More than 300 homologs were found in PanDaTox collection
for query gene Ddes_1566 on replicon NC_011883
Organism: Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011883  Ddes_1566  response regulator receiver protein  100 
 
 
126 aa  253  4e-67  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_0173  response regulator receiver protein  60.98 
 
 
121 aa  150  5e-36  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_011769  DvMF_1988  response regulator receiver protein  60.8 
 
 
119 aa  148  2e-35  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_008554  Sfum_0648  response regulator receiver protein  48.39 
 
 
151 aa  123  1e-27  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_1807  response regulator receiver protein  47.11 
 
 
139 aa  116  9.999999999999999e-26  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1357  response regulator receiver protein  46.28 
 
 
144 aa  112  2.0000000000000002e-24  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.48275  n/a   
 
 
-
 
NC_008554  Sfum_0618  response regulator receiver protein  45.45 
 
 
157 aa  108  2.0000000000000002e-23  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_1352  response regulator receiver protein  43.44 
 
 
139 aa  106  9.000000000000001e-23  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00001959  n/a   
 
 
-
 
NC_011883  Ddes_0018  response regulator receiver protein  44.17 
 
 
135 aa  105  2e-22  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  decreased coverage  0.00000218096  n/a   
 
 
-
 
NC_009943  Dole_1361  response regulator receiver protein  43.44 
 
 
147 aa  105  2e-22  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1350  response regulator receiver protein  41.27 
 
 
147 aa  105  3e-22  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00189482  n/a   
 
 
-
 
NC_008554  Sfum_0632  response regulator receiver protein  43.33 
 
 
135 aa  104  4e-22  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_013173  Dbac_0313  response regulator receiver protein  46.22 
 
 
143 aa  104  5e-22  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0254543  n/a   
 
 
-
 
NC_013173  Dbac_2042  response regulator receiver protein  42.62 
 
 
147 aa  103  7e-22  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_1351  response regulator receiver protein  46.22 
 
 
141 aa  103  7e-22  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.000171187  n/a   
 
 
-
 
NC_011769  DvMF_1769  response regulator receiver protein  43.2 
 
 
129 aa  103  1e-21  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_007519  Dde_0321  response regulator receiver domain-containing protein  43.2 
 
 
122 aa  102  1e-21  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_008751  Dvul_0407  response regulator receiver protein  43.8 
 
 
128 aa  102  2e-21  Desulfovibrio vulgaris DP4  Bacteria  normal  0.627834  normal  0.12665 
 
 
-
 
NC_013173  Dbac_0314  response regulator receiver protein  45.76 
 
 
131 aa  101  3e-21  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.0234873  n/a   
 
 
-
 
NC_011769  DvMF_1991  response regulator receiver protein  46.67 
 
 
153 aa  101  3e-21  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_009943  Dole_2331  response regulator receiver protein  41.67 
 
 
142 aa  101  4e-21  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.00000000425244  n/a   
 
 
-
 
NC_013173  Dbac_2037  response regulator receiver protein  45.54 
 
 
120 aa  100  8e-21  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_011830  Dhaf_4779  two component, sigma54 specific, transcriptional regulator, Fis family  38.84 
 
 
494 aa  98.6  3e-20  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_0324  response regulator receiver domain-containing protein  44.74 
 
 
127 aa  97.1  7e-20  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.581793  n/a   
 
 
-
 
NC_009943  Dole_1360  response regulator receiver sensor signal transduction histidine kinase  43.1 
 
 
403 aa  96.3  1e-19  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_011769  DvMF_1773  response regulator receiver sensor signal transduction histidine kinase  42.15 
 
 
408 aa  96.3  1e-19  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_008554  Sfum_0633  response regulator receiver protein  41.32 
 
 
133 aa  94.4  5e-19  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.546392  normal 
 
 
-
 
NC_008751  Dvul_0150  response regulator receiver protein  44.8 
 
 
134 aa  94.4  5e-19  Desulfovibrio vulgaris DP4  Bacteria  normal  0.89872  normal  0.680282 
 
 
-
 
NC_011883  Ddes_0816  response regulator receiver protein  38.71 
 
 
157 aa  92.8  1e-18  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_5311  two component transcriptional regulator  41.27 
 
 
246 aa  93.2  1e-18  Frankia sp. EAN1pec  Bacteria  normal  0.554395  normal  0.310406 
 
