41 homologs were found in PanDaTox collection
for query gene Bcav_2950 on replicon NC_012669
Organism: Beutenbergia cavernae DSM 12333



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_012669  Bcav_2950  succinate dehydrogenase, cytochrome b556 subunit  100 
 
 		 142 aa  285  2e-76  Beutenbergia cavernae DSM 12333  Bacteria  normal  1  hitchhiker  0.000313262 
 
 
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NC_013174  Jden_0821  succinate dehydrogenase, cytochrome b556 subunit  84.17 
 
 		 126 aa  212  9.999999999999999e-55  Jonesia denitrificans DSM 20603  Bacteria  normal  1  normal  1 
 
 
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NC_013521  Sked_25800  succinate dehydrogenase subunit C  85.83 
 
 		 126 aa  212  1.9999999999999998e-54  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.180508  normal  0.930468 
 
 
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NC_013530  Xcel_0990  succinate dehydrogenase, cytochrome b556 subunit  80.49 
 
 		 126 aa  202  2e-51  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.051901  n/a   
 
 
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NC_014151  Cfla_1017  succinate dehydrogenase, cytochrome b556 subunit  74.29 
 
 		 132 aa  202  2e-51  Cellulomonas flavigena DSM 20109  Bacteria  normal  1  normal  1 
 
 
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NC_013172  Bfae_21310  succinate dehydrogenase subunit C  78.15 
 
 		 125 aa  186  9e-47  Brachybacterium faecium DSM 4810  Bacteria  normal  1  n/a   
 
 
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NC_009664  Krad_3952  Succinate dehydrogenase cytochrome b556 subunit  66.67 
 
 		 139 aa  182  9e-46  Kineococcus radiotolerans SRS30216  Bacteria  normal  1  normal  0.013264 
 
 
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NC_008541  Arth_1131  succinate dehydrogenase, cytochrome b subunit  72.27 
 
 		 126 aa  176  7e-44  Arthrobacter sp. FB24  Bacteria  normal  1  n/a   
 
 
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NC_011886  Achl_1204  succinate dehydrogenase, cytochrome b556 subunit  71.67 
 
 		 126 aa  175  2e-43  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000580451 
 
 
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NC_013131  Caci_0772  succinate dehydrogenase, cytochrome b556 subunit  62.4 
 
 		 132 aa  164  2.9999999999999998e-40  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  0.200445 
 
 
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NC_012803  Mlut_04850  succinate dehydrogenase, cytochrome b556 subunit  62.88 
 
 		 134 aa  164  2.9999999999999998e-40  Micrococcus luteus NCTC 2665  Bacteria  normal  1  n/a   
 
 
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NC_013441  Gbro_1778  succinate dehydrogenase, cytochrome b556 subunit  58.73 
 
 		 139 aa  160  4.0000000000000004e-39  Gordonia bronchialis DSM 43247  Bacteria  normal  1  n/a   
 
 
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NC_009338  Mflv_4844  succinate dehydrogenase, cytochrome b subunit  60.32 
 
 		 142 aa  160  5.0000000000000005e-39  Mycobacterium gilvum PYR-GCK  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008705  Mkms_1247  succinate dehydrogenase, cytochrome b subunit  60.16 
 
 		 142 aa  160  8.000000000000001e-39  Mycobacterium sp. KMS  Bacteria  normal  0.59332  normal  1 
 
 
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NC_008146  Mmcs_1230  succinate dehydrogenase, cytochrome b subunit  60.16 
 
 		 142 aa  160  8.000000000000001e-39  Mycobacterium sp. MCS  Bacteria  normal  0.490436  n/a   
 
 
-
 
NC_009077  Mjls_1256  succinate dehydrogenase, cytochrome b subunit  60.16 
 
 		 142 aa  160  8.000000000000001e-39  Mycobacterium sp. JLS  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008726  Mvan_1589  succinate dehydrogenase, cytochrome b subunit  59.84 
 
 		 142 aa  159  1e-38  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.603867  normal  0.335137 
 
 
-
 
NC_007777  Francci3_0681  succinate dehydrogenase, cytochrome b subunit  60.68 
 
 		 131 aa  155  1e-37  Frankia sp. CcI3  Bacteria  normal  0.414891  normal  0.0350115 
 
 
-
 
NC_013235  Namu_1311  succinate dehydrogenase, cytochrome b556 subunit  56.12 
 
 		 143 aa  151  2.9999999999999998e-36  Nakamurella multipartita DSM 44233  Bacteria  normal  0.454603  normal  1 
 
 
-
 
NC_009565  TBFG_13347  succinate dehydrogenase cytochrome B-556 subunit sdhC  60.53 
 
