More than 300 homologs were found in PanDaTox collection
for query gene Afer_0241 on replicon NC_013124
Organism: Acidimicrobium ferrooxidans DSM 10331



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013124  Afer_0241  putative two component transcriptional regulator, winged helix family  100 
 
 		 217 aa  433  1e-120  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  1  n/a   
 
 
-
 
NC_013947  Snas_6372  putative two component transcriptional regulator, winged helix family  44.27 
 
 		 236 aa  136  2e-31  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007333  Tfu_2737  transcriptional regulatory protein  46.63 
 
 		 253 aa  136  3.0000000000000003e-31  Thermobifida fusca YX  Bacteria  normal  1  n/a   
 
 
-
 
NC_009953  Sare_0337  winged helix family two component response transcriptional regulator  52.31 
 
 		 239 aa  135  4e-31  Salinispora arenicola CNS-205  Bacteria  normal  1  normal  0.0279779 
 
 
-
 
NC_009380  Strop_0293  winged helix family two component response transcriptional regulator  52.34 
 
 		 239 aa  135  4e-31  Salinispora tropica CNB-440  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013235  Namu_4983  putative two component transcriptional regulator, winged helix family  53.17 
 
 		 232 aa  135  4e-31  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013170  Ccur_08240  response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein  49.32 
 
 		 236 aa  135  7.000000000000001e-31  Cryptobacterium curtum DSM 15641  Bacteria  normal  0.956318  normal  0.778898 
 
 
-
 
NC_008541  Arth_3012  response regulator receiver protein  52.34 
 
 		 232 aa  135  7.000000000000001e-31  Arthrobacter sp. FB24  Bacteria  normal  0.721979  n/a   
 
 
-
 
NC_011886  Achl_2724  putative two component transcriptional regulator, winged helix family  51.56 
 
 		 232 aa  134  9.999999999999999e-31  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00387379 
 
 
-
 
NC_008699  Noca_4240  transcriptional regulator domain-containing protein  54.96 
 
 		 257 aa  134  1.9999999999999998e-30  Nocardioides sp. JS614  Bacteria  normal  0.466466  n/a   
 
 
-
 
NC_013510  Tcur_0595  putative two component transcriptional regulator, winged helix family  54.26 
 
 		 237 aa  132  3e-30  Thermomonospora curvata DSM 43183  Bacteria  normal  1  n/a   
 
 
-
 
NC_008578  Acel_2025  response regulator receiver protein  53.08 
 
 		 261 aa  132  3e-30  Acidothermus cellulolyticus 11B  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014165  Tbis_0453  putative winged helix family two component transcriptional regulator  51.16 
 
 		 251 aa  132  3.9999999999999996e-30  Thermobispora bispora DSM 43833  Bacteria  normal  0.190844  normal  0.275136 
 
 
-
 
NC_012669  Bcav_3419  putative two component transcriptional regulator, winged helix family  56.25 
 
 		 240 aa  132  5e-30  Beutenbergia cavernae DSM 12333  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013595  Sros_0895  response regulator receiver protein  53.12 
 
 		 237 aa  132  5e-30  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013530  Xcel_3035  putative two component transcriptional regulator, winged helix family  41.44 
 
 		 243 aa  132  6e-30  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  1  n/a   
 
 
-
 
NC_007777  Francci3_0443  response regulator receiver protein  45.56 
 
 		 250 aa  131  6.999999999999999e-30  Frankia sp. CcI3  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009921  Franean1_6176  winged helix family two component response transcriptional regulator  45.56 
 
 		 247 aa  131  9e-30  Frankia sp. EAN1pec  Bacteria  normal  1  normal  0.186762 
 
 
-
 
NC_013521  Sked_04930  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  55.12 
 
 		 249 aa  131  9e-30  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.793732  normal  1 
 
 
-
 
NC_013131  Caci_8253  putative two component transcriptional regulator, winged helix family  50.77 
 
 		 264 aa  130  1.0000000000000001e-29  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009664  Krad_0879  putative two component transcriptional regulator, winged helix family  46.11 
 
 		 259 aa  130  2.0000000000000002e-29  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.249855  hitchhiker  0.00478466 
 
 
-
 
NC_014210  Ndas_4376  putative two component transcriptional regulator, winged helix family  53.54 
 