 
-
 
NC_011769  DvMF_1993  two component, sigma54 specific, transcriptional regulator, Fis family  39.67 
 
 
486 aa  93.2  1e-18  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_008554  Sfum_0654  response regulator receiver protein  42.62 
 
 
413 aa  93.2  1e-18  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.113697  normal 
 
 
-
 
NC_009483  Gura_3572  two component, sigma-54 specific, Fis family transcriptional regulator  40 
 
 
457 aa  93.2  1e-18  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_009943  Dole_0427  two component, sigma54 specific, Fis family transcriptional regulator  37.7 
 
 
458 aa  92.4  2e-18  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_007519  Dde_0695  response regulator receiver domain-containing protein  39.84 
 
 
141 aa  92  2e-18  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.396926  n/a   
 
 
-
 
NC_013173  Dbac_2272  response regulator receiver sensor signal transduction histidine kinase  43.8 
 
 
382 aa  92  2e-18  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.275022  n/a   
 
 
-
 
NC_008554  Sfum_0620  response regulator receiver protein  40 
 
 
142 aa  92.4  2e-18  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_0636  response regulator receiver protein  44.35 
 
 
124 aa  92.4  2e-18  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.621219  normal 
 
 
-
 
NC_008751  Dvul_0403  response regulator receiver sensor signal transduction histidine kinase  40.6 
 
 
374 aa  92.4  2e-18  Desulfovibrio vulgaris DP4  Bacteria  normal  normal  0.150899 
 
 
-
 
NC_011769  DvMF_2334  response regulator receiver protein  42.62 
 
 
151 aa  92  3e-18  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_009943  Dole_2739  two component, sigma54 specific, Fis family transcriptional regulator  37.82 
 
 
451 aa  90.9  5e-18  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.693002  n/a   
 
 
-
 
NC_008554  Sfum_0657  response regulator receiver protein  43.22 
 
 
143 aa  90.9  5e-18  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.771795  normal 
 
 
-
 
NC_009943  Dole_2335  response regulator receiver protein  40.83 
 
 
411 aa  89.7  1e-17  Desulfococcus oleovorans Hxd3  Bacteria  hitchhiker  0.0000388714  n/a   
 
 
-
 
NC_009943  Dole_1358  response regulator receiver protein  35.54 
 
 
144 aa  89.7  1e-17  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.107991  n/a   
 
 
-
 
NC_007498  Pcar_2015  two component hybrid sensor response regulator  41.8 
 
 
391 aa  89.7  1e-17  Pelobacter carbinolicus DSM 2380  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2271  response regulator receiver protein  42.86 
 
 
127 aa  90.1  1e-17  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.420434  n/a   
 
 
-
 
NC_011662  Tmz1t_1843  two component, sigma54 specific, transcriptional regulator, Fis family  39.52 
 
 
465 aa  89.7  1e-17  Thauera sp. MZ1T  Bacteria  normal  0.798265  n/a   
 
 
-
 
NC_008751  Dvul_2827  response regulator receiver protein  40.34 
 
 
137 aa  88.6  3e-17  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_007519  Dde_0327  response regulator receiver domain-containing protein  40.83 
 
 
142 aa  88.2  3e-17  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  n/a   
 
 
-
 
NC_013385  Adeg_0173  two component, sigma54 specific, transcriptional regulator, Fis family  38.02 
 
 
463 aa  87.8  5e-17  Ammonifex degensii KC4  Bacteria  normal  0.127235  n/a   
 
 
-
 
NC_011769  DvMF_1772  response regulator receiver protein  38.89 
 
 
151 aa  87.4  5e-17  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
-
 
NC_008576  Mmc1_3443  response regulator receiver protein  37.9 
 
 
223 aa  87.8  5e-17  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_011883  Ddes_0769  two component, sigma54 specific, transcriptional regulator, Fis family  36 
 
 
453 aa  87.4  6e-17  Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774  Bacteria  normal  0.165448  n/a   
 
 
-
 
NC_013173  Dbac_2269  response regulator receiver protein  38.66 
 
 
130 aa  87  8e-17  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  0.740525  n/a   
 
 
-
 
NC_009943  Dole_1362  response regulator receiver protein  36.59 
 
 
159 aa  87  8e-17  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_008609  Ppro_1655  two component, sigma54 specific, Fis family transcriptional regulator  38.02 
 
 
462 aa  87  8e-17  Pelobacter propionicus DSM 2379  Bacteria  hitchhiker  0.000025661  n/a   
 
