34 homologs were found in PanDaTox collection
for query gene Dgeo_0889 on replicon NC_008025
Organism: Deinococcus geothermalis DSM 11300



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_008025  Dgeo_0889  succinate dehydrogenase, cytochrome b subunit  100 
 
 		 118 aa  231  2.0000000000000002e-60  Deinococcus geothermalis DSM 11300  Bacteria  normal  0.891271  normal  0.65854 
 
 
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NC_014212  Mesil_1435  succinate dehydrogenase, cytochrome b556 subunit  50.43 
 
 		 123 aa  114  5e-25  Meiothermus silvanus DSM 9946  Bacteria  normal  0.362976  normal  1 
 
 
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NC_013525  Tter_0787  succinate dehydrogenase, cytochrome b556 subunit  45.37 
 
 		 119 aa  105  2e-22  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
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NC_011886  Achl_1204  succinate dehydrogenase, cytochrome b556 subunit  43.22 
 
 		 126 aa  95.1  3e-19  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.000000580451 
 
 
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NC_008541  Arth_1131  succinate dehydrogenase, cytochrome b subunit  46.53 
 
 		 126 aa  93.2  1e-18  Arthrobacter sp. FB24  Bacteria  normal  1  n/a   
 
 
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NC_013521  Sked_25800  succinate dehydrogenase subunit C  43.14 
 
 		 126 aa  88.6  3e-17  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.180508  normal  0.930468 
 
 
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NC_009077  Mjls_1256  succinate dehydrogenase, cytochrome b subunit  43.88 
 
 		 142 aa  87.8  5e-17  Mycobacterium sp. JLS  Bacteria  normal  1  normal  1 
 
 
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NC_008146  Mmcs_1230  succinate dehydrogenase, cytochrome b subunit  43.88 
 
 		 142 aa  87.8  5e-17  Mycobacterium sp. MCS  Bacteria  normal  0.490436  n/a   
 
 
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NC_008705  Mkms_1247  succinate dehydrogenase, cytochrome b subunit  43.88 
 
 		 142 aa  87.8  5e-17  Mycobacterium sp. KMS  Bacteria  normal  0.59332  normal  1 
 
 
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NC_014151  Cfla_1017  succinate dehydrogenase, cytochrome b556 subunit  46.15 
 
 		 132 aa  87.8  5e-17  Cellulomonas flavigena DSM 20109  Bacteria  normal  1  normal  1 
 
 
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NC_013530  Xcel_0990  succinate dehydrogenase, cytochrome b556 subunit  45.54 
 
 		 126 aa  87.8  5e-17  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.051901  n/a   
 
 
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NC_013174  Jden_0821  succinate dehydrogenase, cytochrome b556 subunit  41.18 
 
 		 126 aa  87.4  6e-17  Jonesia denitrificans DSM 20603  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012669  Bcav_2950  succinate dehydrogenase, cytochrome b556 subunit  41.58 
 
 		 142 aa  86.7  1e-16  Beutenbergia cavernae DSM 12333  Bacteria  normal  1  hitchhiker  0.000313262 
 
 
-
 
NC_013441  Gbro_1778  succinate dehydrogenase, cytochrome b556 subunit  40.59 
 
 		 139 aa  86.7  1e-16  Gordonia bronchialis DSM 43247  Bacteria  normal  1  n/a   
 
 
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NC_013172  Bfae_21310  succinate dehydrogenase subunit C  42.55 
 
 		 125 aa  82.4  0.000000000000002  Brachybacterium faecium DSM 4810  Bacteria  normal  1  n/a   
 
 
-
 
NC_009338  Mflv_4844  succinate dehydrogenase, cytochrome b subunit  40.57 
 
 		 142 aa  81.6  0.000000000000003  Mycobacterium gilvum PYR-GCK  Bacteria  normal  1  normal  1 
 
 
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NC_009664  Krad_3952  Succinate dehydrogenase cytochrome b556 subunit  38.18 
 
 		 139 aa  80.9  0.000000000000005  Kineococcus radiotolerans SRS30216  Bacteria  normal  1  normal  0.013264 
 