 		 255 aa  130  2.0000000000000002e-29  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013093  Amir_6823  putative two component transcriptional regulator, winged helix family  45.3 
 
 		 250 aa  129  4.0000000000000003e-29  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_010816  BLD_1194  putative response regulator  63.44 
 
 		 266 aa  129  4.0000000000000003e-29  Bifidobacterium longum DJO10A  Bacteria  normal  1  n/a   
 
 
-
 
NC_014151  Cfla_3090  putative two component transcriptional regulator, winged helix family  63.27 
 
 		 241 aa  128  6e-29  Cellulomonas flavigena DSM 20109  Bacteria  normal  1  hitchhiker  0.0000121276 
 
 
-
 
NC_013165  Shel_19870  response regulator with CheY-like receiver domain and winged-helix DNA-binding domain  50 
 
 		 224 aa  128  7.000000000000001e-29  Slackia heliotrinireducens DSM 20476  Bacteria  normal  0.931606  normal  1 
 
 
-
 
NC_002936  DET1126  transcriptional regulator  45.03 
 
 		 223 aa  127  1.0000000000000001e-28  Dehalococcoides ethenogenes 195  Bacteria  decreased coverage  0.0000289398  n/a   
 
 
-
 
NC_002936  DET1162  transcriptional regulator, putative  34.17 
 
 		 238 aa  126  2.0000000000000002e-28  Dehalococcoides ethenogenes 195  Bacteria  normal  0.829609  n/a   
 
 
-
 
NC_009455  DehaBAV1_0955  two component transcriptional regulator  43.42 
 
 		 223 aa  127  2.0000000000000002e-28  Dehalococcoides sp. BAV1  Bacteria  normal  1  n/a   
 
 
-
 
NC_014158  Tpau_3545  putative two component transcriptional regulator, winged helix family  45.6 
 
 		 243 aa  127  2.0000000000000002e-28  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.61486  n/a   
 
 
-
 
NC_013174  Jden_0439  putative two component transcriptional regulator, winged helix family  41.58 
 
 		 248 aa  126  3e-28  Jonesia denitrificans DSM 20603  Bacteria  normal  1  normal  0.190602 
 
 
-
 
NC_013159  Svir_37670  response regulator with CheY-like receiver domain protein and winged-helix DNA-binding domain protein  51.59 
 
 		 256 aa  125  4.0000000000000003e-28  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  normal  0.0528352 
 
 
-
 
NC_013757  Gobs_4646  putative two component transcriptional regulator, winged helix family  50.37 
 
 		 249 aa  125  5e-28  Geodermatophilus obscurus DSM 43160  Bacteria  normal  1  n/a   
 
 
-
 
NC_007963  Csal_3253  two component transcriptional regulator  42.44 
 
 		 229 aa  123  2e-27  Chromohalobacter salexigens DSM 3043  Bacteria  normal  1  n/a   
 
 
-
 
NC_013552  DhcVS_944  transcriptional regulator  41.46 
 
 		 223 aa  123  2e-27  Dehalococcoides sp. VS  Bacteria  normal  1  n/a   
 
 
-
 
NC_008146  Mmcs_4525  response regulator receiver protein  44 
 
 		 257 aa  122  5e-27  Mycobacterium sp. MCS  Bacteria  normal  1  n/a   
 
 
-
 
NC_010320  Teth514_0588  two component transcriptional regulator  38.65 
 
 		 227 aa  122  5e-27  Thermoanaerobacter sp. X514  Bacteria  unclonable  0.000000000451147  n/a   
 
 
-
 
NC_008705  Mkms_4612  response regulator receiver protein  44 
 
 		 257 aa  122  5e-27  Mycobacterium sp. KMS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009077  Mjls_4908  response regulator receiver protein  44 
 
 		 257 aa  122  5e-27  Mycobacterium sp. JLS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013721  HMPREF0424_0189  transcriptional regulatory protein, C-terminal domain protein  59.14 
 
 		 296 aa  121  7e-27  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  1 
 
 
-
 
NC_009338  Mflv_1650  response regulator receiver protein  43.43 
 
 		 278 aa  121  7e-27  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.0110992  normal  1 
 
 
-
 
NC_008726  Mvan_5097  response regulator receiver protein  43.43 
 
 		 267 aa  121  7e-27  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012034  Athe_0080  two component transcriptional regulator, winged helix family  43.04 
 
