More than 300 homologs were found in PanDaTox collection
for query gene Namu_2610 on replicon NC_013235
Organism: Nakamurella multipartita DSM 44233



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013235  Namu_2610  two component transcriptional regulator, LuxR family  100 
 
 		 144 aa  278  1e-74  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.00000438854  normal  0.0112001 
 
 
-
 
NC_013946  Mrub_1264  two component LuxR family transcriptional regulator  70.83 
 
 		 200 aa  198  1.9999999999999998e-50  Meiothermus ruber DSM 1279  Bacteria  normal  1  normal  0.86401 
 
 
-
 
NC_008025  Dgeo_0183  two component LuxR family transcriptional regulator  68.75 
 
 		 200 aa  186  9e-47  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.541303  normal  0.654013 
 
 
-
 
NC_013159  Svir_02200  two component transcriptional regulator, LuxR family  65.28 
 
 		 208 aa  179  9.000000000000001e-45  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011071  Smal_0258  two component transcriptional regulator, LuxR family  61.81 
 
 		 200 aa  175  2e-43  Stenotrophomonas maltophilia R551-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009052  Sbal_0347  two component LuxR family transcriptional regulator  59.72 
 
 		 198 aa  173  6e-43  Shewanella baltica OS155  Bacteria  normal  1  n/a   
 
 
-
 
NC_009665  Shew185_0345  two component LuxR family transcriptional regulator  59.72 
 
 		 198 aa  173  6e-43  Shewanella baltica OS185  Bacteria  normal  1  n/a   
 
 
-
 
NC_009997  Sbal195_0352  two component LuxR family transcriptional regulator  59.72 
 
 		 198 aa  173  7e-43  Shewanella baltica OS195  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008345  Sfri_0357  two component transcriptional regulator, LuxR family protein  57.64 
 
 		 202 aa  172  9.999999999999999e-43  Shewanella frigidimarina NCIMB 400  Bacteria  normal  1  n/a   
 
 
-
 
NC_011663  Sbal223_0355  two component transcriptional regulator, LuxR family  59.03 
 
 		 198 aa  172  1.9999999999999998e-42  Shewanella baltica OS223  Bacteria  normal  0.881439  hitchhiker  0.0000000668977 
 
 
-
 
NC_004347  SO_0351  LuxR family DNA-binding response regulator  57.64 
 
 		 198 aa  171  3.9999999999999995e-42  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008322  Shewmr7_0322  two component LuxR family transcriptional regulator  57.64 
 
 		 198 aa  167  3e-41  Shewanella sp. MR-7  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008321  Shewmr4_3621  two component LuxR family transcriptional regulator  57.64 
 
 		 198 aa  167  4e-41  Shewanella sp. MR-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008577  Shewana3_3818  two component LuxR family transcriptional regulator  57.64 
 
 		 198 aa  167  4e-41  Shewanella sp. ANA-3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009092  Shew_3506  two component LuxR family transcriptional regulator  57.64 
 
 		 198 aa  167  6e-41  Shewanella loihica PV-4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010506  Swoo_4591  two component LuxR family transcriptional regulator  55.56 
 
 		 198 aa  165  2e-40  Shewanella woodyi ATCC 51908  Bacteria  normal  1  unclonable  0.00000001788 
 
 
-
 
NC_011365  Gdia_1908  two component transcriptional regulator, LuxR family  62.76 
 
 		 201 aa  163  5.9999999999999996e-40  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  1  normal  0.264232 
 
 
-
 
NC_009674  Bcer98_3871  two component LuxR family transcriptional regulator  54.17 
 
 		 200 aa  159  1e-38  Bacillus cytotoxicus NVH 391-98  Bacteria  hitchhiker  0.00685623  n/a   
 
 
-
 
NC_008347  Mmar10_2543  two component LuxR family transcriptional regulator  59.03 
 
 		 202 aa  158  3e-38  Maricaulis maris MCS10  Bacteria  normal  0.446643  normal  1 
 
