More than 300 homologs were found in PanDaTox collection
for query gene Snas_6161 on replicon NC_013947
Organism: Stackebrandtia nassauensis DSM 44728



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013947  Snas_6161  methylmalonyl-CoA mutase large subunit  100 
 
 
495 aa  1003    Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013525  Tter_1622  methylmalonyl-CoA mutase, large subunit  50.51 
 
 
521 aa  503  1e-141  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009718  Fnod_1752  methylmalonyl-CoA mutase, large subunit  47.98 
 
 
554 aa  491  1e-137  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_1855  methylmalonyl-CoA mutase, large subunit  49.09 
 
 
560 aa  488  1e-136  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_010718  Nther_1486  methylmalonyl-CoA mutase  47.57 
 
 
559 aa  484  1e-135  Natranaerobius thermophilus JW/NM-WN-LF  Bacteria  normal  normal  0.220657 
 
 
-
 
NC_009616  Tmel_1860  methylmalonyl-CoA mutase, large subunit  47.17 
 
 
559 aa  475  1e-133  Thermosipho melanesiensis BI429  Bacteria  decreased coverage  0.0000937746  n/a   
 
 
-
 
NC_009675  Anae109_0281  methylmalonyl-CoA mutase, large subunit  48.78 
 
 
549 aa  473  1e-132  Anaeromyxobacter sp. Fw109-5  Bacteria  decreased coverage  0.000219849  normal  0.200381 
 
 
-
 
NC_010003  Pmob_0549  methylmalonyl-CoA mutase, large subunit  45.14 
 
 
559 aa  473  1e-132  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_013132  Cpin_6260  methylmalonyl-CoA mutase, large subunit  49.19 
 
 
517 aa  471  1.0000000000000001e-131  Chitinophaga pinensis DSM 2588  Bacteria  normal  normal  0.593051 
 
 
-
 
NC_008148  Rxyl_1283  methylmalonyl-CoA mutase  48.88 
 
 
531 aa  471  1.0000000000000001e-131  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013061  Phep_3607  methylmalonyl-CoA mutase, large subunit  48.37 
 
 
515 aa  466  9.999999999999999e-131  Pedobacter heparinus DSM 2366  Bacteria  normal  normal 
 
 
-
 
NC_009483  Gura_0654  methylmalonyl-CoA mutase, large subunit  46.45 
 
 
551 aa  464  1e-129  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000145738  n/a   
 
 
-
 
NC_009523  RoseRS_0214  methylmalonyl-CoA mutase, large subunit  47.55 
 
 
557 aa  464  1e-129  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_014212  Mesil_1549  methylmalonyl-CoA mutase, large subunit  47.58 
 
 
529 aa  461  1e-129  Meiothermus silvanus DSM 9946  Bacteria  normal  0.815883  normal 
 
 
-
 
NC_014212  Mesil_1720  methylmalonyl-CoA mutase, large subunit  47.24 
 
 
551 aa  460  9.999999999999999e-129  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_011891  A2cp1_0281  methylmalonyl-CoA mutase, large subunit  48.37 
 
 
549 aa  459  9.999999999999999e-129  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  decreased coverage  0.0034305  n/a   
 
 
-
 
NC_011145  AnaeK_0270  methylmalonyl-CoA mutase, large subunit  48.17 
 
 
549 aa  458  9.999999999999999e-129  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_012918  GM21_0572  methylmalonyl-CoA mutase, large subunit  46.11 
 
 
550 aa  459  9.999999999999999e-129  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.0000000000000115409 
 
 
-
 
NC_013440  Hoch_3688  methylmalonyl-CoA mutase, large subunit  48.07 
 
 
537 aa  455  1e-127  Haliangium ochraceum DSM 14365  Bacteria  normal  normal  0.0115893 
 
 
-
 
NC_013926  Aboo_1362  methylmalonyl-CoA mutase, large subunit  45.05 
 
 
559 aa  455  1e-127  Aciduliprofundum boonei T469  Archaea  hitchhiker  0.0000000005041  n/a   
 