 		 230 aa  120  9.999999999999999e-27  Anaerocellum thermophilum DSM 6725  Bacteria  normal  1  n/a   
 
 
-
 
NC_011898  Ccel_3394  two component transcriptional regulator, winged helix family  41.82 
 
 		 230 aa  120  1.9999999999999998e-26  Clostridium cellulolyticum H10  Bacteria  normal  0.103692  n/a   
 
 
-
 
NC_013440  Hoch_6843  putative two component transcriptional regulator, winged helix family  49.21 
 
 		 258 aa  120  1.9999999999999998e-26  Haliangium ochraceum DSM 14365  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013204  Elen_2015  putative two component transcriptional regulator, winged helix family  43.36 
 
 		 224 aa  119  3e-26  Eggerthella lenta DSM 2243  Bacteria  normal  0.0839248  hitchhiker  0.0000000000000188648 
 
 
-
 
NC_009565  TBFG_10833  transcriptional regulatory protein  50 
 
 		 255 aa  119  3.9999999999999996e-26  Mycobacterium tuberculosis F11  Bacteria  normal  1  hitchhiker  0.00597919 
 
 
-
 
NC_013441  Gbro_3935  transcriptional regulator domain protein  59.78 
 
 		 270 aa  118  7e-26  Gordonia bronchialis DSM 43247  Bacteria  normal  1  n/a   
 
 
-
 
NC_012034  Athe_1456  two component transcriptional regulator, winged helix family  41.61 
 
 		 223 aa  118  7.999999999999999e-26  Anaerocellum thermophilum DSM 6725  Bacteria  decreased coverage  0.000183373  n/a   
 
 
-
 
NC_008463  PA14_70750  two-component response regulator PhoB  40.46 
 
 		 229 aa  118  7.999999999999999e-26  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009656  PSPA7_6138  two-component response regulator PhoB  40.46 
 
 		 229 aa  118  7.999999999999999e-26  Pseudomonas aeruginosa PA7  Bacteria  normal  1  n/a   
 
 
-
 
NC_012560  Avin_48520  phosphate regulon response regulator; PhoB  40.46 
 
 		 229 aa  118  7.999999999999999e-26  Azotobacter vinelandii DJ  Bacteria  normal  0.0667889  n/a   
 
 
-
 
NC_009012  Cthe_2333  two component transcriptional regulator  38.55 
 
 		 232 aa  118  7.999999999999999e-26  Clostridium thermocellum ATCC 27405  Bacteria  normal  1  n/a   
 
 
-
 
NC_002947  PP_5320  winged helix family two component transcriptional regulator  40.46 
 
 		 242 aa  117  9e-26  Pseudomonas putida KT2440  Bacteria  normal  1  normal  0.023746 
 
 
-
 
NC_010322  PputGB1_5367  two component transcriptional regulator  40.46 
 
 		 229 aa  117  9.999999999999999e-26  Pseudomonas putida GB-1  Bacteria  normal  1  normal  0.400776 
 
 
-
 
NC_009512  Pput_5228  two component transcriptional regulator  40.46 
 
 		 229 aa  117  9.999999999999999e-26  Pseudomonas putida F1  Bacteria  normal  0.661336  normal  0.450139 
 
 
-
 
NC_010501  PputW619_0154  two component transcriptional regulator  40.46 
 
 		 229 aa  117  9.999999999999999e-26  Pseudomonas putida W619  Bacteria  normal  1  normal  0.596099 
 
 
-
 
NC_009675  Anae109_4159  two component transcriptional regulator  40.59 
 
 		 230 aa  117  9.999999999999999e-26  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  0.667277  normal  0.0359145 
 
 
-
 
NC_009523  RoseRS_2290  two component transcriptional regulator  44.12 
 
 		 224 aa  117  9.999999999999999e-26  Roseiflexus sp. RS-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_014212  Mesil_0841  two component transcriptional regulator, winged helix family  47.68 
 
 		 223 aa  117  9.999999999999999e-26  Meiothermus silvanus DSM 9946  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009012  Cthe_1288  two component transcriptional regulator  39.51 
 
 		 228 aa  117  9.999999999999999e-26  Clostridium thermocellum ATCC 27405  Bacteria  decreased coverage  0.00000000128008  n/a   
 
