aa  94.4  5e-19  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_3443  response regulator receiver protein  38.53 
 
 
223 aa  94.4  5e-19  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_007517  Gmet_0812  two component, sigma54 specific, Fis family transcriptional regulator  39.17 
 
 
453 aa  94  6e-19  Geobacter metallireducens GS-15  Bacteria  normal  0.0257022  hitchhiker  0.00000328811 
 
 
-
 
NC_013385  Adeg_0173  two component, sigma54 specific, transcriptional regulator, Fis family  40.74 
 
 
463 aa  94  6e-19  Ammonifex degensii KC4  Bacteria  normal  0.127235  n/a   
 
 
-
 
NC_012918  GM21_2553  response regulator receiver protein  41.44 
 
 
126 aa  94  6e-19  Geobacter sp. M21  Bacteria  n/a    hitchhiker  2.1194499999999997e-20 
 
 
-
 
NC_009483  Gura_3647  two component, sigma-54 specific, Fis family transcriptional regulator  38.71 
 
 
471 aa  94  6e-19  Geobacter uraniireducens Rf4  Bacteria  normal  0.0209004  n/a   
 
 
-
 
NC_011149  SeAg_B4418  transcriptional regulatory protein ZraR  40.16 
 
 
441 aa  94  6e-19  Salmonella enterica subsp. enterica serovar Agona str. SL483  Bacteria  normal  0.298897  n/a   
 
 
-
 
NC_011146  Gbem_1660  response regulator receiver protein  41.44 
 
 
126 aa  94  6e-19  Geobacter bemidjiensis Bem  Bacteria  normal  n/a   
 
 
-
 
NC_009483  Gura_0495  two component, sigma-54 specific, Fis family transcriptional regulator  41.53 
 
 
456 aa  94  7e-19  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_007908  Rfer_2737  response regulator receiver domain-containing protein  43.12 
 
 
139 aa  94  7e-19  Rhodoferax ferrireducens T118  Bacteria  hitchhiker  0.00154696  n/a   
 
 
-
 
NC_009675  Anae109_3581  two component, sigma54 specific, Fis family transcriptional regulator  37.3 
 
 
490 aa  94  7e-19  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal  0.0374719 
 
 
-
 
NC_007760  Adeh_2009  two component, sigma54 specific, Fis family transcriptional regulator  37.4 
 
 
463 aa  93.6  8e-19  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_1954  two component, sigma54 specific, transcriptional regulator, Fis family  38.17 
 
 
464 aa  93.6  8e-19  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.611403  n/a   
 
 
-
 
NC_011083  SeHA_C4505  transcriptional regulatory protein ZraR  40.16 
 
 
441 aa  93.6  9e-19  Salmonella enterica subsp. enterica serovar Heidelberg str. SL476  Bacteria  normal  normal  0.11324 
 
 
-
 
NC_011353  ECH74115_5475  transcriptional regulatory protein ZraR  41.59 
 
 
441 aa  93.6  9e-19  Escherichia coli O157:H7 str. EC4115  Bacteria  normal  normal 
 
 
-
 
NC_002939  GSU1658  response regulator/GGDEF domain-containing protein  39.02 
 
 
458 aa  93.2  1e-18  Geobacter sulfurreducens PCA  Bacteria  normal  0.939598  n/a   
 
 
-
 
NC_007760  Adeh_0417  two component, sigma54 specific, Fis family transcriptional regulator  36.51 
 
 
474 aa  92.8  1e-18  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.45134  n/a   
 
 
-
 
NC_008609  Ppro_1179  two component, sigma54 specific, Fis family transcriptional regulator  38.33 
 
 
457 aa  92.8  1e-18  Pelobacter propionicus DSM 2379  Bacteria  normal  0.655382  n/a   
 
 
-
 
NC_008686  Pden_0310  two component transcriptional regulator  44.07 
 
 
223 aa  92.8  1e-18  Paracoccus denitrificans PD1222  Bacteria  normal  normal  0.859655 
 
 
-
 
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