 
-
 
NC_002939  GSU3302  methylmalonyl-CoA mutase, putative  47.95 
 
 
552 aa  452  1.0000000000000001e-126  Geobacter sulfurreducens PCA  Bacteria  unclonable  0.00398466  n/a   
 
 
-
 
NC_009767  Rcas_4326  methylmalonyl-CoA mutase, large subunit  46.53 
 
 
563 aa  454  1.0000000000000001e-126  Roseiflexus castenholzii DSM 13941  Bacteria  normal  0.273661  normal 
 
 
-
 
NC_013124  Afer_0726  methylmalonyl-CoA mutase, large subunit  48.98 
 
 
526 aa  454  1.0000000000000001e-126  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_007517  Gmet_3251  methylmalonyl-CoA mutase  47.34 
 
 
552 aa  454  1.0000000000000001e-126  Geobacter metallireducens GS-15  Bacteria  normal  0.34428  hitchhiker  0.00000000000000179062 
 
 
-
 
NC_009483  Gura_3481  methylmalonyl-CoA mutase, large subunit  45.7 
 
 
551 aa  454  1.0000000000000001e-126  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_0259  methylmalonyl-CoA mutase  48.17 
 
 
549 aa  453  1.0000000000000001e-126  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.101753  n/a   
 
 
-
 
NC_008025  Dgeo_0862  methylmalonyl-CoA mutase, alpha subunit  47.65 
 
 
548 aa  452  1.0000000000000001e-126  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal  0.473507 
 
 
-
 
NC_013946  Mrub_0930  methylmalonyl-CoA mutase large subunit  47.69 
 
 
518 aa  454  1.0000000000000001e-126  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.380206 
 
 
-
 
NC_011830  Dhaf_2691  methylmalonyl-CoA mutase, large subunit  46.86 
 
 
545 aa  452  1.0000000000000001e-126  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_013522  Taci_0288  methylmalonyl-CoA mutase, large subunit  46.84 
 
 
559 aa  449  1e-125  Thermanaerovibrio acidaminovorans DSM 6589  Bacteria  normal  n/a   
 
 
-
 
NC_008554  Sfum_0458  methylmalonyl-CoA mutase, large subunit  45.73 
 
 
559 aa  451  1e-125  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  0.484451  normal  0.420898 
 
 
-
 
NC_013947  Snas_0775  methylmalonyl-CoA mutase large subunit  47.06 
 
 
526 aa  450  1e-125  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013743  Htur_1992  methylmalonyl-CoA mutase, large subunit  45.64 
 
 
560 aa  446  1.0000000000000001e-124  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_011831  Cagg_2545  methylmalonyl-CoA mutase, large subunit  47.45 
 
 
564 aa  447  1.0000000000000001e-124  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.80132  normal 
 
 
-
 
NC_008609  Ppro_0523  methylmalonyl-CoA mutase, large subunit  45.84 
 
 
551 aa  446  1.0000000000000001e-124  Pelobacter propionicus DSM 2379  Bacteria  unclonable  0.000000113835  n/a   
 
 
-
 
NC_010085  Nmar_0954  methylmalonyl-CoA mutase large subunit  43.93 
 
 
532 aa  446  1.0000000000000001e-124  Nitrosopumilus maritimus SCM1  Archaea  n/a    hitchhiker  0.00417375 
 
 
-
 
NC_013946  Mrub_0698  methylmalonyl-CoA mutase large subunit  46.63 
 
 
551 aa  442  1e-123  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_012029  Hlac_1016  methylmalonyl-CoA mutase, large subunit  44.83 
 
 
558 aa  442  1e-123  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  0.172359  normal 
 
 
-
 
NC_013922  Nmag_0558  methylmalonyl-CoA mutase, large subunit  46.36 
 
 
560 aa  444  1e-123  Natrialba magadii ATCC 43099  Archaea  normal  n/a   
 
 
-
 
NC_009380  Strop_0832  methylmalonyl-CoA mutase, large subunit  46.86 
 
 
547 aa  444  1e-123  Salinispora tropica CNB-440  Bacteria  normal  0.682429  normal  0.0142114 
 
