53 homologs were found in PanDaTox collection
for query gene Paes_2257 on replicon NC_011059
Organism: Prosthecochloris aestuarii DSM 271



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011059  Paes_2257  succinate dehydrogenase, cytochrome b556 subunit  100 
 
 		 144 aa  286  1e-76  Prosthecochloris aestuarii DSM 271  Bacteria  normal  0.0160285  normal  1 
 
 
-
 
NC_010831  Cphamn1_2516  succinate dehydrogenase, cytochrome b556 subunit  61.87 
 
 		 154 aa  184  3e-46  Chlorobium phaeobacteroides BS1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013501  Rmar_0208  succinate dehydrogenase, cytochrome b556 subunit  48.15 
 
 		 136 aa  107  8.000000000000001e-23  Rhodothermus marinus DSM 4252  Bacteria  normal  1  n/a   
 
 
-
 
NC_013124  Afer_0188  succinate dehydrogenase, cytochrome b556 subunit  34.75 
 
 		 138 aa  84  6e-16  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  1  n/a   
 
 
-
 
NC_013441  Gbro_1778  succinate dehydrogenase, cytochrome b556 subunit  38.61 
 
 		 139 aa  83.2  0.000000000000001  Gordonia bronchialis DSM 43247  Bacteria  normal  1  n/a   
 
 
-
 
NC_009664  Krad_3952  Succinate dehydrogenase cytochrome b556 subunit  37.11 
 
 		 139 aa  77.4  0.00000000000006  Kineococcus radiotolerans SRS30216  Bacteria  normal  1  normal  0.013264 
 
 
-
 
NC_008541  Arth_1131  succinate dehydrogenase, cytochrome b subunit  36.7 
 
 		 126 aa  77  0.00000000000008  Arthrobacter sp. FB24  Bacteria  normal  1  n/a   
 
 
-
 
NC_012669  Bcav_2950  succinate dehydrogenase, cytochrome b556 subunit  35.51 
 
 		 142 aa  75.1  0.0000000000003  Beutenbergia cavernae DSM 12333  Bacteria  normal  1  hitchhiker  0.000313262 
 
 
-
 
NC_013530  Xcel_0990  succinate dehydrogenase, cytochrome b556 subunit  37.86 
 
 		 126 aa  73.9  0.0000000000007  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.051901  n/a   
 
 
-
 
NC_011886  Achl_1204  succinate dehydrogenase, cytochrome b556 subunit  36 
 
 		 126 aa  73.6  0.0000000000009  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000580451 
 
 
-
 
NC_013521  Sked_25800  succinate dehydrogenase subunit C  35.92 
 
 		 126 aa  72  0.000000000002  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.180508  normal  0.930468 
 
 
-
 
NC_013174  Jden_0821  succinate dehydrogenase, cytochrome b556 subunit  33.98 
 
 		 126 aa  70.5  0.000000000007  Jonesia denitrificans DSM 20603  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013131  Caci_0772  succinate dehydrogenase, cytochrome b556 subunit  38.14 
 
 		 132 aa  70.1  0.000000000009  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  0.200445 
 
 
-
 
NC_013172  Bfae_21310  succinate dehydrogenase subunit C  34.41 
 
 		 125 aa  69.3  0.00000000001  Brachybacterium faecium DSM 4810  Bacteria  normal  1  n/a   
 
 
-
 
NC_014158  Tpau_0967  succinate dehydrogenase, cytochrome b556 subunit  33.01 
 
 		 134 aa  68.6  0.00000000003  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.226571  n/a   
 
 
-
 
NC_007777  Francci3_0681  succinate dehydrogenase, cytochrome b subunit  34.62 
 
 		 131 aa  68.6  0.00000000003  Frankia sp. CcI3  Bacteria  normal  0.414891  normal  0.0350115 
 
 
-
 
NC_013235  Namu_1311  succinate dehydrogenase, cytochrome b556 subunit  33.66 
 
 		 143 aa  67.8  0.00000000005  Nakamurella multipartita DSM 44233  Bacteria  normal  0.454603  normal  1 
 