 
-
 
NC_011772  BCG9842_B5477  DNA-binding response regulator  54.17 
 
 		 200 aa  157  7e-38  Bacillus cereus G9842  Bacteria  hitchhiker  0.00156963  hitchhiker  0.00000000000102018 
 
 
-
 
NC_007954  Sden_3475  response regulator receiver  56.76 
 
 		 207 aa  155  2e-37  Shewanella denitrificans OS217  Bacteria  normal  1  n/a   
 
 
-
 
NC_014165  Tbis_1720  LuxR family two component transcriptional regulator  62.76 
 
 		 201 aa  153  9e-37  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011725  BCB4264_A5475  DNA-binding response regulator  52.78 
 
 		 200 aa  152  2e-36  Bacillus cereus B4264  Bacteria  normal  0.132453  n/a   
 
 
-
 
NC_010184  BcerKBAB4_5150  two component LuxR family transcriptional regulator  52.08 
 
 		 200 aa  152  2e-36  Bacillus weihenstephanensis KBAB4  Bacteria  normal  1  n/a   
 
 
-
 
NC_011658  BCAH187_A5531  DNA-binding response regulator  51.39 
 
 		 200 aa  151  2e-36  Bacillus cereus AH187  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_4055  response regulator receiver protein  60.69 
 
 		 201 aa  152  2e-36  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.0367887 
 
 
-
 
NC_006274  BCZK5050  DNA-binding response regulator  51.39 
 
 		 200 aa  151  2.9999999999999998e-36  Bacillus cereus E33L  Bacteria  normal  1  n/a   
 
 
-
 
NC_005945  BAS5200  DNA-binding response regulator  51.39 
 
 		 200 aa  150  5e-36  Bacillus anthracis str. Sterne  Bacteria  normal  1  n/a   
 
 
-
 
NC_005957  BT9727_5034  DNA-binding response regulator  51.39 
 
 		 200 aa  150  5e-36  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.617082  n/a   
 
 
-
 
NC_007530  GBAA_5597  DNA-binding response regulator  51.39 
 
 		 200 aa  150  5e-36  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  1  n/a   
 
 
-
 
NC_011773  BCAH820_5444  DNA-binding response regulator  51.39 
 
 		 200 aa  150  5e-36  Bacillus cereus AH820  Bacteria  n/a    normal  1 
 
 
-
 
NC_003909  BCE_5482  DNA-binding response regulator  50.69 
 
 		 200 aa  150  5.9999999999999996e-36  Bacillus cereus ATCC 10987  Bacteria  normal  1  n/a   
 
 
-
 
NC_007912  Sde_3820  two component LuxR family transcriptional regulator  56.55 
 
 		 205 aa  150  5.9999999999999996e-36  Saccharophagus degradans 2-40  Bacteria  normal  0.113202  normal  1 
 
 
-
 
NC_013947  Snas_2068  two component transcriptional regulator, LuxR family  56.55 
 
 		 212 aa  149  1e-35  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.385073  normal  0.894995 
 
 
-
 
NC_007333  Tfu_0288  LuxR response regulator receiver  59.31 
 
 		 201 aa  149  2e-35  Thermobifida fusca YX  Bacteria  normal  0.0935286  n/a   
 
 
-
 
NC_014165  Tbis_0907  LuxR family two component transcriptional regulator  58.9 
 
 		 197 aa  146  8e-35  Thermobispora bispora DSM 43833  Bacteria  normal  0.365102  normal  1 
 
 
-
 
NC_014211  Ndas_5200  two component transcriptional regulator, LuxR family  58.62 
 
 		 223 aa  146  1.0000000000000001e-34  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0156716  normal  0.415255 
 
 
-
 
NC_011138  MADE_03365  DNA-binding response regulator, LuxR family protein  48.61 
 
 		 205 aa  144  5e-34  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  1  n/a   
 
 
-
 
NC_014158  Tpau_3534  two component transcriptional regulator, LuxR family  56.55 
 
 		 206 aa  144  5e-34  Tsukamurella paurometabola DSM 20162  Bacteria  normal  1  n/a   
 
