Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_3268 |
Symbol | |
ID | 4458401 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 4002575 |
End bp | 4004026 |
Gene Length | 1452 bp |
Protein Length | 483 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 639704040 |
Product | two component, sigma54 specific, Fis family transcriptional regulator |
Protein accession | YP_847376 |
Protein GI | 116750689 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.474695 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGAAAGA TGGATAAGAT ATTGATCGTT GACGACGACG AGGGCCTCGT TCACTTCCTT ACCCGTTTCT TTTCCAGGAA GGAATACGAA GTGCTCTCGT GCAACAGCGG AACGGCGGCC TTGGAGGCGG TGGGACGCGA ACCCTTCGAC CTGATTCTCC TCGATTACAA GATGCCGGGC AAGAACGGGC TCGAAACCCT CAAGGAGATC CGGCGCCTGC AGGTGAAAAC GCCCATCATC GTGATGACTG CCTACGGCAC CATGGACACG GCCATCGAAG CCATGAAGCT CGGAGCGTAC GACTATCTCC TCAAGCCTTT CGACAGGAAC GGGCTGGAGC GCATTGCCAG GGATGCCCTC GAGGTGAACC GCCTCATGAA GGAGGTGGTG AGCTTTCCGG CCCACAGCCT CACATCCGCC CGGGTTCCAA AGGGAGAAAT CAAGATCATC GGCAATCACA CTCGAATGCA GGAGGTCTAT AAGCTCATCG GGCAGGTCGC AAACAAGGAC GTCACGGTGC TCATCACCGG AGAATCCGGC ACGGGGAAGG AACTGGTCGC CCGGGCCCTC TATCACCATA GTGACCGAAA AAACAAGCCG TTTCTCGGGG TCAACTGTGC CGCCATCCCG GAGACGCTTT TCGAGAGCGA GCTTTTTGGC TACGAACGCG GGGCCTTCAC GGGTGCCGAG CGCACTCACA TCGGCAAGTT TGAAAGATGC CACGGCGGCA CGCTGTTCTT CGATGAAATC GCCGAGATGC CTCTTTCCAC GCAGGCCAAG CTTCTCCGTG CGCTCCAATA CGGGGAGATC GAACGGGTCG GCGCCGAACA GCCCCTGAAG GTGGACGTCA GGGTCCTCGT GGCAACGAAC AAGAACCTCG AAAGAGCGGT CGAACAAGGC AGATTCAGGG AAGATCTCTA CTGGAGGCTC AAAATCATCT CCATCCATCT GCCGCCGTTG CGGGAACGCC CGGAAGACAT CCCGGCCCTG GTCGATTATT TCCTGGTCCG TTTTGGAGAG GAGTACAAGT CCCCGATTCG ACGTATCGAA GACGGTGCCC TTGCGAAGCT GAAGTCCCAT GCCTGGCCGG GAAACGTGAG AGAGCTCGAG AACACCGTCA GGCGCGCGGT CGTGCTCTCT TCGGGCGACG TCATCCGCGA GGAACATCTC CGGTTCGACT CCGGCGGCCA TGAACCGTCG TCGCCTGAAT GGGACAAAAA CCCATGGGCG AGGGTGGAAC GAAAGCTCGA GGAGCTGATC CCGGACCTGC TGCAGGTCGG GGGTGAAGCG ATGCATGAGA GCATCATCGA TATGGTTGAG AGAATCCTGT TGTCCAAAGT CCTCGAACAG TGCGGCAACA ACCAGGTCAA AGCCGCGAGA GTGCTTGGCG TCAGCCGCAA TACACTCAGG CACCGCATGA AGAAATTCGA TTTTCTGCCG CCTTCGGAGT GA
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Protein sequence | MRKMDKILIV DDDEGLVHFL TRFFSRKEYE VLSCNSGTAA LEAVGREPFD LILLDYKMPG KNGLETLKEI RRLQVKTPII VMTAYGTMDT AIEAMKLGAY DYLLKPFDRN GLERIARDAL EVNRLMKEVV SFPAHSLTSA RVPKGEIKII GNHTRMQEVY KLIGQVANKD VTVLITGESG TGKELVARAL YHHSDRKNKP FLGVNCAAIP ETLFESELFG YERGAFTGAE RTHIGKFERC HGGTLFFDEI AEMPLSTQAK LLRALQYGEI ERVGAEQPLK VDVRVLVATN KNLERAVEQG RFREDLYWRL KIISIHLPPL RERPEDIPAL VDYFLVRFGE EYKSPIRRIE DGALAKLKSH AWPGNVRELE NTVRRAVVLS SGDVIREEHL RFDSGGHEPS SPEWDKNPWA RVERKLEELI PDLLQVGGEA MHESIIDMVE RILLSKVLEQ CGNNQVKAAR VLGVSRNTLR HRMKKFDFLP PSE
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