 
-
 
NC_009338  Mflv_4844  succinate dehydrogenase, cytochrome b subunit  33.64 
 
 		 142 aa  67.8  0.00000000005  Mycobacterium gilvum PYR-GCK  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008705  Mkms_1247  succinate dehydrogenase, cytochrome b subunit  31.75 
 
 		 142 aa  67  0.00000000008  Mycobacterium sp. KMS  Bacteria  normal  0.59332  normal  1 
 
 
-
 
NC_008146  Mmcs_1230  succinate dehydrogenase, cytochrome b subunit  31.75 
 
 		 142 aa  67  0.00000000008  Mycobacterium sp. MCS  Bacteria  normal  0.490436  n/a   
 
 
-
 
NC_009077  Mjls_1256  succinate dehydrogenase, cytochrome b subunit  31.75 
 
 		 142 aa  67  0.00000000008  Mycobacterium sp. JLS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008726  Mvan_1589  succinate dehydrogenase, cytochrome b subunit  33.04 
 
 		 142 aa  67  0.00000000008  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.603867  normal  0.335137 
 
 
-
 
NC_012803  Mlut_04850  succinate dehydrogenase, cytochrome b556 subunit  33.33 
 
 		 134 aa  67  0.00000000009  Micrococcus luteus NCTC 2665  Bacteria  normal  1  n/a   
 
 
-
 
NC_014151  Cfla_1017  succinate dehydrogenase, cytochrome b556 subunit  33.7 
 
 		 132 aa  66.6  0.0000000001  Cellulomonas flavigena DSM 20109  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009050  Rsph17029_3885  succinate dehydrogenase, cytochrome b subunit  37.96 
 
 		 114 aa  66.6  0.0000000001  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  1  normal  0.0570697 
 
 
-
 
NC_007494  RSP_3148  putative succinate dehydrogenase cytochrome b-556 subunit  37.96 
 
 		 114 aa  66.6  0.0000000001  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.80265  n/a   
 
 
-
 
NC_013743  Htur_0933  succinate dehydrogenase, cytochrome b556 subunit  37.37 
 
 		 131 aa  65.5  0.0000000002  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_013093  Amir_6462  succinate dehydrogenase, cytochrome b556 subunit  32.67 
 
 		 140 aa  65.1  0.0000000003  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_008025  Dgeo_0889  succinate dehydrogenase, cytochrome b subunit  36.61 
 
 		 118 aa  63.9  0.0000000007  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.891271  normal  0.65854 
 
 
-
 
NC_013159  Svir_05380  succinate dehydrogenase subunit C  33.68 
 
 		 116 aa  63.5  0.0000000008  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.833154  normal  1 
 
 
-
 
NC_009565  TBFG_13347  succinate dehydrogenase cytochrome B-556 subunit sdhC  37.5 
 
 		 144 aa  62.8  0.000000001  Mycobacterium tuberculosis F11  Bacteria  normal  1  normal  0.262183 
 
 
-
 
NC_007802  Jann_3968  succinate dehydrogenase subunit C  35.11 
 
 		 114 aa  62.4  0.000000002  Jannaschia sp. CCS1  Bacteria  normal  1  normal  0.617218 
 
 
-
 
NC_013525  Tter_0787  succinate dehydrogenase, cytochrome b556 subunit  29.2 
 
 		 119 aa  60.8  0.000000005  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013202  Hmuk_2076  succinate dehydrogenase, cytochrome b556 subunit  38.61 
 
 		 131 aa  60.1  0.00000001  Halomicrobium mukohataei DSM 12286  Archaea  normal  1  normal  1 
 
 
-
 
NC_013158  Huta_2835  succinate dehydrogenase, cytochrome b556 subunit  37.89 
 
 		 129 aa  58.9  0.00000002  Halorhabdus utahensis DSM 12940  Archaea  normal  0.178148  n/a   
 