 
-
 
NC_013131  Caci_0763  two component transcriptional regulator, LuxR family  55.86 
 
 		 208 aa  143  6e-34  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  0.313515 
 
 
-
 
NC_013739  Cwoe_4753  two component transcriptional regulator, LuxR family  57.24 
 
 		 201 aa  137  3.9999999999999997e-32  Conexibacter woesei DSM 14684  Bacteria  normal  1  normal  0.226774 
 
 
-
 
NC_013510  Tcur_2957  two component transcriptional regulator, LuxR family  55.86 
 
 		 201 aa  135  1e-31  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00144362  n/a   
 
 
-
 
NC_013205  Aaci_0655  two component transcriptional regulator, LuxR family  52.78 
 
 		 200 aa  135  2e-31  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  1  n/a   
 
 
-
 
NC_012669  Bcav_0286  two component transcriptional regulator, LuxR family  54.79 
 
 		 203 aa  133  9e-31  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.784033  normal  0.130384 
 
 
-
 
NC_013757  Gobs_1641  two component transcriptional regulator, LuxR family  55.86 
 
 		 201 aa  132  1.9999999999999998e-30  Geodermatophilus obscurus DSM 43160  Bacteria  normal  1  n/a   
 
 
-
 
NC_013235  Namu_3006  two component transcriptional regulator, LuxR family  53.79 
 
 		 204 aa  132  1.9999999999999998e-30  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.000248543  hitchhiker  0.000146029 
 
 
-
 
NC_013595  Sros_1680  response regulator receiver protein  53.42 
 
 		 197 aa  130  3.9999999999999996e-30  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.516841 
 
 
-
 
NC_013172  Bfae_06340  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  54.4 
 
 		 211 aa  130  7.999999999999999e-30  Brachybacterium faecium DSM 4810  Bacteria  normal  1  n/a   
 
 
-
 
NC_013169  Ksed_00990  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  51.03 
 
 		 201 aa  129  1.0000000000000001e-29  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.666199  normal  1 
 
 
-
 
NC_013174  Jden_0118  two component transcriptional regulator, LuxR family  47.59 
 
 		 205 aa  129  2.0000000000000002e-29  Jonesia denitrificans DSM 20603  Bacteria  normal  0.137239  normal  0.184056 
 
 
-
 
NC_008532  STER_1290  DNA-binding response regulator  46.53 
 
 		 200 aa  127  5.0000000000000004e-29  Streptococcus thermophilus LMD-9  Bacteria  normal  0.29796  n/a   
 
 
-
 
NC_013595  Sros_4334  response regulator receiver protein  53.79 
 
 		 200 aa  127  6e-29  Streptosporangium roseum DSM 43021  Bacteria  normal  0.574495  normal  0.636855 
 
 
-
 
NC_012669  Bcav_1588  two component transcriptional regulator, LuxR family  52.41 
 
 		 201 aa  126  8.000000000000001e-29  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.117504  normal  1 
 
 
-
 
NC_008578  Acel_0195  two component LuxR family transcriptional regulator  57.24 
 
 		 205 aa  125  2.0000000000000002e-28  Acidothermus cellulolyticus 11B  Bacteria  normal  1  normal  0.116105 
 
 
-
 
NC_013521  Sked_03860  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  49.66 
 
 		 204 aa  124  6e-28  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0649288  normal  0.281143 
 
 
-
 
NC_013757  Gobs_4836  two component transcriptional regulator, LuxR family  51.72 
 
 		 201 aa  123  1e-27  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.16538  n/a   
 
 
-
 
NC_013131  Caci_1897  two component transcriptional regulator, LuxR family  50.34 
 
 		 200 aa  121  2e-27  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.299419  normal  1 
 
 
-
 
NC_012803  Mlut_16250  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  51.03 
 
 		 224 aa  121  3e-27  Micrococcus luteus NCTC 2665  Bacteria  normal  0.216822  n/a   
 
