More than 300 homologs were found in PanDaTox collection
for query gene Snas_0536 on replicon NC_013947
Organism: Stackebrandtia nassauensis DSM 44728



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013947  Snas_0536  transcriptional regulator, LuxR family  100 
 
 
204 aa  415  9.999999999999999e-116  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_4244  two component transcriptional regulator, LuxR family  40.69 
 
 
206 aa  140  1.9999999999999998e-32  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0412084 
 
 
-
 
NC_013131  Caci_3654  two component transcriptional regulator, LuxR family  40.2 
 
 
201 aa  123  2e-27  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.0345388 
 
 
-
 
NC_013595  Sros_4598  response regulator receiver protein  39.61 
 
 
201 aa  121  6e-27  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.053163 
 
 
-
 
NC_008578  Acel_0195  two component LuxR family transcriptional regulator  38.42 
 
 
205 aa  115  3e-25  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.116105 
 
 
-
 
NC_013093  Amir_1937  two component transcriptional regulator, LuxR family  35.29 
 
 
201 aa  108  4.0000000000000004e-23  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_1680  response regulator receiver protein  35.29 
 
 
197 aa  108  7.000000000000001e-23  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.516841 
 
 
-
 
NC_014165  Tbis_0907  LuxR family two component transcriptional regulator  36.27 
 
 
197 aa  108  8.000000000000001e-23  Thermobispora bispora DSM 43833  Bacteria  normal  0.365102  normal 
 
 
-
 
NC_013757  Gobs_1641  two component transcriptional regulator, LuxR family  35.29 
 
 
201 aa  107  2e-22  Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_2068  two component transcriptional regulator, LuxR family  33.5 
 
 
212 aa  107  2e-22  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.385073  normal  0.894995 
 
 
-
 
NC_013739  Cwoe_4753  two component transcriptional regulator, LuxR family  34.8 
 
 
201 aa  106  3e-22  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.226774 
 
 
-
 
NC_013595  Sros_8146  response regulator receiver protein  34.6 
 
 
202 aa  105  4e-22  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.524184 
 
 
-
 
NC_013595  Sros_6441  response regulator receiver protein  34.78 
 
 
227 aa  105  4e-22  Streptosporangium roseum DSM 43021  Bacteria  normal  0.176234  normal  0.0893652 
 
 
-
 
NC_013510  Tcur_2770  two component transcriptional regulator, LuxR family  34.3 
 
 
201 aa  105  5e-22  Thermomonospora curvata DSM 43183  Bacteria  normal  0.282039  n/a   
 
 
-
 
NC_013131  Caci_0763  two component transcriptional regulator, LuxR family  33.33 
 
 
208 aa  103  2e-21  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.313515 
 
 
-
 
NC_014165  Tbis_1720  LuxR family two component transcriptional regulator  35.27 
 
 
201 aa  102  4e-21  Thermobispora bispora DSM 43833  Bacteria  normal  normal 
 
 
-
 
NC_014211  Ndas_5200  two component transcriptional regulator, LuxR family  32.84 
 
 
223 aa  102  5e-21  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.0156716  normal  0.415255 
 
 
-
 
NC_013510  Tcur_3614  two component transcriptional regulator, LuxR family  33.82 
 
 
201 aa  101  8e-21  Thermomonospora curvata DSM 43183  Bacteria  normal  0.765091  n/a   
 
 
-
 
NC_013131  Caci_0691  two component transcriptional regulator, LuxR family  35.79 
 
 
190 aa  100  1e-20  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_03860  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  35.44 
 
 
204 aa  100  2e-20  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0649288  normal  0.281143 
 
 
-
 
NC_009921  Franean1_0528  two component LuxR family transcriptional regulator  37.68 
 
 
201 aa  100  2e-20  Frankia sp. EAN1pec  Bacteria  normal  0.653057  normal 
 
 
-
 
NC_012669  Bcav_1588  two component transcriptional regulator, LuxR family  34.8 
 
 
201 aa  99.4  3e-20  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.117504  normal 
 
 
-
 
NC_013235  Namu_3006  two component transcriptional regulator, LuxR family  33.5 
 
 
204 aa  99  4e-20  Nakamurella multipartita DSM 44233  Bacteria  hitchhiker  0.000248543  hitchhiker  0.000146029 
 
 
-
 
NC_003909  BCE_5482  DNA-binding response regulator  31.86 
 
 
200 aa  98.6  6e-20  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_011725  BCB4264_A5475  DNA-binding response regulator  31.37 
 