 
-
 
NC_013922  Nmag_3125  succinate dehydrogenase, cytochrome b556 subunit  35.14 
 
 		 143 aa  59.3  0.00000002  Natrialba magadii ATCC 43099  Archaea  normal  1  n/a   
 
 
-
 
NC_010510  Mrad2831_5987  succinate dehydrogenase cytochrome b subunit  35.9 
 
 		 125 aa  57.8  0.00000005  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.340501  normal  0.95264 
 
 
-
 
NC_012029  Hlac_1987  succinate dehydrogenase, cytochrome b556 subunit  34.23 
 
 		 142 aa  51.6  0.000004  Halorubrum lacusprofundi ATCC 49239  Archaea  normal  0.241729  normal  0.34288 
 
 
-
 
NC_014212  Mesil_1435  succinate dehydrogenase, cytochrome b556 subunit  33.62 
 
 		 123 aa  51.2  0.000005  Meiothermus silvanus DSM 9946  Bacteria  normal  0.362976  normal  1 
 
 
-
 
NC_003295  RSc1996  putative transmembrane succinate dehydrogenase (cytochrome B-556 subunit) oxidoreductase protein  31.45 
 
 		 140 aa  47.8  0.00006  Ralstonia solanacearum GMI1000  Bacteria  normal  0.252521  normal  0.595481 
 
 
-
 
NC_012803  Mlut_04840  succinate dehydrogenase subunit D  29.52 
 
 		 159 aa  45.1  0.0003  Micrococcus luteus NCTC 2665  Bacteria  normal  1  n/a   
 
 
-
 
NC_012856  Rpic12D_1827  succinate dehydrogenase, cytochrome b556 subunit  33.06 
 
 		 136 aa  44.7  0.0004  Ralstonia pickettii 12D  Bacteria  normal  1  normal  0.449633 
 
 
-
 
NC_008541  Arth_1130  succinate dehydrogenase subunit D  24.44 
 
 		 164 aa  44.7  0.0004  Arthrobacter sp. FB24  Bacteria  normal  1  n/a   
 
 
-
 
NC_011886  Achl_1203  putative succinate dehydrogenase, membrane subunit (SdhD)  23.66 
 
 		 153 aa  43.9  0.0007  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.00000167837 
 
 
-
 
NC_010002  Daci_2427  succinate dehydrogenase, cytochrome b556 subunit  31 
 
 		 140 aa  43.1  0.001  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010682  Rpic_2151  succinate dehydrogenase, cytochrome b556 subunit  32.26 
 
 		 136 aa  43.5  0.001  Ralstonia pickettii 12J  Bacteria  normal  0.0654909  normal  1 
 
 
-
 
NC_007404  Tbd_1182  succinate dehydrogenase subunit C  32.56 
 
 		 126 aa  42.7  0.002  Thiobacillus denitrificans ATCC 25259  Bacteria  normal  0.615812  normal  1 
 
 
-
 
NC_010531  Pnec_1063  succinate dehydrogenase, cytochrome b556 subunit  31.34 
 
 		 139 aa  42.7  0.002  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  0.478298  normal  0.0346438 
 
 
-
 
NC_007963  Csal_1213  succinate dehydrogenase subunit C  35.11 
 
 		 125 aa  42.4  0.002  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.101411  n/a   
 
 
-
 
NC_008740  Maqu_1151  succinate dehydrogenase, hydrophobic anchor subunit  28.32 
 
 		 113 aa  42  0.003  Marinobacter aquaeolei VT8  Bacteria  normal  1  n/a   
 
 
-
 
NC_011892  Mnod_8671  succinate dehydrogenase, cytochrome b subunit  29.76 
 
 		 115 aa  41.2  0.005  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_013889  TK90_1880  succinate dehydrogenase, cytochrome b556 subunit  30.21 
 
 		 126 aa  40.8  0.006  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.082633  normal  1 
 
 
-
 
NC_014158  Tpau_0966  succinate dehydrogenase cytochrome b subunit  28.3 
 
 		 155 aa  40.4  0.008  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.151331  n/a   
 
 
-
 
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