| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcav_2950 |
|---|
| Symbol | |
|---|
| ID | 7861369 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Beutenbergia cavernae DSM 12333 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012669 |
|---|
| Strand | + |
|---|
| Start bp | 3292367 |
|---|
| End bp | 3292795 |
|---|
| Gene Length | 429 bp |
|---|
| Protein Length | 142 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 643867048 |
|---|
| Product | succinate dehydrogenase, cytochrome b556 subunit |
|---|
| Protein accession | YP_002882957 |
|---|
| Protein GI | 229821431 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2009] Succinate dehydrogenase/fumarate reductase, cytochrome b subunit |
|---|
| TIGRFAM ID | [TIGR02970] succinate dehydrogenase, cytochrome b556 subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.000313262 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGGCCACAG CGCCGACCAC ACCGCCGCCG CCGACGCCTA CCTCGTCGCG GGAGGTGGGG
ACCGGGACGC TGTACCGCGG CCGTGAGGGC ATGTGGTCCT GGGTGCTCCA CCGGGTCACG
GGGATGCTCA TCTTCCTGTT CCTGCTGGTG CACGTGCTGG ACACGGCGCT CGTGCGCGTG
TCGCCCGAGG CGTACAACTC CGTCATCGGG CACTACAAGA CGCCGATCAT GGGCCTGGGC
GAGGCCGGGC TCGTCGCGGC GATCCTGTTC CACGCGTTCA ACGGCGTGCG GATCATCCTC
GTGGACTTCT GGGCGAAGGG CCCGAAGTAC CAGCGGCTCA TGATGTGGAT CGTCATCGGC
CTCGCCGTCG TGCTGTTCGC CGGGTTCCTG CCCCGCCACC TGATGAACGT GTTCGGAGGG
GGGCACTGA
|
|---|
| Protein sequence | MATAPTTPPP PTPTSSREVG TGTLYRGREG MWSWVLHRVT GMLIFLFLLV HVLDTALVRV
SPEAYNSVIG HYKTPIMGLG EAGLVAAILF HAFNGVRIIL VDFWAKGPKY QRLMMWIVIG
LAVVLFAGFL PRHLMNVFGG GH
|
|---|
| |