Gene Snas_0536 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0536 
Symbol 
ID8881719 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp561722 
End bp562336 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content62% 
IMG OID 
Producttranscriptional regulator, LuxR family 
Protein accessionYP_003509343 
Protein GI291298065 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTGAAA TACTGTATGG ACATGAAAAT ACATTGTGGA GTGAATCTCT GGCTTCGGTG 
CTGTCGCGGG AATCGGACAT CAAGGTAGTC GGAGAGGCCA ATCGCCCGGA CGAGATCCTC
GGGCTGGCAA TGGATTCTCC CCCCGACGTC GTGGTGCTCG CCCTGTATTT AACAGAGGTG
AGCGTTGTGG GCGAACTCTG CCACAAGCTC AGCGAAGGCC CAGGTCAGCA CCGGGTGCTG
GTCCTGCACG AACGTGACAT GCCCCTGGCC CCGTTCGCCG AGGCGTTCCG GTCCTCACCG
AAGGTGAGCT TCATGGGGAC CTGCGCCTCC GCGGCACAGT TCCTGGAGAG CGTCAGGCAG
ATCGCCTGCG GACATCTCGT GATGGATTCG GATGTCGCCC TGGGACTCCT GCGGGCCAAC
CATTCTCCAT TGACGGCACG GGAACGGGAA GTACTCAGCA TCACCCACGG CGGGGCGACG
CCCAAGGAGA TCGCCTCCAA GCTCCAGCTC AGCGTGGGAA CCGTCCGCAA CTACCTGGCC
AACGCCTGCG CCAAACTCGG TGCCCGCAAC CGGATCGAGG CGATCCGGGT CGCGCAGAGC
GCCGGCTGGA TCTAG
 
Protein sequence
MIEILYGHEN TLWSESLASV LSRESDIKVV GEANRPDEIL GLAMDSPPDV VVLALYLTEV 
SVVGELCHKL SEGPGQHRVL VLHERDMPLA PFAEAFRSSP KVSFMGTCAS AAQFLESVRQ
IACGHLVMDS DVALGLLRAN HSPLTARERE VLSITHGGAT PKEIASKLQL SVGTVRNYLA
NACAKLGARN RIEAIRVAQS AGWI