 
-
 
NC_009253  Dred_1903  two component transcriptional regulator  34.6 
 
 		 230 aa  117  1.9999999999999998e-25  Desulfotomaculum reducens MI-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_010184  BcerKBAB4_1215  two component transcriptional regulator  39.26 
 
 		 223 aa  117  1.9999999999999998e-25  Bacillus weihenstephanensis KBAB4  Bacteria  normal  0.533573  n/a   
 
 
-
 
NC_009439  Pmen_4408  two component transcriptional regulator  39.88 
 
 		 229 aa  117  1.9999999999999998e-25  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  0.0897949 
 
 
-
 
NC_009767  Rcas_2487  two component transcriptional regulator  43.79 
 
 		 224 aa  116  1.9999999999999998e-25  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.431556  normal  1 
 
 
-
 
NC_009674  Bcer98_1021  two component transcriptional regulator  38.65 
 
 		 223 aa  117  1.9999999999999998e-25  Bacillus cytotoxicus NVH 391-98  Bacteria  normal  1  n/a   
 
 
-
 
NC_011725  BCB4264_A1351  DNA-binding response regulator  38.65 
 
 		 223 aa  116  3e-25  Bacillus cereus B4264  Bacteria  normal  1  n/a   
 
 
-
 
NC_004578  PSPTO_5477  phosphate regulon transcriptional regulatory protein PhoB  39.88 
 
 		 229 aa  115  3.9999999999999997e-25  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  1  n/a   
 
 
-
 
NC_011898  Ccel_1658  two component transcriptional regulator, winged helix family  38.27 
 
 		 230 aa  115  3.9999999999999997e-25  Clostridium cellulolyticum H10  Bacteria  normal  0.515101  n/a   
 
 
-
 
NC_013385  Adeg_1011  two component transcriptional regulator, winged helix family  48.03 
 
 		 231 aa  115  3.9999999999999997e-25  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_003910  CPS_1208  phosphate regulon response regulator PhoB  38.86 
 
 		 233 aa  115  6e-25  Colwellia psychrerythraea 34H  Bacteria  normal  1  n/a   
 
 
-
 
NC_007005  Psyr_5032  response regulator receiver:transcriptional regulatory protein, C-terminal  39.88 
 
 		 229 aa  115  6e-25  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  1  normal  0.330128 
 
 
-
 
NC_013385  Adeg_0644  two component transcriptional regulator, winged helix family  45.95 
 
 		 236 aa  115  6e-25  Ammonifex degensii KC4  Bacteria  normal  1  n/a   
 
 
-
 
NC_009718  Fnod_1490  two component transcriptional regulator  36.76 
 
 		 239 aa  115  6e-25  Fervidobacterium nodosum Rt17-B1  Bacteria  unclonable  0.000000000120928  n/a   
 
 
-
 
NC_003909  BCE_1413  DNA-binding response regulator  38.04 
 
 		 223 aa  115  6.9999999999999995e-25  Bacillus cereus ATCC 10987  Bacteria  normal  1  n/a   
 
 
-
 
NC_011658  BCAH187_A1453  DNA-binding response regulator  38.04 
 
 		 223 aa  115  6.9999999999999995e-25  Bacillus cereus AH187  Bacteria  normal  1  n/a   
 
 
-
 
NC_011773  BCAH820_1389  DNA-binding response regulator  38.65 
 
 		 223 aa  114  7.999999999999999e-25  Bacillus cereus AH820  Bacteria  n/a    normal  1 
 
 
-
 
NC_006274  BCZK1193  response regulator  38.65 
 
 		 223 aa  114  7.999999999999999e-25  Bacillus cereus E33L  Bacteria  normal  1  n/a   
 
 
-
 
NC_007519  Dde_2387  two component transcriptional regulator  37.75 
 
 		 229 aa  114  7.999999999999999e-25  Desulfovibrio desulfuricans subsp. desulfuricans str. G20  Bacteria  hitchhiker  0.00115026  n/a   
 
 
-
 
NC_013203  Apar_0432  putative two component transcriptional regulator, winged helix family  48.8 
 
 		 224 aa  114  7.999999999999999e-25  Atopobium parvulum DSM 20469  Bacteria  hitchhiker  0.000490664  normal  1 
 
 
-
 
NC_008261  CPF_2811  DNA-binding response regulator  36.05 
 
 		 228 aa  114  7.999999999999999e-25  Clostridium perfringens ATCC 13124  Bacteria  normal  1  n/a   
 
