| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_6161 |
|---|
| Symbol | |
|---|
| ID | 8887383 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | - |
|---|
| Start bp | 6517526 |
|---|
| End bp | 6519013 |
|---|
| Gene Length | 1488 bp |
|---|
| Protein Length | 495 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | methylmalonyl-CoA mutase large subunit |
|---|
| Protein accession | YP_003514877 |
|---|
| Protein GI | 291303599 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAGA AACCAGGCGA GTTCCCTTAC ACCCGAGGCA TCTCCGCACA GGCCAAACCC
TGGATCATGG GCCAGTACGC GGGTTTCGCC ACCGCCGCCG AATCCAACCG CCGCTTCAAG
GAACTCCTCG AGGCCGGACA GACCGGCTTC TCGGTAGCGC TCGATCTGCC CACCCAACTC
GGCCTCGACT CCGACGACCC CAAAGCGCTC GGCGAAGTCG GCCGCGTCGG AGTCGCCATC
GACTCGCTCG CCGACGTCGA AACCCTCATG GACGGCATCC CGCTGGAACG CATCAGCCAG
GTCCGCACCA CCGCCAACTC GATCGGATTC GTCTGGGCCG CACTATGCCT GGCCCTAGCC
CGCCGCCGTG GCGTCGACCC GGGCGACTTC GGCGTCTTCA TCCAAAACGA CGTCCTCAAG
GAATACATCG CGCGCGGCAC CCAGATCTTC CCCGCCGAAC CCGCACTCCG CCTCACAGTA
GACACAATGG AGCACCTCTC CCGCCACGTC CCCGGCTGGG TCCCGCTGGC CATGTCCGGC
TACCACATCG CCGAAGCGGG CGGCGACGAC GCGACCGAGA TCGGCTACAC CTTCGCCAAC
GCGATCGCCT ACCTGGACGA AGCGGTCTCA CGCGGCGTCG ACATCGACCA ACTAGCCCCC
TCCCTCTTCA CCTTCCTGTC GGTCGGCATG GACATCTTCG GCGAAGTCGC CAAACTCCGC
GCCGCCCGCC GAGTCTGGGC CAAACTCGTC ACCGAACGCT ACGGCGCCAA GGACCCCCGC
AGCGCCCAAC TACGCATCTT CGCCTTCACC GCCGGCTCCT CCCTCACGGC CCAACAACCA
CTCAACAACG TCGCCCGCAC CAGCCTCGAA GCCTTCGCGG CAGCCTGCGG CGGCGTCCAA
ACCCTCCACG TGTGCGCCTA CGACGAAGCC CTAGGCGTCC CCACCGCCCA AGCCGCCACC
CTCGCCCTCC GCACCCAACA AATCGTGGCC CACGAAACCG GCTTCGCCGA CATCCCCGAC
CCCCTAGGCG GCTCCTACCT CGTCGAATCC CGCACCGACG ACTGCGAACG CCGCATCCGG
GGCGTCATGG ACGACCTCGC CAACCGGGGC GGAGCCCTGG CGGGCATCGA ATCGGGCTAC
CAACAATCCC GTCTAGCCGA ATCCGCCTAC CGCCAAGCGC GCGAAGTCGA AGAGGGCGAC
CGCATCGTCG TCGGCGTCAA CCGCTGGGCG GCCGACCCCG AACCCCTCGA CGTGTTCCGC
ATCGACCCCG CCGCGGAAGC CGGCCAAGTC AAGGCCCTCC ACCACCTACG CGAAACCCGC
GACTCCCAAG CCGTGGCCAC CACATTGGAC GCCCTCTCCG AAGCCGCCCG CGCGGGCGAC
AACATCGTCC CCTTCTGCGT CGAAGCCGTC GAAGCCTACG CAACCATCGG CGAGATCGTC
GCCCGCCTAC GCGAAGTCCA CGGCAGCTGG ACCCCCACCT CGGAGTAA
|
|---|
| Protein sequence | MTEKPGEFPY TRGISAQAKP WIMGQYAGFA TAAESNRRFK ELLEAGQTGF SVALDLPTQL
GLDSDDPKAL GEVGRVGVAI DSLADVETLM DGIPLERISQ VRTTANSIGF VWAALCLALA
RRRGVDPGDF GVFIQNDVLK EYIARGTQIF PAEPALRLTV DTMEHLSRHV PGWVPLAMSG
YHIAEAGGDD ATEIGYTFAN AIAYLDEAVS RGVDIDQLAP SLFTFLSVGM DIFGEVAKLR
AARRVWAKLV TERYGAKDPR SAQLRIFAFT AGSSLTAQQP LNNVARTSLE AFAAACGGVQ
TLHVCAYDEA LGVPTAQAAT LALRTQQIVA HETGFADIPD PLGGSYLVES RTDDCERRIR
GVMDDLANRG GALAGIESGY QQSRLAESAY RQAREVEEGD RIVVGVNRWA ADPEPLDVFR
IDPAAEAGQV KALHHLRETR DSQAVATTLD ALSEAARAGD NIVPFCVEAV EAYATIGEIV
ARLREVHGSW TPTSE
|
|---|
| |