 
-
 
NC_008751  Dvul_2853  two component, sigma54 specific, Fis family transcriptional regulator  38.02 
 
 
476 aa  86.7  1e-16  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_008578  Acel_1595  two component transcriptional regulator  38.4 
 
 
227 aa  86.3  1e-16  Acidothermus cellulolyticus 11B  Bacteria  normal  0.526383  normal  0.570373 
 
 
-
 
NC_009338  Mflv_2266  two component transcriptional regulator  40 
 
 
249 aa  85.5  2e-16  Mycobacterium gilvum PYR-GCK  Bacteria  decreased coverage  0.00896474  normal 
 
 
-
 
NC_009523  RoseRS_1088  two component transcriptional regulator  34.15 
 
 
264 aa  85.9  2e-16  Roseiflexus sp. RS-1  Bacteria  normal  normal  0.237646 
 
 
-
 
NC_009767  Rcas_2795  two component transcriptional regulator  32.52 
 
 
266 aa  84.7  3e-16  Roseiflexus castenholzii DSM 13941  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_3286  two component transcriptional regulator, winged helix family  38.1 
 
 
228 aa  85.1  3e-16  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.167791  n/a   
 
 
-
 
NC_008554  Sfum_3268  two component, sigma54 specific, Fis family transcriptional regulator  36.45 
 
 
483 aa  85.1  3e-16  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.474695  normal 
 
 
-
 
NC_013216  Dtox_0789  two component, sigma54 specific, transcriptional regulator, Fis family  34.43 
 
 
448 aa  84.7  4e-16  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  normal 
 
 
-
 
NC_011891  A2cp1_2056  two component, sigma54 specific, transcriptional regulator, Fis family  38.84 
 
 
473 aa  84.7  4e-16  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  0.732718  n/a   
 
 
-
 
NC_002967  TDE1969  sigma-54 dependent transcriptional regulator/response regulator  35.54 
 
 
473 aa  84.7  4e-16  Treponema denticola ATCC 35405  Bacteria  normal  0.440374  n/a   
 
 
-
 
NC_009253  Dred_0323  two component transcriptional regulator  38.71 
 
 
227 aa  84.7  4e-16  Desulfotomaculum reducens MI-1  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_1908  two component, sigma54 specific, Fis family transcriptional regulator  38.84 
 
 
473 aa  84.7  4e-16  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  n/a   
 
 
-
 
NC_011145  AnaeK_1971  two component, sigma54 specific, transcriptional regulator, Fis family  38.84 
 
 
473 aa  84.7  4e-16  Anaeromyxobacter sp. K  Bacteria  normal  0.0887215  n/a   
 
 
-
 
NC_013739  Cwoe_5905  two component transcriptional regulator, winged helix family  39.52 
 
 
237 aa  84.7  4e-16  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_008554  Sfum_0643  two component, sigma54 specific, Fis family transcriptional regulator  35.54 
 
 
478 aa  84.7  4e-16  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_014148  Plim_2084  sigma-54 factor interaction domain-containing protein  35.96 
 
 
477 aa  84.3  5e-16  Planctomyces limnophilus DSM 3776  Bacteria  normal  0.327808  n/a   
 
 
-
 
NC_008009  Acid345_0311  two component transcriptional regulator  37.4 
 
 
232 aa  83.6  8e-16  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.280613 
 
 
-
 
NC_007517  Gmet_2924  two component, sigma54 specific, Fis family transcriptional regulator  36.97 
 
 
470 aa  83.6  9e-16  Geobacter metallireducens GS-15  Bacteria  normal  0.777319  hitchhiker  0.0000000000564278 
 
 
-
 
NC_013223  Dret_0097  two component, sigma54 specific, transcriptional regulator, Fis family  35.65 
 
 
448 aa  83.2  0.000000000000001  Desulfohalobium retbaense DSM 5692  Bacteria  normal  normal 
 
 
-
 
NC_007498  Pcar_2345  two component signal transduction response regulator  35 
 
 
455 aa  82.8  0.000000000000001  Pelobacter carbinolicus DSM 2380  Bacteria  hitchhiker  0.00459366  n/a   
 
 
-
 
NC_013037  Dfer_0856  two component transcriptional regulator, winged helix family  34.78 
 
 
233 aa  82.8  0.000000000000001  Dyadobacter fermentans DSM 18053  Bacteria  normal  normal 
 