 
200 aa  98.2  7e-20  Bacillus cereus B4264  Bacteria  normal  0.132453  n/a   
 
 
-
 
NC_013595  Sros_0091  response regulator receiver protein  33.17 
 
 
204 aa  98.2  8e-20  Streptosporangium roseum DSM 43021  Bacteria  normal  0.520551  normal 
 
 
-
 
NC_005945  BAS5200  DNA-binding response regulator  31.37 
 
 
200 aa  97.8  9e-20  Bacillus anthracis str. Sterne  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A5531  DNA-binding response regulator  31.37 
 
 
200 aa  97.8  9e-20  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_5597  DNA-binding response regulator  31.37 
 
 
200 aa  97.8  9e-20  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_005957  BT9727_5034  DNA-binding response regulator  31.37 
 
 
200 aa  96.7  2e-19  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  0.617082  n/a   
 
 
-
 
NC_012669  Bcav_0286  two component transcriptional regulator, LuxR family  34.3 
 
 
203 aa  96.7  2e-19  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.784033  normal  0.130384 
 
 
-
 
NC_009674  Bcer98_3871  two component LuxR family transcriptional regulator  30.39 
 
 
200 aa  97.1  2e-19  Bacillus cytotoxicus NVH 391-98  Bacteria  hitchhiker  0.00685623  n/a   
 
 
-
 
NC_011773  BCAH820_5444  DNA-binding response regulator  31.37 
 
 
200 aa  96.7  2e-19  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_006274  BCZK5050  DNA-binding response regulator  31.37 
 
 
200 aa  96.3  3e-19  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007333  Tfu_0288  LuxR response regulator receiver  32.35 
 
 
201 aa  96.3  3e-19  Thermobifida fusca YX  Bacteria  normal  0.0935286  n/a   
 
 
-
 
NC_008025  Dgeo_0183  two component LuxR family transcriptional regulator  35.41 
 
 
200 aa  95.5  5e-19  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.541303  normal  0.654013 
 
 
-
 
NC_014210  Ndas_1808  two component transcriptional regulator, LuxR family  38.35 
 
 
201 aa  95.5  5e-19  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.207018 
 
 
-
 
NC_011365  Gdia_1908  two component transcriptional regulator, LuxR family  29.81 
 
 
201 aa  94  2e-18  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal  0.264232 
 
 
-
 
NC_011772  BCG9842_B5477  DNA-binding response regulator  29.9 
 
 
200 aa  93.6  2e-18  Bacillus cereus G9842  Bacteria  hitchhiker  0.00156963  hitchhiker  0.00000000000102018 
 
 
-
 
NC_010184  BcerKBAB4_5150  two component LuxR family transcriptional regulator  29.9 
 
 
200 aa  93.2  3e-18  Bacillus weihenstephanensis KBAB4  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_7316  response regulator receiver protein  34.31 
 
 
201 aa  92.4  4e-18  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013159  Svir_11510  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  32.71 
 
 
203 aa  92.4  4e-18  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.575058  normal 
 
 
-
 
NC_013510  Tcur_2957  two component transcriptional regulator, LuxR family  31.86 
 
 
201 aa  92  5e-18  Thermomonospora curvata DSM 43183  Bacteria  hitchhiker  0.00144362  n/a   
 
 
-
 
NC_013205  Aaci_0655  two component transcriptional regulator, LuxR family  32.54 
 
 
200 aa  91.7  6e-18  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_5628  two component transcriptional regulator, LuxR family  34.31 
 
 
200 aa  91.3  9e-18  Conexibacter woesei DSM 14684  Bacteria  normal  0.946433  normal  0.876589 
 
 
-
 
NC_013947  Snas_4572  two component transcriptional regulator, LuxR family  32.37 
 
 
200 aa  90.9  1e-17  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.318618  normal  0.115695 
 
 
-
 
NC_008347  Mmar10_2543  two component LuxR family transcriptional regulator  33.01 
 
 
202 aa  89.7  2e-17  Maricaulis maris MCS10  Bacteria  normal  0.446643  normal 
 
 
-
 
NC_013159  Svir_01100  response regulator containing a CheY-like receiver domain protein and an HTH DNA-binding domain protein  32.55 
 
 
214 aa  89.4  3e-17  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_4055  response regulator receiver protein  32.84 
 
 
201 aa  89.4  3e-17  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.0367887 
 
 
-
 
NC_014158  Tpau_3534  two component transcriptional regulator, LuxR family  32.38 
 
 
206 aa  89.7  3e-17  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0588  two component transcriptional regulator, LuxR family  34.47 
 
 
204 aa  89  4e-17  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.311075  normal 
 