 
-
 
NC_009921  Franean1_0528  two component LuxR family transcriptional regulator  53.42 
 
 		 201 aa  120  5e-27  Frankia sp. EAN1pec  Bacteria  normal  0.653057  normal  1 
 
 
-
 
NC_002976  SERP0889  LuxR family DNA-binding response regulator  38.89 
 
 		 200 aa  119  1.9999999999999998e-26  Staphylococcus epidermidis RP62A  Bacteria  hitchhiker  0.0000916195  n/a   
 
 
-
 
NC_013131  Caci_0691  two component transcriptional regulator, LuxR family  51.7 
 
 		 190 aa  119  1.9999999999999998e-26  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013947  Snas_0503  two component transcriptional regulator, LuxR family  50.34 
 
 		 202 aa  118  1.9999999999999998e-26  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  0.900292 
 
 
-
 
NC_013595  Sros_6441  response regulator receiver protein  49.66 
 
 		 227 aa  118  3e-26  Streptosporangium roseum DSM 43021  Bacteria  normal  0.176234  normal  0.0893652 
 
 
-
 
NC_013595  Sros_4598  response regulator receiver protein  47.59 
 
 		 201 aa  117  7e-26  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.053163 
 
 
-
 
NC_009487  SaurJH9_1383  two component LuxR family transcriptional regulator  39.58 
 
 		 200 aa  117  7e-26  Staphylococcus aureus subsp. aureus JH9  Bacteria  hitchhiker  0.00000320378  n/a   
 
 
-
 
NC_009632  SaurJH1_1410  response regulator receiver  39.58 
 
 		 200 aa  117  7e-26  Staphylococcus aureus subsp. aureus JH1  Bacteria  hitchhiker  0.000440417  n/a   
 
 
-
 
NC_013131  Caci_3654  two component transcriptional regulator, LuxR family  49.66 
 
 		 201 aa  116  9.999999999999999e-26  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  0.0345388 
 
 
-
 
NC_013093  Amir_1937  two component transcriptional regulator, LuxR family  51.72 
 
 		 201 aa  116  9.999999999999999e-26  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_8146  response regulator receiver protein  52.03 
 
 		 202 aa  116  9.999999999999999e-26  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.524184 
 
 
-
 
NC_013521  Sked_06600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  50.34 
 
 		 200 aa  115  3e-25  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.680692  normal  1 
 
 
-
 
NC_013510  Tcur_1624  two component transcriptional regulator, LuxR family  51.72 
 
 		 201 aa  114  3.9999999999999997e-25  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0305603  n/a   
 
 
-
 
NC_014210  Ndas_1079  two component transcriptional regulator, LuxR family  47.59 
 
 		 200 aa  114  6e-25  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.782019  normal  0.0499592 
 
 
-
 
NC_014210  Ndas_1808  two component transcriptional regulator, LuxR family  52.03 
 
 		 201 aa  112  1.0000000000000001e-24  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  0.207018 
 
 
-
 
NC_013739  Cwoe_5628  two component transcriptional regulator, LuxR family  50.68 
 
 		 200 aa  112  1.0000000000000001e-24  Conexibacter woesei DSM 14684  Bacteria  normal  0.946433  normal  0.876589 
 
 
-
 
NC_013510  Tcur_2770  two component transcriptional regulator, LuxR family  46.21 
 
 		 201 aa  110  5e-24  Thermomonospora curvata DSM 43183  Bacteria  normal  0.282039  n/a   
 
 
-
 
NC_013947  Snas_4572  two component transcriptional regulator, LuxR family  51.72 
 
 		 200 aa  110  6e-24  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.318618  normal  0.115695 
 
 
-
 
NC_013595  Sros_0091  response regulator receiver protein  48.63 
 
 		 204 aa  110  6e-24  Streptosporangium roseum DSM 43021  Bacteria  normal  0.520551  normal  1 
 
 
-
 
NC_013159  Svir_11510  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  47.26 
 
 		 203 aa  108  2.0000000000000002e-23  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.575058  normal  1 
 