 
-
 
NC_013946  Mrub_1539  two component transcriptional regulator, winged helix family  44.37 
 
 		 222 aa  114  8.999999999999998e-25  Meiothermus ruber DSM 1279  Bacteria  hitchhiker  0.0000287281  normal  0.103291 
 
 
-
 
NC_011772  BCG9842_B3993  DNA-binding response regulator  38.65 
 
 		 223 aa  114  8.999999999999998e-25  Bacillus cereus G9842  Bacteria  normal  1  normal  0.910988 
 
 
-
 
NC_005945  BAS1213  DNA-binding response regulator  38.65 
 
 		 223 aa  114  1.0000000000000001e-24  Bacillus anthracis str. Sterne  Bacteria  normal  0.203275  n/a   
 
 
-
 
NC_005957  BT9727_1191  response regulator  38.04 
 
 		 223 aa  114  1.0000000000000001e-24  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  1  n/a   
 
 
-
 
NC_011830  Dhaf_3739  two component transcriptional regulator, winged helix family  42.38 
 
 		 230 aa  114  1.0000000000000001e-24  Desulfitobacterium hafniense DCB-2  Bacteria  decreased coverage  0.0000000000466515  n/a   
 
 
-
 
NC_007492  Pfl01_5606  two component transcriptional regulator  39.88 
 
 		 229 aa  114  1.0000000000000001e-24  Pseudomonas fluorescens Pf0-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007530  GBAA_1312  DNA-binding response regulator  38.65 
 
 		 223 aa  114  1.0000000000000001e-24  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  1  n/a   
 
 
-
 
NC_008010  Dgeo_2564  two component transcriptional regulator  44.51 
 
 		 244 aa  114  1.0000000000000001e-24  Deinococcus geothermalis DSM 11300  Bacteria  normal  1  n/a   
 
 
-
 
NC_011146  Gbem_1846  two component transcriptional regulator, winged helix family  39.76 
 
 		 226 aa  114  2.0000000000000002e-24  Geobacter bemidjiensis Bem  Bacteria  normal  1  n/a   
 
 
-
 
NC_011899  Hore_21640  two component transcriptional regulator, winged helix family  40 
 
 		 226 aa  113  2.0000000000000002e-24  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.0000000000176926  n/a   
 
 
-
 
NC_008262  CPR_2497  DNA-binding response regulator  38.31 
 
 		 228 aa  113  2.0000000000000002e-24  Clostridium perfringens SM101  Bacteria  normal  1  n/a   
 
 
-
 
NC_010483  TRQ2_1174  two component transcriptional regulator  39.1 
 
 		 239 aa  113  3e-24  Thermotoga sp. RQ2  Bacteria  normal  0.0181894  n/a   
 
 
-
 
NC_011898  Ccel_1892  two component transcriptional regulator, winged helix family  39.13 
 
 		 228 aa  112  3e-24  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.0000392  n/a   
 
 
-
 
NC_009486  Tpet_1136  two component transcriptional regulator  39.1 
 
 		 239 aa  113  3e-24  Thermotoga petrophila RKU-1  Bacteria  hitchhiker  0.000000652217  n/a   
 
 
-
 
NC_007760  Adeh_0411  two component transcriptional regulator  39.02 
 
 		 230 aa  112  3e-24  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  1  n/a   
 
 
-
 
NC_009616  Tmel_1838  two component transcriptional regulator  36.76 
 
 		 239 aa  113  3e-24  Thermosipho melanesiensis BI429  Bacteria  hitchhiker  0.00000194698  n/a   
 
 
-
 
NC_002977  MCA3105  DNA-binding response regulator PhoB  35.71 
 
 		 232 aa  112  4.0000000000000004e-24  Methylococcus capsulatus str. Bath  Bacteria  normal  1  n/a   
 
 
-
 
NC_009972  Haur_4156  two component transcriptional regulator  41.81 
 
 		 232 aa  112  5e-24  Herpetosiphon aurantiacus ATCC 23779  Bacteria  decreased coverage  0.0000307056  n/a   
 
 
-
 
NC_009012  Cthe_1600  two component transcriptional regulator  39.75 
 
 		 224 aa  112  5e-24  Clostridium thermocellum ATCC 27405  Bacteria  hitchhiker  0.000237714  n/a   
 
 
-
 
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