 
-
 
NC_013521  Sked_06600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  33.98 
 
 
200 aa  89  4e-17  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.680692  normal 
 
 
-
 
NC_011071  Smal_0258  two component transcriptional regulator, LuxR family  31.58 
 
 
200 aa  88.6  6e-17  Stenotrophomonas maltophilia R551-3  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_06340  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  31.02 
 
 
211 aa  87.8  1e-16  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013510  Tcur_1624  two component transcriptional regulator, LuxR family  33.33 
 
 
201 aa  87.8  1e-16  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0305603  n/a   
 
 
-
 
NC_013159  Svir_02200  two component transcriptional regulator, LuxR family  31.58 
 
 
208 aa  87.8  1e-16  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013757  Gobs_4836  two component transcriptional regulator, LuxR family  37.5 
 
 
201 aa  86.7  2e-16  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.16538  n/a   
 
 
-
 
NC_014210  Ndas_1079  two component transcriptional regulator, LuxR family  30.88 
 
 
200 aa  85.5  4e-16  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.782019  normal  0.0499592 
 
 
-
 
NC_013946  Mrub_0806  two component LuxR family transcriptional regulator  30.39 
 
 
216 aa  85.1  6e-16  Meiothermus ruber DSM 1279  Bacteria  normal  normal 
 
 
-
 
NC_013169  Ksed_00990  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  31.86 
 
 
201 aa  83.2  0.000000000000003  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.666199  normal 
 
 
-
 
NC_013947  Snas_0541  two component transcriptional regulator, LuxR family  30.88 
 
 
221 aa  82.4  0.000000000000005  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.318618  normal 
 
 
-
 
NC_014212  Mesil_2510  two component transcriptional regulator, LuxR family  30.1 
 
 
217 aa  81.6  0.000000000000006  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_013946  Mrub_1264  two component LuxR family transcriptional regulator  33.33 
 
 
200 aa  81.6  0.000000000000007  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.86401 
 
 
-
 
NC_008532  STER_1387  DNA-binding response regulator  31.22 
 
 
214 aa  81.6  0.000000000000008  Streptococcus thermophilus LMD-9  Bacteria  hitchhiker  0.00141106  n/a   
 
 
-
 
NC_009523  RoseRS_4258  two component LuxR family transcriptional regulator  29.86 
 
 
216 aa  81.6  0.000000000000008  Roseiflexus sp. RS-1  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_1897  two component transcriptional regulator, LuxR family  30.1 
 
 
200 aa  79.7  0.00000000000002  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.299419  normal 
 
 
-
 
NC_013947  Snas_0503  two component transcriptional regulator, LuxR family  31.28 
 
 
202 aa  80.5  0.00000000000002  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.900292 
 
 
-
 
NC_009953  Sare_2136  two component LuxR family transcriptional regulator  30.56 
 
 
240 aa  78.6  0.00000000000006  Salinispora arenicola CNS-205  Bacteria  normal  normal  0.0154869 
 
 
-
 
NC_011138  MADE_03365  DNA-binding response regulator, LuxR family protein  27.23 
 
 
205 aa  78.2  0.00000000000008  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_008148  Rxyl_2613  two component LuxR family transcriptional regulator  31.07 
 
 
207 aa  77.8  0.00000000000009  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_007912  Sde_3820  two component LuxR family transcriptional regulator  27.88 
 
 
205 aa  77.8  0.0000000000001  Saccharophagus degradans 2-40  Bacteria  normal  0.113202  normal 
 
 
-
 
NC_013174  Jden_0118  two component transcriptional regulator, LuxR family  27.09 
 
 
205 aa  77.4  0.0000000000001  Jonesia denitrificans DSM 20603  Bacteria  normal  0.137239  normal  0.184056 
 
 
-
 
NC_012803  Mlut_16250  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  31.03 
 
 
224 aa  77.8  0.0000000000001  Micrococcus luteus NCTC 2665  Bacteria  normal  0.216822  n/a   
 
 
-
 
NC_014158  Tpau_1410  two component transcriptional regulator, LuxR family  31.73 
 
 
222 aa  76.6  0.0000000000002  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.46664  n/a   
 
 
-
 
NC_009972  Haur_4778  two component LuxR family transcriptional regulator  31.22 
 
 
208 aa  76.6  0.0000000000002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  hitchhiker  0.00000269792  n/a   
 
 
-
 
NC_013595  Sros_4334  response regulator receiver protein  33.33 
 
 
200 aa  76.3  0.0000000000003  Streptosporangium roseum DSM 43021  Bacteria  normal  0.574495  normal  0.636855 
 