 
-
 
NC_013131  Caci_0774  methylmalonyl-CoA mutase, large subunit  46.56 
 
 
527 aa  442  1e-123  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.817325  normal  0.286297 
 
 
-
 
NC_009953  Sare_0776  methylmalonyl-CoA mutase, large subunit  46.86 
 
 
527 aa  445  1e-123  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.140535 
 
 
-
 
NC_008009  Acid345_1023  methylmalonyl-CoA mutase  45.44 
 
 
542 aa  441  9.999999999999999e-123  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal  0.85938 
 
 
-
 
NC_013525  Tter_1672  methylmalonyl-CoA mutase, large subunit  45.33 
 
 
570 aa  441  9.999999999999999e-123  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_011145  AnaeK_2026  methylmalonyl-CoA mutase, large subunit  46.73 
 
 
588 aa  437  1e-121  Anaeromyxobacter sp. K  Bacteria  normal  n/a   
 
 
-
 
NC_011891  A2cp1_2096  methylmalonyl-CoA mutase, large subunit  46.94 
 
 
588 aa  437  1e-121  Anaeromyxobacter dehalogenans 2CP-1  Bacteria  normal  n/a   
 
 
-
 
CP001800  Ssol_0229  methylmalonyl-CoA mutase, large subunit  42.45 
 
 
553 aa  435  1e-120  Sulfolobus solfataricus 98/2  Archaea  normal  n/a   
 
 
-
 
NC_013202  Hmuk_2889  methylmalonyl-CoA mutase, large subunit  47.97 
 
 
560 aa  434  1e-120  Halomicrobium mukohataei DSM 12286  Archaea  normal  0.0576126  normal  0.895278 
 
 
-
 
NC_013216  Dtox_1909  methylmalonyl-CoA mutase, large subunit  42.68 
 
 
560 aa  435  1e-120  Desulfotomaculum acetoxidans DSM 771  Bacteria  normal  0.699759  normal  0.051216 
 
 
-
 
NC_013739  Cwoe_0843  methylmalonyl-CoA mutase, large subunit  45.64 
 
 
550 aa  434  1e-120  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.511417 
 
 
-
 
NC_009972  Haur_3380  methylmalonyl-CoA mutase, large subunit  45.1 
 
 
559 aa  435  1e-120  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_007760  Adeh_1834  methylmalonyl-CoA mutase  46.33 
 
 
588 aa  431  1e-119  Anaeromyxobacter dehalogenans 2CP-C  Bacteria  normal  0.243116  n/a   
 
 
-
 
NC_009972  Haur_4552  methylmalonyl-CoA mutase, large subunit  46.53 
 
 
521 aa  430  1e-119  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_2481  methylmalonyl-CoA mutase  44.83 
 
 
565 aa  429  1e-119  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_009253  Dred_1768  methylmalonyl-CoA mutase, large subunit  42.68 
 
 
560 aa  428  1e-119  Desulfotomaculum reducens MI-1  Bacteria  normal  0.0288235  n/a   
 
 
-
 
NC_013739  Cwoe_5523  methylmalonyl-CoA mutase, large subunit  44.94 
 
 
537 aa  428  1e-118  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013202  Hmuk_2165  methylmalonyl-CoA mutase, large subunit  44.4 
 
 
567 aa  422  1e-117  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal 
 
 
-
 
NC_008009  Acid345_1454  methylmalonyl-CoA mutase  44.6 
 
 
599 aa  422  1e-117  Candidatus Koribacter versatilis Ellin345  Bacteria  normal  normal 
 
 
-
 
NC_009440  Msed_0638  methylmalonyl-CoA mutase  42.6 
 
 
553 aa  418  1e-116  Metallosphaera sedula DSM 5348  Archaea  normal  normal  0.187219 
 
 
-
 
NC_009675  Anae109_1988  methylmalonyl-CoA mutase, large subunit  46.12 
 
 
588 aa  420  1e-116  Anaeromyxobacter sp. Fw109-5  Bacteria  normal  normal 
 
 
-
 
NC_012029  Hlac_1182  methylmalonyl-CoA mutase, large subunit  44.15 
 
 
566 aa  420  1e-116  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  hitchhiker  0.00000166 
 