 
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NC_013124  Afer_0188  succinate dehydrogenase, cytochrome b556 subunit  37.84 
 
 		 138 aa  80.9  0.000000000000006  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  1  n/a   
 
 
-
 
NC_008726  Mvan_1589  succinate dehydrogenase, cytochrome b subunit  38.78 
 
 		 142 aa  80.1  0.00000000000001  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  0.603867  normal  0.335137 
 
 
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NC_012803  Mlut_04850  succinate dehydrogenase, cytochrome b556 subunit  38.14 
 
 		 134 aa  79  0.00000000000002  Micrococcus luteus NCTC 2665  Bacteria  normal  1  n/a   
 
 
-
 
NC_013131  Caci_0772  succinate dehydrogenase, cytochrome b556 subunit  39.8 
 
 		 132 aa  79.3  0.00000000000002  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  0.200445 
 
 
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NC_007777  Francci3_0681  succinate dehydrogenase, cytochrome b subunit  37.62 
 
 		 131 aa  78.6  0.00000000000003  Frankia sp. CcI3  Bacteria  normal  0.414891  normal  0.0350115 
 
 
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NC_013235  Namu_1311  succinate dehydrogenase, cytochrome b556 subunit  36.73 
 
 		 143 aa  74.3  0.0000000000005  Nakamurella multipartita DSM 44233  Bacteria  normal  0.454603  normal  1 
 
 
-
 
NC_014158  Tpau_0967  succinate dehydrogenase, cytochrome b556 subunit  37.89 
 
 		 134 aa  73.6  0.0000000000009  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.226571  n/a   
 
 
-
 
NC_013093  Amir_6462  succinate dehydrogenase, cytochrome b556 subunit  32.17 
 
 		 140 aa  72.8  0.000000000001  Actinosynnema mirum DSM 43827  Bacteria  normal  1  n/a   
 
 
-
 
NC_009565  TBFG_13347  succinate dehydrogenase cytochrome B-556 subunit sdhC  37.36 
 
 		 144 aa  72.4  0.000000000002  Mycobacterium tuberculosis F11  Bacteria  normal  1  normal  0.262183 
 
 
-
 
NC_013159  Svir_05380  succinate dehydrogenase subunit C  31.43 
 
 		 116 aa  69.3  0.00000000002  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.833154  normal  1 
 
 
-
 
NC_013501  Rmar_0208  succinate dehydrogenase, cytochrome b556 subunit  41.76 
 
 		 136 aa  68.6  0.00000000003  Rhodothermus marinus DSM 4252  Bacteria  normal  1  n/a   
 
 
-
 
NC_010831  Cphamn1_2516  succinate dehydrogenase, cytochrome b556 subunit  33.98 
 
 		 154 aa  63.5  0.0000000009  Chlorobium phaeobacteroides BS1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013158  Huta_2835  succinate dehydrogenase, cytochrome b556 subunit  35.29 
 
 		 129 aa  57.4  0.00000006  Halorhabdus utahensis DSM 12940  Archaea  normal  0.178148  n/a   
 
 
-
 
NC_011059  Paes_2257  succinate dehydrogenase, cytochrome b556 subunit  35.79 
 
 		 144 aa  53.5  0.000001  Prosthecochloris aestuarii DSM 271  Bacteria  normal  0.0160285  normal  1 
 
 
-
 
NC_013743  Htur_0933  succinate dehydrogenase, cytochrome b556 subunit  28.7 
 
 		 131 aa  52.4  0.000002  Haloterrigena turkmenica DSM 5511  Archaea  n/a    n/a   
 
 
-
 
NC_013202  Hmuk_2076  succinate dehydrogenase, cytochrome b556 subunit  30.43 
 
 		 131 aa  48.1  0.00004  Halomicrobium mukohataei DSM 12286  Archaea  normal  1  normal  1 
 
 
-
 
NC_013922  Nmag_3125  succinate dehydrogenase, cytochrome b556 subunit  26.55 
 
 		 143 aa  41.6  0.004  Natrialba magadii ATCC 43099  Archaea  normal  1  n/a   
 
 
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