| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmcs_1230 |
|---|
| Symbol | |
|---|
| ID | 4110067 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Mycobacterium sp. MCS |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008146 |
|---|
| Strand | - |
|---|
| Start bp | 1329008 |
|---|
| End bp | 1329436 |
|---|
| Gene Length | 429 bp |
|---|
| Protein Length | 142 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 638030351 |
|---|
| Product | succinate dehydrogenase, cytochrome b subunit |
|---|
| Protein accession | YP_638398 |
|---|
| Protein GI | 108798201 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2009] Succinate dehydrogenase/fumarate reductase, cytochrome b subunit |
|---|
| TIGRFAM ID | [TIGR02970] succinate dehydrogenase, cytochrome b556 subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.490436 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTACTG CGACAACAGC GGATACCGAC GTTCCGTCGC CGCGAGACAA ACCATCCCGC
CGCCGCACCC TCTACCGCGG CGACCCCGGG ATGTGGTCGT GGGTGCTGCA CCGCATCTCC
GGTGCGGCGA TCTTCTTCTT CCTGTTCGTC CACGTCGTCG ACACGGCGTT GGTGCGGGTC
AGTCCCGAGG CCTACAACGC CGTCATCGAG ACCTACAAGA CTCCGATCAT CGGACTGATG
GAGATCGGCC TGGTCGGCGC GGTGCTCTAC CACGCACTCA ACGGCATCCG CGTCATCCTG
ATCGACTTCT GGTCCAAGGG CGCGCGCTAC CAGCGGCAGA TGCTGTGGGT CGTGGCGGGC
GTGTTCATCA CAGTCATGAT CGCGTCGCTC GGCGTGATCG GCATGCACAT GGCGGAGCGA
TTCCTATGA
|
|---|
| Protein sequence | MSTATTADTD VPSPRDKPSR RRTLYRGDPG MWSWVLHRIS GAAIFFFLFV HVVDTALVRV
SPEAYNAVIE TYKTPIIGLM EIGLVGAVLY HALNGIRVIL IDFWSKGARY QRQMLWVVAG
VFITVMIASL GVIGMHMAER FL
|
|---|
| |