 
-
 
NC_013124  Afer_1791  methylmalonyl-CoA mutase, large subunit  45.6 
 
 
556 aa  416  9.999999999999999e-116  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  0.0908947  n/a   
 
 
-
 
NC_013922  Nmag_0817  methylmalonyl-CoA mutase, large subunit  42.86 
 
 
566 aa  416  9.999999999999999e-116  Natrialba magadii ATCC 43099  Archaea  normal  0.950939  n/a   
 
 
-
 
NC_009921  Franean1_4310  methylmalonyl-CoA mutase, large subunit  44.92 
 
 
525 aa  414  1e-114  Frankia sp. EAN1pec  Bacteria  normal  normal  0.57946 
 
 
-
 
NC_008699  Noca_2131  methylmalonyl-CoA mutase  42.42 
 
 
569 aa  412  1e-114  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_013743  Htur_1102  methylmalonyl-CoA mutase, large subunit  43.49 
 
 
566 aa  411  1e-113  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_013744  Htur_3831  methylmalonyl-CoA mutase, large subunit  41.73 
 
 
566 aa  411  1e-113  Haloterrigena turkmenica DSM 5511  Archaea  normal  n/a   
 
 
-
 
NC_013131  Caci_1274  methylmalonyl-CoA mutase, large subunit  45.89 
 
 
563 aa  409  1e-113  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013440  Hoch_5723  methylmalonyl-CoA mutase, large subunit  43.56 
 
 
543 aa  409  1e-113  Haliangium ochraceum DSM 14365  Bacteria  normal  0.974466  normal 
 
 
-
 
NC_009050  Rsph17029_3657  methylmalonyl-CoA mutase, large subunit  43.03 
 
 
563 aa  409  1e-113  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.748454  normal  0.0699604 
 
 
-
 
NC_008578  Acel_0674  methylmalonyl-CoA mutase  43.8 
 
 
555 aa  405  1.0000000000000001e-112  Acidothermus cellulolyticus 11B  Bacteria  normal  normal 
 
 
-
 
NC_009338  Mflv_2387  methylmalonyl-CoA mutase, large subunit  44.92 
 
 
557 aa  407  1.0000000000000001e-112  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.415653  normal 
 
 
-
 
NC_008726  Mvan_4261  methylmalonyl-CoA mutase, large subunit  45.33 
 
 
529 aa  404  1e-111  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal  0.440573 
 
 
-
 
NC_013744  Htur_4362  methylmalonyl-CoA mutase, large subunit  41.45 
 
 
566 aa  403  1e-111  Haloterrigena turkmenica DSM 5511  Archaea  normal  0.15027  n/a   
 
 
-
 
NC_009621  Smed_5086  methylmalonyl-CoA mutase, large subunit  42.31 
 
 
545 aa  403  1e-111  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_009077  Mjls_3812  methylmalonyl-CoA mutase  45.73 
 
 
548 aa  402  1e-111  Mycobacterium sp. JLS  Bacteria  normal  0.887759  normal  0.207369 
 
 
-
 
NC_013595  Sros_1703  Methylmalonyl-CoA mutase  44.42 
 
 
555 aa  400  9.999999999999999e-111  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.236995 
 
 
-
 
NC_008826  Mpe_B0541  methylmalonyl-CoA mutase  41.94 
 
 
562 aa  399  9.999999999999999e-111  Methylibium petroleiphilum PM1  Bacteria  normal  0.46948  hitchhiker  0.00133344 
 
 
-
 
NC_009717  Xaut_5021  methylmalonyl-CoA mutase, large subunit  41.21 
 
 
562 aa  396  1e-109  Xanthobacter autotrophicus Py2  Bacteria  normal  0.749996  normal 
 
 
-
 
NC_014210  Ndas_0363  methylmalonyl-CoA mutase, large subunit  43.7 
 
 
575 aa  395  1e-109  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_3826  methylmalonyl-CoA mutase  45.53 
 