 
-
 
NC_013552  DhcVS_601  DNA-binding response regulator, LuxR family  27.65 
 
 
224 aa  76.3  0.0000000000003  Dehalococcoides sp. VS  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_8793  response regulator receiver protein  28.44 
 
 
221 aa  75.9  0.0000000000004  Streptosporangium roseum DSM 43021  Bacteria  normal  0.321987  normal 
 
 
-
 
NC_011663  Sbal223_0355  two component transcriptional regulator, LuxR family  30.17 
 
 
198 aa  75.9  0.0000000000004  Shewanella baltica OS223  Bacteria  normal  0.881439  hitchhiker  0.0000000668977 
 
 
-
 
NC_013530  Xcel_0606  two component transcriptional regulator, LuxR family  29.95 
 
 
212 aa  75.9  0.0000000000004  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_4591  two component LuxR family transcriptional regulator  27.4 
 
 
198 aa  75.9  0.0000000000004  Shewanella woodyi ATCC 51908  Bacteria  normal  unclonable  0.00000001788 
 
 
-
 
NC_009997  Sbal195_0352  two component LuxR family transcriptional regulator  30.17 
 
 
198 aa  75.5  0.0000000000005  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_21600  response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain  30.14 
 
 
222 aa  75.1  0.0000000000007  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.49613  normal 
 
 
-
 
NC_009092  Shew_3506  two component LuxR family transcriptional regulator  27.54 
 
 
198 aa  75.1  0.0000000000007  Shewanella loihica PV-4  Bacteria  normal  normal 
 
 
-
 
NC_009921  Franean1_7117  two component LuxR family transcriptional regulator  29.82 
 
 
214 aa  75.1  0.0000000000007  Frankia sp. EAN1pec  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_0351  LuxR family DNA-binding response regulator  31.11 
 
 
198 aa  74.7  0.0000000000008  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_008345  Sfri_0357  two component transcriptional regulator, LuxR family protein  30.52 
 
 
202 aa  74.7  0.0000000000008  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_010505  Mrad2831_3042  two component LuxR family transcriptional regulator  30.39 
 
 
222 aa  74.7  0.0000000000009  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  normal  0.280021 
 
 
-
 
NC_007644  Moth_0023  two component LuxR family transcriptional regulator  30.56 
 
 
221 aa  74.3  0.000000000001  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.273145  hitchhiker  0.00000136124 
 
 
-
 
NC_008025  Dgeo_0315  two component LuxR family transcriptional regulator  27.18 
 
 
214 aa  74.3  0.000000000001  Deinococcus geothermalis DSM 11300  Bacteria  normal  hitchhiker  0.0084678 
 
 
-
 
NC_009921  Franean1_4979  two component LuxR family transcriptional regulator  30.2 
 
 
231 aa  74.3  0.000000000001  Frankia sp. EAN1pec  Bacteria  normal  0.889239  normal  0.507767 
 
 
-
 
NC_002936  DET0663  LuxR family DNA-binding response regulator  27.65 
 
 
224 aa  73.6  0.000000000002  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_002936  DET0697  LuxR family DNA-binding response regulator  27.65 
 
 
224 aa  73.6  0.000000000002  Dehalococcoides ethenogenes 195  Bacteria  normal  n/a   
 
 
-
 
NC_004116  SAG0322  DNA-binding response regulator  27.86 
 
 
213 aa  73.2  0.000000000002  Streptococcus agalactiae 2603V/R  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_4946  two component transcriptional regulator, LuxR family  28.57 
 
 
224 aa  73.6  0.000000000002  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.13115  normal 
 
 
-
 
NC_013093  Amir_0097  two component transcriptional regulator, LuxR family  30.52 
 
 
209 aa  73.6  0.000000000002  Actinosynnema mirum DSM 43827  Bacteria  normal  0.142871  n/a   
 
 
-
 
NC_011830  Dhaf_1230  two component transcriptional regulator, LuxR family  27.1 
 
 
215 aa  72.8  0.000000000003  Desulfitobacterium hafniense DCB-2  Bacteria  normal  n/a   
 
 
-
 
NC_013757  Gobs_3437  two component transcriptional regulator, LuxR family  30.36 
 
 
248 aa  72.8  0.000000000003  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.39912  n/a   
 
 
-
 
NC_009052  Sbal_0347  two component LuxR family transcriptional regulator  29.61 
 
 
198 aa  73.2  0.000000000003  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_009665  Shew185_0345  two component LuxR family transcriptional regulator  29.61 
 
 
198 aa  73.2  0.000000000003  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
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