 
-
 
NC_009523  RoseRS_4258  two component LuxR family transcriptional regulator  46.62 
 
 		 216 aa  107  5e-23  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012669  Bcav_0588  two component transcriptional regulator, LuxR family  48.28 
 
 		 204 aa  105  3e-22  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal  1 
 
 
-
 
NC_008148  Rxyl_1550  two component LuxR family transcriptional regulator  42.41 
 
 		 220 aa  104  4e-22  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_013947  Snas_5262  two component transcriptional regulator, LuxR family  41.72 
 
 		 219 aa  104  5e-22  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013093  Amir_5893  two component transcriptional regulator, LuxR family  41.14 
 
 		 218 aa  103  7e-22  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_6161  response regulator receiver protein  41.4 
 
 		 221 aa  100  9e-21  Streptosporangium roseum DSM 43021  Bacteria  normal  0.902987  decreased coverage  0.000109123 
 
 
-
 
NC_007760  Adeh_1997  two component LuxR family transcriptional regulator  37.42 
 
 		 218 aa  99.8  1e-20  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_2445  response regulator receiver protein  42.41 
 
 		 218 aa  99  2e-20  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0115114  normal  0.02149 
 
 
-
 
NC_011891  A2cp1_1966  two component transcriptional regulator, LuxR family  36.77 
 
 		 218 aa  99  2e-20  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011145  AnaeK_1881  two component transcriptional regulator, LuxR family  36.77 
 
 		 218 aa  99  2e-20  Anaeromyxobacter sp. K  Bacteria  normal  0.0160211  n/a   
 
 
-
 
NC_010001  Cphy_3936  two component LuxR family transcriptional regulator  35.53 
 
 		 213 aa  99.4  2e-20  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.00507176  n/a   
 
 
-
 
NC_008148  Rxyl_2613  two component LuxR family transcriptional regulator  43.92 
 
 		 207 aa  97.8  4e-20  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  1  n/a   
 
 
-
 
NC_013552  DhcVS_601  DNA-binding response regulator, LuxR family  34.39 
 
 		 224 aa  97.1  7e-20  Dehalococcoides sp. VS  Bacteria  normal  1  n/a   
 
 
-
 
NC_010717  PXO_04459  two-component system regulatory protein  39.87 
 
 		 213 aa  97.1  8e-20  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  1  n/a   
 
 
-
 
NC_014210  Ndas_0782  two component transcriptional regulator, LuxR family  40.88 
 
 		 220 aa  96.3  1e-19  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009338  Mflv_5014  two component LuxR family transcriptional regulator  38.78 
 
 		 209 aa  96.3  1e-19  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.103708  normal  0.29037 
 
 
-
 
NC_009455  DehaBAV1_0632  two component LuxR family transcriptional regulator  33.76 
 
 		 224 aa  96.3  1e-19  Dehalococcoides sp. BAV1  Bacteria  hitchhiker  0.00385785  n/a   
 
 
-
 
NC_013093  Amir_2232  two component transcriptional regulator, LuxR family  41.67 
 
 		 302 aa  95.5  2e-19  Actinosynnema mirum DSM 43827  Bacteria  normal  0.501029  n/a   
 
 
-
 
NC_013947  Snas_4479  two component transcriptional regulator, LuxR family  39.62 
 
 		 224 aa  95.9  2e-19  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.518456  normal  0.598935 
 
 
-
 
NC_013595  Sros_1910  response regulator receiver protein  42.14 
 
 		 226 aa  95.9  2e-19  Streptosporangium roseum DSM 43021  Bacteria  normal  0.238062  normal  0.36963 
 
 
-
 
NC_013510  Tcur_4551  two component transcriptional regulator, LuxR family  42.14 
 
 		 220 aa  95.5  2e-19  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_013093  Amir_1617  two component transcriptional regulator, LuxR family  42.21 
 
 		 214 aa  95.5  2e-19  Actinosynnema mirum DSM 43827  Bacteria  normal  0.321528  n/a   
 
 
-
 
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