 
559 aa  397  1e-109  Mycobacterium sp. MCS  Bacteria  normal  0.642912  n/a   
 
 
-
 
NC_009943  Dole_0079  methylmalonyl-CoA mutase  41.62 
 
 
706 aa  397  1e-109  Desulfococcus oleovorans Hxd3  Bacteria  normal  0.373309  n/a   
 
 
-
 
NC_008705  Mkms_3900  methylmalonyl-CoA mutase  45.53 
 
 
548 aa  397  1e-109  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_3099  methylmalonyl-CoA mutase, large subunit  44.79 
 
 
567 aa  392  1e-108  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.000000149706  hitchhiker  0.00000336315 
 
 
-
 
NC_009953  Sare_3989  methylmalonyl-CoA mutase, large subunit  42.86 
 
 
562 aa  392  1e-108  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.000975641 
 
 
-
 
NC_008699  Noca_1802  methylmalonyl-CoA mutase  41.31 
 
 
562 aa  386  1e-106  Nocardioides sp. JS614  Bacteria  normal  0.241911  n/a   
 
 
-
 
NC_013947  Snas_1393  methylmalonyl-CoA mutase large subunit  40.35 
 
 
578 aa  379  1e-104  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_009380  Strop_3608  methylmalonyl-CoA mutase, large subunit  42.37 
 
 
562 aa  381  1e-104  Salinispora tropica CNB-440  Bacteria  normal  0.898932  normal  0.283748 
 
 
-
 
NC_008025  Dgeo_1320  methylmalonyl-CoA mutase  42.04 
 
 
722 aa  379  1e-104  Deinococcus geothermalis DSM 11300  Bacteria  normal  normal 
 
 
-
 
NC_009719  Plav_1702  methylmalonyl-CoA mutase  41.72 
 
 
718 aa  380  1e-104  Parvibaculum lavamentivorans DS-1  Bacteria  normal  normal  0.0321557 
 
 
-
 
NC_014165  Tbis_1920  methylmalonyl-CoA mutase large subunit  43.5 
 
 
720 aa  374  1e-102  Thermobispora bispora DSM 43833  Bacteria  normal  0.0552222  normal  0.617547 
 
 
-
 
NC_008254  Meso_0856  methylmalonyl-CoA mutase  41.92 
 
 
714 aa  373  1e-102  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_012793  GWCH70_2294  methylmalonyl-CoA mutase  40.37 
 
 
731 aa  370  1e-101  Geobacillus sp. WCH70  Bacteria  normal  0.895743  n/a   
 
 
-
 
NC_013595  Sros_3188  Methylmalonyl-CoA mutase  43.35 
 
 
725 aa  370  1e-101  Streptosporangium roseum DSM 43021  Bacteria  normal  0.36577  normal  0.670701 
 
 
-
 
NC_008576  Mmc1_0388  methylmalonyl-CoA mutase  42.16 
 
 
714 aa  370  1e-101  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_010498  EcSMS35_3053  methylmalonyl-CoA mutase  42.5 
 
 
714 aa  369  1e-101  Escherichia coli SMS-3-5  Bacteria  normal  normal 
 
 
-
 
NC_010814  Glov_3260  methylmalonyl-CoA mutase, large subunit  40.61 
 
 
713 aa  370  1e-101  Geobacter lovleyi SZ  Bacteria  normal  n/a   
 
 
-
 
NC_009801  EcE24377A_3244  methylmalonyl-CoA mutase  42.08 
 
 
714 aa  367  1e-100  Escherichia coli E24377A  Bacteria  normal  0.98625  n/a   
 
 
-
 
NC_008347  Mmar10_1119  methylmalonyl-CoA mutase  41.15 
 
 
716 aa  365  1e-100  Maricaulis maris MCS10  Bacteria  normal  normal  0.262731 
 
 
-
 
NC_009049  Rsph17029_0867  methylmalonyl-CoA mutase  40.7 
 
 
709 aa  366  1e-100  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  0.134958  normal 
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>