 
-
 
NC_009943  Dole_1777  two component, sigma54 specific, Fis family transcriptional regulator  36.44 
 
 
465 aa  82.8  0.000000000000001  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_013205  Aaci_2570  two component transcriptional regulator, winged helix family  38.33 
 
 
239 aa  83.2  0.000000000000001  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_014150  Bmur_0931  response regulator receiver protein  34.96 
 
 
430 aa  83.2  0.000000000000001  Brachyspira murdochii DSM 12563  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_3111  two component, sigma54 specific, Fis family transcriptional regulator  37.4 
 
 
458 aa  82.8  0.000000000000001  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_013385  Adeg_0532  two component, sigma54 specific, transcriptional regulator, Fis family  36.97 
 
 
470 aa  83.2  0.000000000000001  Ammonifex degensii KC4  Bacteria  hitchhiker  0.00706375  n/a   
 
 
-
 
NC_009943  Dole_1341  response regulator receiver protein  37.4 
 
 
301 aa  83.2  0.000000000000001  Desulfococcus oleovorans Hxd3  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_32700  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  35.2 
 
 
271 aa  82.4  0.000000000000002  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.442824  normal  0.485424 
 
 
-
 
NC_009675  Anae109_1798  two component, sigma54 specific, Fis family transcriptional regulator  40.5 
 
 
466 aa  82.4  0.000000000000002  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.634231  normal 
 
 
-
 
NC_007519  Dde_0328  response regulator receiver domain-containing protein  39.82 
 
 
406 aa  82  0.000000000000002  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  normal  0.918345  n/a   
 
 
-
 
NC_011769  DvMF_0823  two component, sigma54 specific, transcriptional regulator, Fis family  33.6 
 
 
456 aa  82.4  0.000000000000002  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.449732 
 
 
-
 
NC_013124  Afer_0558  two component transcriptional regulator, winged helix family  36.8 
 
 
237 aa  82.8  0.000000000000002  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_013173  Dbac_2035  response regulator receiver protein  35.54 
 
 
129 aa  82  0.000000000000002  Desulfomicrobium baculatum DSM 4028  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_2764  two component, sigma54 specific, Fis family transcriptional regulator  35.83 
 
 
466 aa  82.4  0.000000000000002  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_4519  response regulator receiver  43.75 
 
 
234 aa  82.4  0.000000000000002  Nocardioides sp. JS614  Bacteria  normal  0.135212  n/a   
 
 
-
 
NC_008726  Mvan_4429  two component transcriptional regulator  39.13 
 
 
250 aa  82  0.000000000000002  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.133228  normal 
 
 
-
 
CP001637  EcDH1_1438  two component, sigma54 specific, transcriptional regulator, Fis family  37.7 
 
 
461 aa  81.6  0.000000000000003  Escherichia coli DH1  Bacteria  normal  0.445705  n/a   
 
 
-
 
NC_010505  Mrad2831_0204  two component transcriptional regulator  38.33 
 
 
242 aa  81.6  0.000000000000003  Methylobacterium radiotolerans JCM 2831  Bacteria  decreased coverage  0.00392261  normal 
 
 
-
 
NC_008751  Dvul_2822  response regulator receiver protein  38.14 
 
 
135 aa  82  0.000000000000003  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_009800  EcHS_A2361  acetoacetate metabolism regulatory protein AtoC  37.7 
 
 
461 aa  81.6  0.000000000000003  Escherichia coli HS  Bacteria  normal  0.18992  n/a   
 
 
-
 
NC_009800  EcHS_A4238  transcriptional regulatory protein ZraR  36.13 
 
 
441 aa  81.6  0.000000000000003  Escherichia coli HS  Bacteria  normal  0.020936  n/a   
 
 
-
 
NC_007777  Francci3_1155  two component transcriptional regulator  41.82 
 
 
235 aa  81.6  0.000000000000003  Frankia sp. CcI3  Bacteria  normal  0.503115  normal 
 
 
-
 
NC_013595  Sros_6397  response regulator receiver protein  37.1 
 
 
237 aa  82  0.000000000000003  Streptosporangium roseum DSM 43021  Bacteria  normal  0.680662  normal  0.0804167 
 
 
-
 
NC_010814  Glov_1694  two component, sigma54 specific, transcriptional regulator, Fis family  35.2 
 
 
472 aa  82  0.000000000000003  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
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