 		 144 aa  150  8e-36  Mycobacterium tuberculosis F11  Bacteria  normal  1  normal  0.262183 
 
 
-
 
NC_013093  Amir_6462  succinate dehydrogenase, cytochrome b556 subunit  60.66 
 
 		 140 aa  147  3e-35  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
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NC_013159  Svir_05380  succinate dehydrogenase subunit C  59.48 
 
 		 116 aa  139  9.999999999999999e-33  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.833154  normal  1 
 
 
-
 
NC_014158  Tpau_0967  succinate dehydrogenase, cytochrome b556 subunit  57.94 
 
 		 134 aa  135  2e-31  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.226571  n/a   
 
 
-
 
NC_013525  Tter_0787  succinate dehydrogenase, cytochrome b556 subunit  47.06 
 
 		 119 aa  107  6e-23  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013124  Afer_0188  succinate dehydrogenase, cytochrome b556 subunit  38.02 
 
 		 138 aa  99.4  1e-20  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  1  n/a   
 
 
-
 
NC_008025  Dgeo_0889  succinate dehydrogenase, cytochrome b subunit  41.58 
 
 		 118 aa  87.8  4e-17  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.891271  normal  0.65854 
 
 
-
 
NC_010831  Cphamn1_2516  succinate dehydrogenase, cytochrome b556 subunit  32.46 
 
 		 154 aa  73.9  0.0000000000007  Chlorobium phaeobacteroides BS1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013501  Rmar_0208  succinate dehydrogenase, cytochrome b556 subunit  40.21 
 
 		 136 aa  73.9  0.0000000000007  Rhodothermus marinus DSM 4252  Bacteria  normal  1  n/a   
 
 
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NC_014212  Mesil_1435  succinate dehydrogenase, cytochrome b556 subunit  42 
 
 		 123 aa  72  0.000000000002  Meiothermus silvanus DSM 9946  Bacteria  normal  0.362976  normal  1 
 
 
-
 
NC_011059  Paes_2257  succinate dehydrogenase, cytochrome b556 subunit  34.38 
 
 		 144 aa  72  0.000000000003  Prosthecochloris aestuarii DSM 271  Bacteria  normal  0.0160285  normal  1 
 
 
-
 
NC_013743  Htur_0933  succinate dehydrogenase, cytochrome b556 subunit  36.49 
 
 		 131 aa  56.6  0.0000001  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_013158  Huta_2835  succinate dehydrogenase, cytochrome b556 subunit  35.8 
 
 		 129 aa  52.8  0.000001  Halorhabdus utahensis DSM 12940  Archaea  normal  0.178148  n/a   
 
 
-
 
NC_012803  Mlut_04840  succinate dehydrogenase subunit D  28.89 
 
 		 159 aa  47  0.00008  Micrococcus luteus NCTC 2665  Bacteria  normal  1  n/a   
 
 
-
 
NC_013202  Hmuk_2076  succinate dehydrogenase, cytochrome b556 subunit  37.66 
 
 		 131 aa  45.8  0.0002  Halomicrobium mukohataei DSM 12286  Archaea  normal  1  normal  1 
 
 
-
 
NC_013922  Nmag_3125  succinate dehydrogenase, cytochrome b556 subunit  33.72 
 
 		 143 aa  46.2  0.0002  Natrialba magadii ATCC 43099  Archaea  normal  1  n/a   
 
 
-
 
NC_009050  Rsph17029_3885  succinate dehydrogenase, cytochrome b subunit  30 
 
 		 114 aa  42.7  0.002  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  1  normal  0.0570697 
 
 
-
 
NC_007802  Jann_3968  succinate dehydrogenase subunit C  28.57 
 
 		 114 aa  42.4  0.002  Jannaschia sp. CCS1  Bacteria  normal  1  normal  0.617218 
 
 
-
 
NC_007494  RSP_3148  putative succinate dehydrogenase cytochrome b-556 subunit  30 
 
 		 114 aa  42.7  0.002  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.80265  n/a   
 
 
-
 
NC_009483  Gura_3257  succinate dehydrogenase/fumarate reductase cytochrome b subunit  30.77 
 
 		 219 aa  42  0.003  Geobacter uraniireducens Rf4  Bacteria  hitchhiker  0.000000103645  n/a   
 
 
-
 
NC_002976  SERP0730  succinate dehydrogenase, cytochrome b558 subunit  26.85 
 
 		 204 aa  40.8  0.006  Staphylococcus epidermidis RP62A  Bacteria  normal  0.545164  n/a   
 
 
-
 
NC_009440  Msed_1113  succinate dehydrogenase, cytochrome b subunit  25.89 
 
 		 133 aa  41.2  0.006  Metallosphaera sedula DSM 5348  Archaea  normal  0.405795  normal  1 
 
 
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